HEADER ANTIMICROBIAL PROTEIN 12-JUN-14 2MQ4 TITLE CYSTEINE DELETED PROTEGRIN-1 (CDP-1): ANTI-BACTERIAL ACTIVITY, OUTER- TITLE 2 MEMBRANE DISRUPTION AND SELECTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: RR11 PEPTIDE FROM CYSTEINE DELETED PROTEGRIN-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS BETA HAIRPIN, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.MOHANRAM,S.BHATTACHARJYA REVDAT 3 14-JUN-23 2MQ4 1 REMARK REVDAT 2 24-AUG-22 2MQ4 1 JRNL REMARK REVDAT 1 30-JUL-14 2MQ4 0 JRNL AUTH H.MOHANRAM,S.BHATTACHARJYA JRNL TITL CYSTEINE DELETED PROTEGRIN-1 (CDP-1): ANTI-BACTERIAL JRNL TITL 2 ACTIVITY, OUTER-MEMBRANE DISRUPTION AND SELECTIVITY. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1840 3006 2014 JRNL REFN ISSN 0006-3002 JRNL PMID 24997421 JRNL DOI 10.1016/J.BBAGEN.2014.06.018 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, CYANA REMARK 3 AUTHORS : GODDARD (SPARKY), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000103916. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 55.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 55.1M PROTEIN-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 2 52.27 -105.94 REMARK 500 1 ARG A 4 38.34 -73.91 REMARK 500 1 PHE A 7 -79.04 -135.42 REMARK 500 1 VAL A 9 -4.43 -43.82 REMARK 500 2 LEU A 2 50.63 -107.00 REMARK 500 2 ARG A 4 37.80 -73.66 REMARK 500 2 PHE A 7 -78.89 -135.55 REMARK 500 2 VAL A 9 -4.35 -43.93 REMARK 500 3 LEU A 2 52.38 -105.88 REMARK 500 3 ARG A 4 38.32 -73.90 REMARK 500 3 PHE A 7 -79.08 -135.44 REMARK 500 3 VAL A 9 -4.42 -43.84 REMARK 500 4 LEU A 2 50.60 -106.98 REMARK 500 4 ARG A 4 37.78 -73.69 REMARK 500 4 PHE A 7 -78.91 -135.54 REMARK 500 4 VAL A 9 -4.36 -43.93 REMARK 500 5 LEU A 2 52.21 -106.11 REMARK 500 5 ARG A 4 38.38 -73.95 REMARK 500 5 PHE A 7 -78.98 -135.44 REMARK 500 5 VAL A 9 -4.38 -43.89 REMARK 500 6 LEU A 2 50.61 -106.97 REMARK 500 6 ARG A 4 37.74 -73.75 REMARK 500 6 PHE A 7 -78.93 -135.55 REMARK 500 6 VAL A 9 -4.31 -43.99 REMARK 500 7 LEU A 2 50.66 -106.98 REMARK 500 7 ARG A 4 37.84 -73.75 REMARK 500 7 PHE A 7 -78.86 -135.54 REMARK 500 7 VAL A 9 -4.37 -43.94 REMARK 500 8 LEU A 2 50.45 -107.13 REMARK 500 8 ARG A 4 38.37 -73.94 REMARK 500 8 PHE A 7 -78.69 -135.78 REMARK 500 8 VAL A 9 -4.33 -43.90 REMARK 500 9 LEU A 2 50.81 -106.89 REMARK 500 9 ARG A 4 37.79 -73.78 REMARK 500 9 PHE A 7 -78.81 -135.46 REMARK 500 9 VAL A 9 -4.58 -43.80 REMARK 500 10 LEU A 2 51.13 -107.24 REMARK 500 10 ARG A 4 43.20 -75.31 REMARK 500 10 PHE A 7 -80.83 -134.23 REMARK 500 10 VAL A 9 -5.62 -43.50 REMARK 500 11 LEU A 2 50.96 -107.34 REMARK 500 11 ARG A 4 43.13 -75.21 REMARK 500 11 PHE A 7 -80.70 -134.22 REMARK 500 11 VAL A 9 -5.56 -43.54 REMARK 500 12 LEU A 2 50.90 -107.34 REMARK 500 12 ARG A 4 43.11 -75.25 REMARK 500 12 PHE A 7 -80.70 -134.33 REMARK 500 12 VAL A 9 -5.53 -43.57 REMARK 500 13 LEU A 2 50.93 -107.33 REMARK 500 13 ARG A 4 43.18 -75.32 REMARK 500 REMARK 500 THIS ENTRY HAS 80 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25011 RELATED DB: BMRB REMARK 900 RELATED ID: 2MQ2 RELATED DB: PDB REMARK 900 RELATED ID: 2MQ5 RELATED DB: PDB DBREF 2MQ4 A 1 11 PDB 2MQ4 2MQ4 1 11 SEQRES 1 A 11 ARG LEU TYR ARG ARG ARG PHE VAL VAL GLY ARG CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1