data_2MPC # _entry.id 2MPC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.360 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MPC pdb_00002mpc 10.2210/pdb2mpc/pdb RCSB RCSB103889 ? ? BMRB 19875 ? ? WWPDB D_1000103889 ? ? # _pdbx_database_related.db_id 19875 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MPC _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-05-15 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Soh, S.L.' 1 'Smith, S.J.' 2 'Hill, J.M.' 3 # _citation.id primary _citation.title 'Identification of multifaceted binding modes for pyrin and ASC pyrin domains gives insights into pyrin inflammasome assembly.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 289 _citation.page_first 23504 _citation.page_last 23519 _citation.year 2014 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 1083-351X _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25006247 _citation.pdbx_database_id_DOI 10.1074/jbc.M114.553305 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vajjhala, P.R.' 1 ? primary 'Kaiser, S.' 2 ? primary 'Smith, S.J.' 3 ? primary 'Ong, Q.R.' 4 ? primary 'Soh, S.L.' 5 ? primary 'Stacey, K.J.' 6 ? primary 'Hill, J.M.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Pyrin _entity.formula_weight 11826.583 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'DAPIN domain (PYD), residues 1-92' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Marenostrin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAKTPSDHLLSTLEELVPYDFEKFKFKLQNTSVQKEHSRIPRSQIQRARPVKMATLLVTYYGEEYAVQLTLQVLRAINQR LLAEELHRAAIQLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAKTPSDHLLSTLEELVPYDFEKFKFKLQNTSVQKEHSRIPRSQIQRARPVKMATLLVTYYGEEYAVQLTLQVLRAINQR LLAEELHRAAIQLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LYS n 1 4 THR n 1 5 PRO n 1 6 SER n 1 7 ASP n 1 8 HIS n 1 9 LEU n 1 10 LEU n 1 11 SER n 1 12 THR n 1 13 LEU n 1 14 GLU n 1 15 GLU n 1 16 LEU n 1 17 VAL n 1 18 PRO n 1 19 TYR n 1 20 ASP n 1 21 PHE n 1 22 GLU n 1 23 LYS n 1 24 PHE n 1 25 LYS n 1 26 PHE n 1 27 LYS n 1 28 LEU n 1 29 GLN n 1 30 ASN n 1 31 THR n 1 32 SER n 1 33 VAL n 1 34 GLN n 1 35 LYS n 1 36 GLU n 1 37 HIS n 1 38 SER n 1 39 ARG n 1 40 ILE n 1 41 PRO n 1 42 ARG n 1 43 SER n 1 44 GLN n 1 45 ILE n 1 46 GLN n 1 47 ARG n 1 48 ALA n 1 49 ARG n 1 50 PRO n 1 51 VAL n 1 52 LYS n 1 53 MET n 1 54 ALA n 1 55 THR n 1 56 LEU n 1 57 LEU n 1 58 VAL n 1 59 THR n 1 60 TYR n 1 61 TYR n 1 62 GLY n 1 63 GLU n 1 64 GLU n 1 65 TYR n 1 66 ALA n 1 67 VAL n 1 68 GLN n 1 69 LEU n 1 70 THR n 1 71 LEU n 1 72 GLN n 1 73 VAL n 1 74 LEU n 1 75 ARG n 1 76 ALA n 1 77 ILE n 1 78 ASN n 1 79 GLN n 1 80 ARG n 1 81 LEU n 1 82 LEU n 1 83 ALA n 1 84 GLU n 1 85 GLU n 1 86 LEU n 1 87 HIS n 1 88 ARG n 1 89 ALA n 1 90 ALA n 1 91 ILE n 1 92 GLN n 1 93 LEU n 1 94 GLU n 1 95 HIS n 1 96 HIS n 1 97 HIS n 1 98 HIS n 1 99 HIS n 1 100 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MEFV, MEF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET-28b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MEFV_HUMAN _struct_ref.pdbx_db_accession O15553 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAKTPSDHLLSTLEELVPYDFEKFKFKLQNTSVQKEHSRIPRSQIQRARPVKMATLLVTYYGEEYAVQLTLQVLRAINQR LLAEELHRAAIQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MPC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O15553 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 92 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 92 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MPC LEU A 93 ? UNP O15553 ? ? 'expression tag' 93 1 1 2MPC GLU A 94 ? UNP O15553 ? ? 'expression tag' 94 2 1 2MPC HIS A 95 ? UNP O15553 ? ? 'expression tag' 95 3 1 2MPC HIS A 96 ? UNP O15553 ? ? 'expression tag' 96 4 1 2MPC HIS A 97 ? UNP O15553 ? ? 'expression tag' 97 5 1 2MPC HIS A 98 ? UNP O15553 ? ? 'expression tag' 98 6 1 2MPC HIS A 99 ? UNP O15553 ? ? 'expression tag' 99 7 1 2MPC HIS A 100 ? UNP O15553 ? ? 'expression tag' 100 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCO' 1 3 1 '3D HN(CA)CO' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HNCACB' 1 6 1 '3D C(CO)NH' 1 7 1 '3D HBHA(CO)NH' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.pH 4.0 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.8 mM [U-100% 13C; U-100% 15N] Pyrin-1, 90 % H2O-2, 10 % D2O-3, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 750 Bruker AVANCE 1 'Bruker Avance' 900 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MPC _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 5000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MPC _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MPC _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Bruker Biospin' collection TopSpin 1 ? 'Bruker Biospin' processing TopSpin 2 ? 'Bruker Biospin' 'data analysis' TopSpin 3 ? 'YANG SHEN, OLIVER LANGE, FRANK DELAGLIO, ET AL.' refinement CS-ROSETTA 4 3.4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MPC _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MPC _struct.title 'Solution structure of the pyrin domain of human Pyrin' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MPC _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'pyrin domain, death domain, inflammation, CS-Rosetta, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 4 ? LEU A 16 ? THR A 4 LEU A 16 1 ? 13 HELX_P HELX_P2 2 VAL A 17 ? GLN A 29 ? VAL A 17 GLN A 29 1 ? 13 HELX_P HELX_P3 3 PRO A 41 ? ALA A 48 ? PRO A 41 ALA A 48 1 ? 8 HELX_P HELX_P4 4 LYS A 52 ? TYR A 61 ? LYS A 52 TYR A 61 1 ? 10 HELX_P HELX_P5 5 GLY A 62 ? ILE A 77 ? GLY A 62 ILE A 77 1 ? 16 HELX_P HELX_P6 6 GLN A 79 ? LEU A 93 ? GLN A 79 LEU A 93 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2MPC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLU 94 94 ? ? ? A . n A 1 95 HIS 95 95 ? ? ? A . n A 1 96 HIS 96 96 ? ? ? A . n A 1 97 HIS 97 97 ? ? ? A . n A 1 98 HIS 98 98 ? ? ? A . n A 1 99 HIS 99 99 ? ? ? A . n A 1 100 HIS 100 100 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-16 2 'Structure model' 1 1 2022-08-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_nmr_software 5 2 'Structure model' pdbx_nmr_spectrometer 6 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.name' 14 2 'Structure model' '_database_2.pdbx_DOI' 15 2 'Structure model' '_database_2.pdbx_database_accession' 16 2 'Structure model' '_pdbx_nmr_software.name' 17 2 'Structure model' '_pdbx_nmr_spectrometer.model' 18 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Pyrin-1 0.8 ? mM '[U-100% 13C; U-100% 15N]' 1 H2O-2 90 ? % ? 1 D2O-3 10 ? % ? 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 79 ? ? -107.44 70.60 2 2 ASN A 78 ? ? 60.24 60.73 3 3 GLN A 79 ? ? -110.91 71.85 4 5 ASN A 78 ? ? 72.60 47.98 5 8 GLN A 79 ? ? -114.40 77.16 6 9 GLN A 79 ? ? -110.02 78.24 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A GLU 94 ? A GLU 94 5 1 Y 1 A HIS 95 ? A HIS 95 6 1 Y 1 A HIS 96 ? A HIS 96 7 1 Y 1 A HIS 97 ? A HIS 97 8 1 Y 1 A HIS 98 ? A HIS 98 9 1 Y 1 A HIS 99 ? A HIS 99 10 1 Y 1 A HIS 100 ? A HIS 100 11 2 Y 1 A MET 1 ? A MET 1 12 2 Y 1 A ALA 2 ? A ALA 2 13 2 Y 1 A LYS 3 ? A LYS 3 14 2 Y 1 A GLU 94 ? A GLU 94 15 2 Y 1 A HIS 95 ? A HIS 95 16 2 Y 1 A HIS 96 ? A HIS 96 17 2 Y 1 A HIS 97 ? A HIS 97 18 2 Y 1 A HIS 98 ? A HIS 98 19 2 Y 1 A HIS 99 ? A HIS 99 20 2 Y 1 A HIS 100 ? A HIS 100 21 3 Y 1 A MET 1 ? A MET 1 22 3 Y 1 A ALA 2 ? A ALA 2 23 3 Y 1 A LYS 3 ? A LYS 3 24 3 Y 1 A GLU 94 ? A GLU 94 25 3 Y 1 A HIS 95 ? A HIS 95 26 3 Y 1 A HIS 96 ? A HIS 96 27 3 Y 1 A HIS 97 ? A HIS 97 28 3 Y 1 A HIS 98 ? A HIS 98 29 3 Y 1 A HIS 99 ? A HIS 99 30 3 Y 1 A HIS 100 ? A HIS 100 31 4 Y 1 A MET 1 ? A MET 1 32 4 Y 1 A ALA 2 ? A ALA 2 33 4 Y 1 A LYS 3 ? A LYS 3 34 4 Y 1 A GLU 94 ? A GLU 94 35 4 Y 1 A HIS 95 ? A HIS 95 36 4 Y 1 A HIS 96 ? A HIS 96 37 4 Y 1 A HIS 97 ? A HIS 97 38 4 Y 1 A HIS 98 ? A HIS 98 39 4 Y 1 A HIS 99 ? A HIS 99 40 4 Y 1 A HIS 100 ? A HIS 100 41 5 Y 1 A MET 1 ? A MET 1 42 5 Y 1 A ALA 2 ? A ALA 2 43 5 Y 1 A LYS 3 ? A LYS 3 44 5 Y 1 A GLU 94 ? A GLU 94 45 5 Y 1 A HIS 95 ? A HIS 95 46 5 Y 1 A HIS 96 ? A HIS 96 47 5 Y 1 A HIS 97 ? A HIS 97 48 5 Y 1 A HIS 98 ? A HIS 98 49 5 Y 1 A HIS 99 ? A HIS 99 50 5 Y 1 A HIS 100 ? A HIS 100 51 6 Y 1 A MET 1 ? A MET 1 52 6 Y 1 A ALA 2 ? A ALA 2 53 6 Y 1 A LYS 3 ? A LYS 3 54 6 Y 1 A GLU 94 ? A GLU 94 55 6 Y 1 A HIS 95 ? A HIS 95 56 6 Y 1 A HIS 96 ? A HIS 96 57 6 Y 1 A HIS 97 ? A HIS 97 58 6 Y 1 A HIS 98 ? A HIS 98 59 6 Y 1 A HIS 99 ? A HIS 99 60 6 Y 1 A HIS 100 ? A HIS 100 61 7 Y 1 A MET 1 ? A MET 1 62 7 Y 1 A ALA 2 ? A ALA 2 63 7 Y 1 A LYS 3 ? A LYS 3 64 7 Y 1 A GLU 94 ? A GLU 94 65 7 Y 1 A HIS 95 ? A HIS 95 66 7 Y 1 A HIS 96 ? A HIS 96 67 7 Y 1 A HIS 97 ? A HIS 97 68 7 Y 1 A HIS 98 ? A HIS 98 69 7 Y 1 A HIS 99 ? A HIS 99 70 7 Y 1 A HIS 100 ? A HIS 100 71 8 Y 1 A MET 1 ? A MET 1 72 8 Y 1 A ALA 2 ? A ALA 2 73 8 Y 1 A LYS 3 ? A LYS 3 74 8 Y 1 A GLU 94 ? A GLU 94 75 8 Y 1 A HIS 95 ? A HIS 95 76 8 Y 1 A HIS 96 ? A HIS 96 77 8 Y 1 A HIS 97 ? A HIS 97 78 8 Y 1 A HIS 98 ? A HIS 98 79 8 Y 1 A HIS 99 ? A HIS 99 80 8 Y 1 A HIS 100 ? A HIS 100 81 9 Y 1 A MET 1 ? A MET 1 82 9 Y 1 A ALA 2 ? A ALA 2 83 9 Y 1 A LYS 3 ? A LYS 3 84 9 Y 1 A GLU 94 ? A GLU 94 85 9 Y 1 A HIS 95 ? A HIS 95 86 9 Y 1 A HIS 96 ? A HIS 96 87 9 Y 1 A HIS 97 ? A HIS 97 88 9 Y 1 A HIS 98 ? A HIS 98 89 9 Y 1 A HIS 99 ? A HIS 99 90 9 Y 1 A HIS 100 ? A HIS 100 91 10 Y 1 A MET 1 ? A MET 1 92 10 Y 1 A ALA 2 ? A ALA 2 93 10 Y 1 A LYS 3 ? A LYS 3 94 10 Y 1 A GLU 94 ? A GLU 94 95 10 Y 1 A HIS 95 ? A HIS 95 96 10 Y 1 A HIS 96 ? A HIS 96 97 10 Y 1 A HIS 97 ? A HIS 97 98 10 Y 1 A HIS 98 ? A HIS 98 99 10 Y 1 A HIS 99 ? A HIS 99 100 10 Y 1 A HIS 100 ? A HIS 100 #