HEADER SIGNALING PROTEIN 12-MAY-14 2MP6 OBSLTE 29-JUL-15 2MP6 2N34 TITLE STRUCTURE AND FUNCTION OF THE JAK INTERACTION REGION IN THE TITLE 2 INTRINSICALLY DISORDERED N-TERMINUS OF SOCS5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR OF CYTOKINE SIGNALING 5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: JAK INTERACTION REGION, UNP RESIDUES 175-244; COMPND 5 SYNONYM: SOCS-5, CYTOKINE-INDUCIBLE SH2-CONTAINING PROTEIN 5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SOCS5, CISH5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTAGAMI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX2T KEYWDS CYTOKINE SIGNALLING SUPPRESSOR, JAK INTERACTION REGION, INTRINSICALLY KEYWDS 2 UNSTRUCTURED PROTEIN, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.R.CHANDRASHEKARAN,B.MOHANTY,E.M.LINOSSI,L.F.DAGLEY,J.M.MURPHY, AUTHOR 2 S.E.NICHOLSON,J.J.BABON,R.S.NORTON REVDAT 2 29-JUL-15 2MP6 1 OBSLTE REVDAT 1 20-MAY-15 2MP6 0 JRNL AUTH I.R.CHANDRASHEKARAN,B.MOHANTY,E.M.LINOSSI,L.F.DAGLEY, JRNL AUTH 2 E.W.W.LEUNG,J.M.MURPHY,J.J.BABON,S.E.NICHOLSON,R.S.NORTON JRNL TITL STRUCTURE AND FUNCTION OF THE JAK INTERACTION REGION IN THE JRNL TITL 2 INTRINSICALLY DISORDERED N-TERMINUS OF SOCS5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPALP, CYANA REMARK 3 AUTHORS : LUGINBUHL, GUNTERT, BILLETER AND WUTHRICH (OPALP), REMARK 3 (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAY-14. REMARK 100 THE RCSB ID CODE IS RCSB103884. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 0.02 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.3 MM [U-100% 13C; U-100% 15N] REMARK 210 SOCS5 JIR-1, 5 MM TCEP-2, 20 MM REMARK 210 SODIUM CITRATE-3, 0.02 % SODIUM REMARK 210 AZIDE-4, 6 % [U-100% 2H] D2O-5, REMARK 210 94 % H2O-6, 94% H2O/6% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HNCO; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HBHA(CO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.2, NMRPIPE 3.0, REMARK 210 NMRVIEW V8.2.33, CARA, TALOS, REMARK 210 SPARKY, CYANA 3.0, CANDID REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 182 14.96 48.62 REMARK 500 1 THR A 184 12.83 -155.79 REMARK 500 1 VAL A 185 -4.85 49.35 REMARK 500 1 ARG A 192 -62.18 -155.27 REMARK 500 1 THR A 193 80.25 45.19 REMARK 500 1 SER A 198 24.32 -78.16 REMARK 500 1 ASN A 204 173.62 56.49 REMARK 500 1 LYS A 205 104.72 -164.37 REMARK 500 1 MET A 214 170.51 74.21 REMARK 500 1 LEU A 215 -75.71 -141.47 REMARK 500 1 THR A 237 23.83 -153.44 REMARK 500 1 HIS A 243 16.34 -145.82 REMARK 500 2 SER A 176 -170.56 58.10 REMARK 500 2 GLN A 179 -77.95 59.99 REMARK 500 2 LEU A 181 107.68 -59.15 REMARK 500 2 THR A 184 11.11 -142.64 REMARK 500 2 VAL A 185 -5.63 52.12 REMARK 500 2 CYS A 188 23.63 -143.23 REMARK 500 2 TYR A 194 -3.51 -144.04 REMARK 500 2 ASN A 204 42.99 -149.39 REMARK 500 2 LYS A 205 81.10 -169.34 REMARK 500 2 LYS A 207 16.39 -148.35 REMARK 500 2 SER A 211 59.52 -118.24 REMARK 500 2 MET A 214 77.38 44.58 REMARK 500 2 GLU A 216 35.20 -75.00 REMARK 500 2 ALA A 222 149.51 58.78 REMARK 500 2 HIS A 243 29.19 -157.71 REMARK 500 3 SER A 176 11.28 -142.01 REMARK 500 3 LEU A 177 -177.38 54.16 REMARK 500 3 ARG A 180 -83.45 -142.48 REMARK 500 3 GLN A 182 -0.14 -155.01 REMARK 500 3 TYR A 194 -5.45 -141.12 REMARK 500 3 LYS A 196 23.50 49.35 REMARK 500 3 GLN A 197 4.45 -154.94 REMARK 500 3 LYS A 199 76.04 44.16 REMARK 500 3 LEU A 201 35.58 -77.95 REMARK 500 3 LYS A 205 -47.71 -144.46 REMARK 500 3 GLU A 212 45.48 -77.92 REMARK 500 3 LYS A 234 -84.86 66.97 REMARK 500 3 HIS A 236 -164.60 46.69 REMARK 500 3 SER A 241 82.72 -150.19 REMARK 500 3 HIS A 243 33.30 -74.59 REMARK 500 4 SER A 176 98.87 -163.65 REMARK 500 4 GLN A 179 -42.15 -145.30 REMARK 500 4 THR A 184 -1.63 -153.47 REMARK 500 4 VAL A 185 79.69 55.86 REMARK 500 4 LEU A 187 18.85 -142.94 REMARK 500 4 CYS A 188 88.54 -150.59 REMARK 500 4 MET A 191 13.58 -58.67 REMARK 500 4 ARG A 192 -45.37 -132.36 REMARK 500 REMARK 500 THIS ENTRY HAS 322 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 242 HIS A 243 15 -147.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 PHE A 202 0.08 SIDE CHAIN REMARK 500 2 ARG A 180 0.09 SIDE CHAIN REMARK 500 3 ARG A 192 0.08 SIDE CHAIN REMARK 500 5 TYR A 194 0.07 SIDE CHAIN REMARK 500 11 ARG A 175 0.10 SIDE CHAIN REMARK 500 13 ARG A 192 0.08 SIDE CHAIN REMARK 500 16 ARG A 206 0.10 SIDE CHAIN REMARK 500 20 ARG A 192 0.08 SIDE CHAIN REMARK 500 20 TYR A 194 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19966 RELATED DB: BMRB DBREF 2MP6 A 175 244 UNP O54928 SOCS5_MOUSE 175 244 SEQRES 1 A 70 ARG SER LEU ARG GLN ARG LEU GLN ASP THR VAL GLY LEU SEQRES 2 A 70 CYS PHE PRO MET ARG THR TYR SER LYS GLN SER LYS PRO SEQRES 3 A 70 LEU PHE SER ASN LYS ARG LYS ILE HIS LEU SER GLU LEU SEQRES 4 A 70 MET LEU GLU LYS CYS PRO PHE PRO ALA GLY SER ASP LEU SEQRES 5 A 70 ALA GLN LYS TRP HIS LEU ILE LYS GLN HIS THR ALA PRO SEQRES 6 A 70 VAL SER PRO HIS SER HELIX 1 1 SER A 224 LYS A 234 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1