data_2MRP # _entry.id 2MRP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MRP RCSB RCSB103972 BMRB 25088 WWPDB D_1000103972 # _pdbx_database_related.db_id 25088 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MRP _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-07-14 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nowicka, U.' 1 'Fushman, D.' 2 'Chen, T.' 3 # _citation.id primary _citation.title 'DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.' _citation.journal_abbrev Structure _citation.journal_volume 23 _citation.page_first 542 _citation.page_last 557 _citation.year 2015 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25703377 _citation.pdbx_database_id_DOI 10.1016/j.str.2015.01.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nowicka, U.' 1 primary 'Zhang, D.' 2 primary 'Walker, O.' 3 primary 'Krutauz, D.' 4 primary 'Castaneda, C.A.' 5 primary 'Chaturvedi, A.' 6 primary 'Chen, T.Y.' 7 primary 'Reis, N.' 8 primary 'Glickman, M.H.' 9 primary 'Fushman, D.' 10 # _cell.entry_id 2MRP _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2MRP _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DNA damage-inducible protein 1' _entity.formula_weight 10589.902 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Ubiquitin like domain of DNA-damage-inducible 1 protein (Ddi1UBL)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'v-SNARE-master 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGSDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSLKELGLKTDD LLLIRGKISNSKLN ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGSDLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSLKELGLKTDD LLLIRGKISNSKLN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 SER n 1 13 ASP n 1 14 LEU n 1 15 THR n 1 16 ILE n 1 17 SER n 1 18 ASN n 1 19 GLU n 1 20 LEU n 1 21 THR n 1 22 GLY n 1 23 GLU n 1 24 ILE n 1 25 TYR n 1 26 GLY n 1 27 PRO n 1 28 ILE n 1 29 GLU n 1 30 VAL n 1 31 SER n 1 32 GLU n 1 33 ASP n 1 34 MET n 1 35 ALA n 1 36 LEU n 1 37 THR n 1 38 ASP n 1 39 LEU n 1 40 ILE n 1 41 ALA n 1 42 LEU n 1 43 LEU n 1 44 GLN n 1 45 ALA n 1 46 ASP n 1 47 CYS n 1 48 GLY n 1 49 PHE n 1 50 ASP n 1 51 LYS n 1 52 THR n 1 53 LYS n 1 54 HIS n 1 55 ASP n 1 56 LEU n 1 57 TYR n 1 58 TYR n 1 59 ASN n 1 60 MET n 1 61 ASP n 1 62 ILE n 1 63 LEU n 1 64 ASP n 1 65 SER n 1 66 ASN n 1 67 ARG n 1 68 THR n 1 69 GLN n 1 70 SER n 1 71 LEU n 1 72 LYS n 1 73 GLU n 1 74 LEU n 1 75 GLY n 1 76 LEU n 1 77 LYS n 1 78 THR n 1 79 ASP n 1 80 ASP n 1 81 LEU n 1 82 LEU n 1 83 LEU n 1 84 ILE n 1 85 ARG n 1 86 GLY n 1 87 LYS n 1 88 ILE n 1 89 SER n 1 90 ASN n 1 91 SER n 1 92 LYS n 1 93 LEU n 1 94 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DDI1, VSM1, YER143W' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain M15 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pQE30 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DDI1_YEAST _struct_ref.pdbx_db_accession P40087 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DLTISNELTGEIYGPIEVSEDMALTDLIALLQADCGFDKTKHDLYYNMDILDSNRTQSLKELGLKTDDLLLIRGKISNS _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MRP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P40087 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 80 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 80 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MRP MET A 1 ? UNP P40087 ? ? 'EXPRESSION TAG' -10 1 1 2MRP ARG A 2 ? UNP P40087 ? ? 'EXPRESSION TAG' -9 2 1 2MRP GLY A 3 ? UNP P40087 ? ? 'EXPRESSION TAG' -8 3 1 2MRP SER A 4 ? UNP P40087 ? ? 'EXPRESSION TAG' -7 4 1 2MRP HIS A 5 ? UNP P40087 ? ? 'EXPRESSION TAG' -6 5 1 2MRP HIS A 6 ? UNP P40087 ? ? 'EXPRESSION TAG' -5 6 1 2MRP HIS A 7 ? UNP P40087 ? ? 'EXPRESSION TAG' -4 7 1 2MRP HIS A 8 ? UNP P40087 ? ? 'EXPRESSION TAG' -3 8 1 2MRP HIS A 9 ? UNP P40087 ? ? 'EXPRESSION TAG' -2 9 1 2MRP HIS A 10 ? UNP P40087 ? ? 'EXPRESSION TAG' -1 10 1 2MRP GLY A 11 ? UNP P40087 ? ? 'EXPRESSION TAG' 0 11 1 2MRP SER A 12 ? UNP P40087 ? ? 'EXPRESSION TAG' 1 12 1 2MRP LYS A 92 ? UNP P40087 ? ? 'EXPRESSION TAG' 81 13 1 2MRP LEU A 93 ? UNP P40087 ? ? 'EXPRESSION TAG' 82 14 1 2MRP ASN A 94 ? UNP P40087 ? ? 'EXPRESSION TAG' 83 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-1H NOESY' 1 4 1 '3D H(CCO)NH' 1 5 1 '3D 1H-13C NOESY' 1 6 2 '3D HNCO' 1 7 2 '3D HN(CA)CO' 1 8 2 '3D HN(CO)CA' 1 9 2 '3D HNCA' 1 10 2 '3D CBCA(CO)NH' 1 11 2 '3D HNCACB' 1 12 2 '3D C(CO)NH' 1 13 3 RDC 2 14 3 RDC # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 10 6.8 ambient atm 295.5 K 2 10 6.8 ambient atm 315 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 15N] Ddi1UBL, 5 % [U-99% 2H] D2O, 95 % H2O, 20 mM sodium phosphate, 3 mM TCEP, 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '1 mM [U-100% 13C; U-100% 15N] Ddi1UBL, 5 % [U-99% 2H] D2O, 95 % H2O, 20 mM sodium phosphate, 3 mM TCEP, 95% H2O/5% D2O' 2 '95% H2O/5% D2O' ;1 mM [U-100% 15N] Ddi1UBL, 5 % [U-99% 2H] D2O, 45 % H2O, 10 mM sodium phosphate, 3 mM TCEP, 5 % C12E5, 45 % n-hexanol, 95% H2O/5% D2O ; 3 '95% H2O/5% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MRP _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MRP _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MRP _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Keller and Wuthrich' 'peak picking' CARA 1.8.1 1 'Keller and Wuthrich' 'chemical shift assignment' CARA 1.8.1 2 'Bruker Biospin' collection TOPSPIN 2.1 3 'Bruker Biospin' processing TOPSPIN 2.1 4 'Bruker Biospin' 'data analysis' TOPSPIN 2.1 5 ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 2.1 6 ;Linge, O'Donoghue and Nilges ; refinement ARIA 2.1 7 'Cornilescu, Delaglio and Bax' 'backbone torsion angles prediction' TALOS TALOS+ 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MRP _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MRP _struct.title 'NMR solution structure of the Ubiquitin like domain (UBL) of DNA-damage-inducible 1 protein (Ddi1)' _struct.pdbx_descriptor 'DNA damage-inducible protein 1' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MRP _struct_keywords.pdbx_keywords 'UBIQUITIN-BINDING PROTEIN' _struct_keywords.text 'DNA-damage-inducible 1 protein, Ddi1, Ubiquitin like domain, UBL, Ubiquitin binding, UBIQUITIN-BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 36 ? ALA A 45 ? LEU A 25 ALA A 34 1 ? 10 HELX_P HELX_P2 2 LYS A 51 ? LYS A 53 ? LYS A 40 LYS A 42 5 ? 3 HELX_P HELX_P3 3 LEU A 71 ? LEU A 74 ? LEU A 60 LEU A 63 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 23 ? PRO A 27 ? GLU A 12 PRO A 16 A 2 LEU A 14 ? ASN A 18 ? LEU A 3 ASN A 7 A 3 LEU A 81 ? ARG A 85 ? LEU A 70 ARG A 74 A 4 ASP A 55 ? TYR A 58 ? ASP A 44 TYR A 47 A 5 ASP A 61 ? ILE A 62 ? ASP A 50 ILE A 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 2 3 N SER A 17 ? N SER A 6 O ILE A 84 ? O ILE A 73 A 3 4 O ARG A 85 ? O ARG A 74 N ASP A 55 ? N ASP A 44 A 4 5 N TYR A 58 ? N TYR A 47 O ASP A 61 ? O ASP A 50 # _atom_sites.entry_id 2MRP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O Q S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -10 ? ? ? A . n A 1 2 ARG 2 -9 ? ? ? A . n A 1 3 GLY 3 -8 ? ? ? A . n A 1 4 SER 4 -7 ? ? ? A . n A 1 5 HIS 5 -6 ? ? ? A . n A 1 6 HIS 6 -5 ? ? ? A . n A 1 7 HIS 7 -4 ? ? ? A . n A 1 8 HIS 8 -3 ? ? ? A . n A 1 9 HIS 9 -2 ? ? ? A . n A 1 10 HIS 10 -1 ? ? ? A . n A 1 11 GLY 11 0 ? ? ? A . n A 1 12 SER 12 1 ? ? ? A . n A 1 13 ASP 13 2 2 ASP ASP A . n A 1 14 LEU 14 3 3 LEU LEU A . n A 1 15 THR 15 4 4 THR THR A . n A 1 16 ILE 16 5 5 ILE ILE A . n A 1 17 SER 17 6 6 SER SER A . n A 1 18 ASN 18 7 7 ASN ASN A . n A 1 19 GLU 19 8 8 GLU GLU A . n A 1 20 LEU 20 9 9 LEU LEU A . n A 1 21 THR 21 10 10 THR THR A . n A 1 22 GLY 22 11 11 GLY GLY A . n A 1 23 GLU 23 12 12 GLU GLU A . n A 1 24 ILE 24 13 13 ILE ILE A . n A 1 25 TYR 25 14 14 TYR TYR A . n A 1 26 GLY 26 15 15 GLY GLY A . n A 1 27 PRO 27 16 16 PRO PRO A . n A 1 28 ILE 28 17 17 ILE ILE A . n A 1 29 GLU 29 18 18 GLU GLU A . n A 1 30 VAL 30 19 19 VAL VAL A . n A 1 31 SER 31 20 20 SER SER A . n A 1 32 GLU 32 21 21 GLU GLU A . n A 1 33 ASP 33 22 22 ASP ASP A . n A 1 34 MET 34 23 23 MET MET A . n A 1 35 ALA 35 24 24 ALA ALA A . n A 1 36 LEU 36 25 25 LEU LEU A . n A 1 37 THR 37 26 26 THR THR A . n A 1 38 ASP 38 27 27 ASP ASP A . n A 1 39 LEU 39 28 28 LEU LEU A . n A 1 40 ILE 40 29 29 ILE ILE A . n A 1 41 ALA 41 30 30 ALA ALA A . n A 1 42 LEU 42 31 31 LEU LEU A . n A 1 43 LEU 43 32 32 LEU LEU A . n A 1 44 GLN 44 33 33 GLN GLN A . n A 1 45 ALA 45 34 34 ALA ALA A . n A 1 46 ASP 46 35 35 ASP ASP A . n A 1 47 CYS 47 36 36 CYS CYS A . n A 1 48 GLY 48 37 37 GLY GLY A . n A 1 49 PHE 49 38 38 PHE PHE A . n A 1 50 ASP 50 39 39 ASP ASP A . n A 1 51 LYS 51 40 40 LYS LYS A . n A 1 52 THR 52 41 41 THR THR A . n A 1 53 LYS 53 42 42 LYS LYS A . n A 1 54 HIS 54 43 43 HIS HIS A . n A 1 55 ASP 55 44 44 ASP ASP A . n A 1 56 LEU 56 45 45 LEU LEU A . n A 1 57 TYR 57 46 46 TYR TYR A . n A 1 58 TYR 58 47 47 TYR TYR A . n A 1 59 ASN 59 48 48 ASN ASN A . n A 1 60 MET 60 49 49 MET MET A . n A 1 61 ASP 61 50 50 ASP ASP A . n A 1 62 ILE 62 51 51 ILE ILE A . n A 1 63 LEU 63 52 52 LEU LEU A . n A 1 64 ASP 64 53 53 ASP ASP A . n A 1 65 SER 65 54 54 SER SER A . n A 1 66 ASN 66 55 55 ASN ASN A . n A 1 67 ARG 67 56 56 ARG ARG A . n A 1 68 THR 68 57 57 THR THR A . n A 1 69 GLN 69 58 58 GLN GLN A . n A 1 70 SER 70 59 59 SER SER A . n A 1 71 LEU 71 60 60 LEU LEU A . n A 1 72 LYS 72 61 61 LYS LYS A . n A 1 73 GLU 73 62 62 GLU GLU A . n A 1 74 LEU 74 63 63 LEU LEU A . n A 1 75 GLY 75 64 64 GLY GLY A . n A 1 76 LEU 76 65 65 LEU LEU A . n A 1 77 LYS 77 66 66 LYS LYS A . n A 1 78 THR 78 67 67 THR THR A . n A 1 79 ASP 79 68 68 ASP ASP A . n A 1 80 ASP 80 69 69 ASP ASP A . n A 1 81 LEU 81 70 70 LEU LEU A . n A 1 82 LEU 82 71 71 LEU LEU A . n A 1 83 LEU 83 72 72 LEU LEU A . n A 1 84 ILE 84 73 73 ILE ILE A . n A 1 85 ARG 85 74 74 ARG ARG A . n A 1 86 GLY 86 75 75 GLY GLY A . n A 1 87 LYS 87 76 76 LYS LYS A . n A 1 88 ILE 88 77 77 ILE ILE A . n A 1 89 SER 89 78 78 SER SER A . n A 1 90 ASN 90 79 79 ASN ASN A . n A 1 91 SER 91 80 80 SER SER A . n A 1 92 LYS 92 81 ? ? ? A . n A 1 93 LEU 93 82 ? ? ? A . n A 1 94 ASN 94 83 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-11 2 'Structure model' 1 1 2015-03-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX DETERMINATION METHOD: AUTHOR ; 700 ;SHEET DETERMINATION METHOD: AUTHOR ; # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Ddi1UBL-1 1 ? mM '[U-100% 15N]' 1 D2O-2 5 ? % '[U-99% 2H]' 1 H2O-3 95 ? % ? 1 'sodium phosphate-4' 20 ? mM ? 1 TCEP-5 3 ? mM ? 1 Ddi1UBL-6 1 ? mM '[U-100% 13C; U-100% 15N]' 2 D2O-7 5 ? % '[U-99% 2H]' 2 H2O-8 95 ? % ? 2 'sodium phosphate-9' 20 ? mM ? 2 TCEP-10 3 ? mM ? 2 Ddi1UBL-11 1 ? mM '[U-100% 15N]' 3 D2O-12 5 ? % '[U-99% 2H]' 3 H2O-13 45 ? % ? 3 'sodium phosphate-14' 10 ? mM ? 3 TCEP-15 3 ? mM ? 3 C12E5-16 5 ? % ? 3 n-hexanol-17 45 ? % ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.09 2 1 HB3 A MET 23 ? ? HD12 A LEU 60 ? ? 1.23 3 1 HA A LEU 60 ? ? HD11 A LEU 65 ? ? 1.27 4 1 O A SER 59 ? ? H A LEU 63 ? ? 1.58 5 1 OD2 A ASP 39 ? ? HG1 A THR 41 ? ? 1.59 6 2 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.19 7 2 H A ASP 2 ? ? HA A THR 67 ? ? 1.19 8 2 HD11 A LEU 9 ? ? HA3 A GLY 75 ? ? 1.26 9 2 O A ASP 44 ? ? H A ARG 74 ? ? 1.56 10 2 HH A TYR 47 ? ? OD2 A ASP 69 ? ? 1.58 11 2 O A SER 59 ? ? H A LEU 63 ? ? 1.58 12 3 HD11 A LEU 45 ? ? HB3 A LEU 71 ? ? 1.17 13 3 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.20 14 3 HB A THR 10 ? ? HG3 A GLU 12 ? ? 1.23 15 3 HA A LEU 60 ? ? HD11 A LEU 65 ? ? 1.23 16 3 HG2 A LYS 66 ? ? H A ASP 68 ? ? 1.26 17 3 HG A SER 20 ? ? OD2 A ASP 22 ? ? 1.58 18 4 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.14 19 4 HB3 A MET 23 ? ? HD11 A LEU 60 ? ? 1.32 20 4 O A SER 59 ? ? H A LEU 63 ? ? 1.60 21 5 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.16 22 5 H A ASP 2 ? ? HA A THR 67 ? ? 1.21 23 5 HG2 A LYS 66 ? ? H A ASP 68 ? ? 1.30 24 5 OD1 A ASP 39 ? ? HG1 A THR 41 ? ? 1.54 25 6 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.13 26 6 HD13 A LEU 45 ? ? HB2 A LEU 71 ? ? 1.21 27 6 HD12 A LEU 60 ? ? HD13 A LEU 65 ? ? 1.27 28 6 HB3 A ASP 44 ? ? HG13 A ILE 51 ? ? 1.28 29 6 HD13 A LEU 63 ? ? HD12 A LEU 65 ? ? 1.32 30 6 HB3 A LYS 76 ? ? H A ILE 77 ? ? 1.32 31 6 OD1 A ASP 39 ? ? HG1 A THR 41 ? ? 1.59 32 7 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.14 33 7 HB A THR 10 ? ? HG3 A GLU 12 ? ? 1.33 34 7 HD13 A LEU 45 ? ? HB2 A LEU 71 ? ? 1.33 35 7 HB3 A ASP 2 ? ? HB3 A PRO 16 ? ? 1.34 36 7 O A SER 59 ? ? H A LEU 63 ? ? 1.58 37 7 OD1 A ASP 39 ? ? HG1 A THR 41 ? ? 1.60 38 8 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.11 39 8 H A ASP 53 ? ? HG2 A ARG 56 ? ? 1.25 40 8 HG2 A LYS 66 ? ? H A ASP 68 ? ? 1.28 41 8 HB3 A ASP 44 ? ? HG13 A ILE 51 ? ? 1.34 42 9 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.12 43 9 HG2 A LYS 66 ? ? H A ASP 68 ? ? 1.27 44 9 H A ASP 2 ? ? HA A THR 67 ? ? 1.27 45 9 HG A LEU 52 ? ? HG1 A THR 57 ? ? 1.31 46 9 HB3 A MET 23 ? ? HD12 A LEU 60 ? ? 1.32 47 9 HD12 A LEU 45 ? ? HB3 A LEU 71 ? ? 1.34 48 10 HB2 A ASP 2 ? ? HB2 A PRO 16 ? ? 0.97 49 10 HB3 A MET 23 ? ? HD12 A LEU 60 ? ? 1.15 50 10 H A ASP 39 ? ? HD1 A HIS 43 ? ? 1.19 51 10 HA A LEU 60 ? ? HD13 A LEU 65 ? ? 1.25 52 10 HD13 A LEU 9 ? ? HA3 A GLY 75 ? ? 1.29 53 10 HG22 A THR 10 ? ? HG3 A GLU 12 ? ? 1.33 54 10 OD1 A ASP 39 ? ? HG1 A THR 41 ? ? 1.55 55 10 HG A SER 59 ? ? OE1 A GLU 62 ? ? 1.58 56 10 O A SER 59 ? ? H A LEU 63 ? ? 1.59 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.305 1.387 -0.082 0.013 N 2 1 CE2 A TYR 14 ? ? CD2 A TYR 14 ? ? 1.298 1.389 -0.091 0.015 N 3 1 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.284 1.387 -0.103 0.013 N 4 1 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.412 1.512 -0.100 0.015 N 5 1 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.291 1.389 -0.098 0.015 N 6 2 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.308 1.387 -0.079 0.013 N 7 2 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.286 1.387 -0.101 0.013 N 8 2 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.409 1.512 -0.103 0.015 N 9 2 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.293 1.389 -0.096 0.015 N 10 3 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.305 1.387 -0.082 0.013 N 11 3 CE2 A TYR 14 ? ? CD2 A TYR 14 ? ? 1.294 1.389 -0.095 0.015 N 12 3 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.405 1.512 -0.107 0.015 N 13 3 CG A TYR 47 ? ? CD1 A TYR 47 ? ? 1.302 1.387 -0.085 0.013 N 14 3 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.294 1.389 -0.095 0.015 N 15 4 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.289 1.387 -0.098 0.013 N 16 4 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.418 1.512 -0.094 0.015 N 17 4 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.290 1.389 -0.099 0.015 N 18 5 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.304 1.387 -0.083 0.013 N 19 5 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.285 1.387 -0.102 0.013 N 20 5 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.409 1.512 -0.103 0.015 N 21 5 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.292 1.389 -0.097 0.015 N 22 6 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.303 1.387 -0.084 0.013 N 23 6 CE2 A TYR 14 ? ? CD2 A TYR 14 ? ? 1.294 1.389 -0.095 0.015 N 24 6 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.283 1.387 -0.104 0.013 N 25 6 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.415 1.512 -0.097 0.015 N 26 6 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.289 1.389 -0.100 0.015 N 27 7 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.304 1.387 -0.083 0.013 N 28 7 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.404 1.512 -0.108 0.015 N 29 7 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.295 1.389 -0.094 0.015 N 30 8 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.282 1.387 -0.105 0.013 N 31 8 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.405 1.512 -0.107 0.015 N 32 8 CG A TYR 47 ? ? CD1 A TYR 47 ? ? 1.307 1.387 -0.080 0.013 N 33 8 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.294 1.389 -0.095 0.015 N 34 9 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.307 1.387 -0.080 0.013 N 35 9 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.291 1.387 -0.096 0.013 N 36 9 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.409 1.512 -0.103 0.015 N 37 9 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.290 1.389 -0.099 0.015 N 38 10 CG A TYR 14 ? ? CD2 A TYR 14 ? ? 1.300 1.387 -0.087 0.013 N 39 10 CE2 A TYR 14 ? ? CD2 A TYR 14 ? ? 1.294 1.389 -0.095 0.015 N 40 10 CG A TYR 46 ? ? CD1 A TYR 46 ? ? 1.289 1.387 -0.098 0.013 N 41 10 CB A TYR 47 ? ? CG A TYR 47 ? ? 1.409 1.512 -0.103 0.015 N 42 10 CG A TYR 47 ? ? CD1 A TYR 47 ? ? 1.308 1.387 -0.079 0.013 N 43 10 CD1 A TYR 47 ? ? CE1 A TYR 47 ? ? 1.292 1.389 -0.097 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 116.16 121.00 -4.84 0.60 N 2 1 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.20 121.00 6.20 0.60 N 3 1 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 112.18 121.00 -8.82 0.60 N 4 1 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.01 121.00 5.01 0.60 N 5 1 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.85 121.00 -8.15 0.60 N 6 2 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 116.40 121.00 -4.60 0.60 N 7 2 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.59 121.00 6.59 0.60 N 8 2 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 111.96 121.00 -9.04 0.60 N 9 2 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.02 121.00 5.02 0.60 N 10 2 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.59 121.00 -8.41 0.60 N 11 3 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.67 121.00 -5.33 0.60 N 12 3 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 115.66 121.00 -5.34 0.60 N 13 3 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.60 121.00 5.60 0.60 N 14 3 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 111.83 121.00 -9.17 0.60 N 15 4 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 116.78 121.00 -4.22 0.60 N 16 4 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.26 121.00 6.26 0.60 N 17 4 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 111.84 121.00 -9.16 0.60 N 18 4 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.21 121.00 5.21 0.60 N 19 4 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.68 121.00 -8.32 0.60 N 20 5 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.63 121.00 -5.37 0.60 N 21 5 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.57 121.00 6.57 0.60 N 22 5 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 111.60 121.00 -9.40 0.60 N 23 5 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.31 121.00 5.31 0.60 N 24 5 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.41 121.00 -8.59 0.60 N 25 6 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.83 121.00 -5.17 0.60 N 26 6 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.18 121.00 6.18 0.60 N 27 6 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 112.40 121.00 -8.60 0.60 N 28 6 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.45 121.00 5.45 0.60 N 29 6 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.48 121.00 -8.52 0.60 N 30 7 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 116.03 121.00 -4.97 0.60 N 31 7 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 116.03 121.00 -4.97 0.60 N 32 7 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 125.79 121.00 4.79 0.60 N 33 7 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.80 121.00 -8.20 0.60 N 34 8 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.81 121.00 -5.19 0.60 N 35 8 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 126.01 121.00 5.01 0.60 N 36 8 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 114.28 121.00 -6.72 0.60 N 37 8 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.35 121.00 5.35 0.60 N 38 8 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.29 121.00 -8.71 0.60 N 39 9 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.88 121.00 -5.12 0.60 N 40 9 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 126.56 121.00 5.56 0.60 N 41 9 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 113.24 121.00 -7.76 0.60 N 42 9 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 125.95 121.00 4.95 0.60 N 43 9 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.82 121.00 -8.18 0.60 N 44 10 CB A TYR 14 ? ? CG A TYR 14 ? ? CD2 A TYR 14 ? ? 115.47 121.00 -5.53 0.60 N 45 10 CB A TYR 46 ? ? CG A TYR 46 ? ? CD2 A TYR 46 ? ? 127.03 121.00 6.03 0.60 N 46 10 CB A TYR 46 ? ? CG A TYR 46 ? ? CD1 A TYR 46 ? ? 112.59 121.00 -8.41 0.60 N 47 10 CB A TYR 47 ? ? CG A TYR 47 ? ? CD2 A TYR 47 ? ? 126.50 121.00 5.50 0.60 N 48 10 CB A TYR 47 ? ? CG A TYR 47 ? ? CD1 A TYR 47 ? ? 112.12 121.00 -8.88 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 16 ? ? -55.70 97.43 2 1 LYS A 42 ? ? -161.98 83.97 3 1 ASN A 48 ? ? 66.43 -78.52 4 1 ARG A 56 ? ? -82.30 47.72 5 1 SER A 59 ? ? -69.21 -176.77 6 1 LYS A 66 ? ? -177.48 -156.46 7 1 LYS A 76 ? ? 66.18 -162.29 8 1 ILE A 77 ? ? -57.75 -72.77 9 1 ASN A 79 ? ? 166.65 -48.25 10 2 ASP A 39 ? ? -152.93 86.84 11 2 LYS A 42 ? ? -158.39 81.31 12 2 ASN A 48 ? ? 62.26 -75.78 13 2 ARG A 56 ? ? -90.50 36.99 14 2 SER A 59 ? ? -66.97 -178.90 15 2 LYS A 66 ? ? -175.97 -163.90 16 2 SER A 78 ? ? -137.72 -39.91 17 3 ASP A 39 ? ? -152.77 77.22 18 3 LYS A 42 ? ? -165.76 79.36 19 3 ASN A 48 ? ? 59.45 -83.13 20 3 MET A 49 ? ? -113.84 51.16 21 3 ASP A 50 ? ? 77.61 -167.62 22 3 ARG A 56 ? ? -80.70 47.27 23 3 LYS A 66 ? ? -172.72 -159.44 24 3 LYS A 76 ? ? 26.57 30.13 25 4 PRO A 16 ? ? -56.97 98.56 26 4 ASP A 39 ? ? -153.09 86.70 27 4 LYS A 42 ? ? -157.80 88.46 28 4 ASN A 48 ? ? 69.80 -79.68 29 4 LEU A 52 ? ? -54.69 -174.04 30 4 ARG A 56 ? ? 20.24 44.97 31 4 LYS A 66 ? ? -171.83 -157.43 32 4 ARG A 74 ? ? -125.78 -168.37 33 4 LYS A 76 ? ? -67.36 -163.37 34 5 LYS A 42 ? ? -164.43 92.18 35 5 ASN A 48 ? ? 67.17 -77.91 36 5 ARG A 56 ? ? -94.31 47.45 37 5 THR A 57 ? ? -77.83 37.56 38 5 LYS A 66 ? ? 168.10 -167.04 39 5 LYS A 76 ? ? 79.70 -171.22 40 5 ILE A 77 ? ? -49.14 -75.54 41 6 LYS A 42 ? ? -160.89 91.42 42 6 ASN A 48 ? ? 66.21 -77.82 43 6 ARG A 56 ? ? -96.18 39.96 44 6 LYS A 66 ? ? -179.73 -156.12 45 6 LYS A 76 ? ? 58.76 -155.13 46 6 ASN A 79 ? ? -173.22 113.00 47 7 PRO A 16 ? ? -43.94 101.39 48 7 LYS A 42 ? ? -164.49 90.58 49 7 ASN A 48 ? ? 44.24 -85.55 50 7 MET A 49 ? ? -97.60 34.70 51 7 ASP A 50 ? ? 92.38 -163.41 52 7 ARG A 56 ? ? -81.70 48.17 53 7 LYS A 66 ? ? -174.91 -160.48 54 7 LYS A 76 ? ? -69.91 3.50 55 7 SER A 78 ? ? -102.13 -70.29 56 8 PRO A 16 ? ? -60.91 99.46 57 8 ASN A 48 ? ? 60.57 -79.65 58 8 MET A 49 ? ? -119.50 50.46 59 8 ASP A 50 ? ? 82.76 -171.17 60 8 ARG A 56 ? ? -92.32 38.52 61 8 LYS A 66 ? ? -169.92 -165.52 62 8 LYS A 76 ? ? 69.50 -168.00 63 9 ASP A 39 ? ? -153.48 85.24 64 9 LYS A 42 ? ? -163.91 80.32 65 9 ASN A 48 ? ? 44.70 -84.98 66 9 MET A 49 ? ? -97.06 35.08 67 9 ASP A 50 ? ? 87.75 -171.71 68 9 LEU A 52 ? ? -54.80 179.56 69 9 ARG A 56 ? ? 34.31 91.60 70 9 THR A 57 ? ? 91.52 118.78 71 9 LYS A 66 ? ? -179.84 -157.67 72 9 ARG A 74 ? ? -123.21 -168.78 73 9 LYS A 76 ? ? 63.84 -169.96 74 9 ILE A 77 ? ? -73.91 -80.87 75 10 LYS A 42 ? ? -159.61 89.91 76 10 ASN A 48 ? ? 61.26 -79.48 77 10 MET A 49 ? ? -118.91 52.35 78 10 ASP A 50 ? ? 82.77 -160.94 79 10 LEU A 52 ? ? -56.43 -177.50 80 10 ARG A 56 ? ? 26.31 41.76 81 10 THR A 57 ? ? -118.48 58.44 82 10 LYS A 66 ? ? -161.37 -160.73 83 10 LYS A 76 ? ? 27.18 52.20 84 10 ASN A 79 ? ? -159.72 83.62 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 3 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 74 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.083 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -10 ? A MET 1 2 1 Y 1 A ARG -9 ? A ARG 2 3 1 Y 1 A GLY -8 ? A GLY 3 4 1 Y 1 A SER -7 ? A SER 4 5 1 Y 1 A HIS -6 ? A HIS 5 6 1 Y 1 A HIS -5 ? A HIS 6 7 1 Y 1 A HIS -4 ? A HIS 7 8 1 Y 1 A HIS -3 ? A HIS 8 9 1 Y 1 A HIS -2 ? A HIS 9 10 1 Y 1 A HIS -1 ? A HIS 10 11 1 Y 1 A GLY 0 ? A GLY 11 12 1 Y 1 A SER 1 ? A SER 12 13 1 Y 1 A LYS 81 ? A LYS 92 14 1 Y 1 A LEU 82 ? A LEU 93 15 1 Y 1 A ASN 83 ? A ASN 94 16 2 Y 1 A MET -10 ? A MET 1 17 2 Y 1 A ARG -9 ? A ARG 2 18 2 Y 1 A GLY -8 ? A GLY 3 19 2 Y 1 A SER -7 ? A SER 4 20 2 Y 1 A HIS -6 ? A HIS 5 21 2 Y 1 A HIS -5 ? A HIS 6 22 2 Y 1 A HIS -4 ? A HIS 7 23 2 Y 1 A HIS -3 ? A HIS 8 24 2 Y 1 A HIS -2 ? A HIS 9 25 2 Y 1 A HIS -1 ? A HIS 10 26 2 Y 1 A GLY 0 ? A GLY 11 27 2 Y 1 A SER 1 ? A SER 12 28 2 Y 1 A LYS 81 ? A LYS 92 29 2 Y 1 A LEU 82 ? A LEU 93 30 2 Y 1 A ASN 83 ? A ASN 94 31 3 Y 1 A MET -10 ? A MET 1 32 3 Y 1 A ARG -9 ? A ARG 2 33 3 Y 1 A GLY -8 ? A GLY 3 34 3 Y 1 A SER -7 ? A SER 4 35 3 Y 1 A HIS -6 ? A HIS 5 36 3 Y 1 A HIS -5 ? A HIS 6 37 3 Y 1 A HIS -4 ? A HIS 7 38 3 Y 1 A HIS -3 ? A HIS 8 39 3 Y 1 A HIS -2 ? A HIS 9 40 3 Y 1 A HIS -1 ? A HIS 10 41 3 Y 1 A GLY 0 ? A GLY 11 42 3 Y 1 A SER 1 ? A SER 12 43 3 Y 1 A LYS 81 ? A LYS 92 44 3 Y 1 A LEU 82 ? A LEU 93 45 3 Y 1 A ASN 83 ? A ASN 94 46 4 Y 1 A MET -10 ? A MET 1 47 4 Y 1 A ARG -9 ? A ARG 2 48 4 Y 1 A GLY -8 ? A GLY 3 49 4 Y 1 A SER -7 ? A SER 4 50 4 Y 1 A HIS -6 ? A HIS 5 51 4 Y 1 A HIS -5 ? A HIS 6 52 4 Y 1 A HIS -4 ? A HIS 7 53 4 Y 1 A HIS -3 ? A HIS 8 54 4 Y 1 A HIS -2 ? A HIS 9 55 4 Y 1 A HIS -1 ? A HIS 10 56 4 Y 1 A GLY 0 ? A GLY 11 57 4 Y 1 A SER 1 ? A SER 12 58 4 Y 1 A LYS 81 ? A LYS 92 59 4 Y 1 A LEU 82 ? A LEU 93 60 4 Y 1 A ASN 83 ? A ASN 94 61 5 Y 1 A MET -10 ? A MET 1 62 5 Y 1 A ARG -9 ? A ARG 2 63 5 Y 1 A GLY -8 ? A GLY 3 64 5 Y 1 A SER -7 ? A SER 4 65 5 Y 1 A HIS -6 ? A HIS 5 66 5 Y 1 A HIS -5 ? A HIS 6 67 5 Y 1 A HIS -4 ? A HIS 7 68 5 Y 1 A HIS -3 ? A HIS 8 69 5 Y 1 A HIS -2 ? A HIS 9 70 5 Y 1 A HIS -1 ? A HIS 10 71 5 Y 1 A GLY 0 ? A GLY 11 72 5 Y 1 A SER 1 ? A SER 12 73 5 Y 1 A LYS 81 ? A LYS 92 74 5 Y 1 A LEU 82 ? A LEU 93 75 5 Y 1 A ASN 83 ? A ASN 94 76 6 Y 1 A MET -10 ? A MET 1 77 6 Y 1 A ARG -9 ? A ARG 2 78 6 Y 1 A GLY -8 ? A GLY 3 79 6 Y 1 A SER -7 ? A SER 4 80 6 Y 1 A HIS -6 ? A HIS 5 81 6 Y 1 A HIS -5 ? A HIS 6 82 6 Y 1 A HIS -4 ? A HIS 7 83 6 Y 1 A HIS -3 ? A HIS 8 84 6 Y 1 A HIS -2 ? A HIS 9 85 6 Y 1 A HIS -1 ? A HIS 10 86 6 Y 1 A GLY 0 ? A GLY 11 87 6 Y 1 A SER 1 ? A SER 12 88 6 Y 1 A LYS 81 ? A LYS 92 89 6 Y 1 A LEU 82 ? A LEU 93 90 6 Y 1 A ASN 83 ? A ASN 94 91 7 Y 1 A MET -10 ? A MET 1 92 7 Y 1 A ARG -9 ? A ARG 2 93 7 Y 1 A GLY -8 ? A GLY 3 94 7 Y 1 A SER -7 ? A SER 4 95 7 Y 1 A HIS -6 ? A HIS 5 96 7 Y 1 A HIS -5 ? A HIS 6 97 7 Y 1 A HIS -4 ? A HIS 7 98 7 Y 1 A HIS -3 ? A HIS 8 99 7 Y 1 A HIS -2 ? A HIS 9 100 7 Y 1 A HIS -1 ? A HIS 10 101 7 Y 1 A GLY 0 ? A GLY 11 102 7 Y 1 A SER 1 ? A SER 12 103 7 Y 1 A LYS 81 ? A LYS 92 104 7 Y 1 A LEU 82 ? A LEU 93 105 7 Y 1 A ASN 83 ? A ASN 94 106 8 Y 1 A MET -10 ? A MET 1 107 8 Y 1 A ARG -9 ? A ARG 2 108 8 Y 1 A GLY -8 ? A GLY 3 109 8 Y 1 A SER -7 ? A SER 4 110 8 Y 1 A HIS -6 ? A HIS 5 111 8 Y 1 A HIS -5 ? A HIS 6 112 8 Y 1 A HIS -4 ? A HIS 7 113 8 Y 1 A HIS -3 ? A HIS 8 114 8 Y 1 A HIS -2 ? A HIS 9 115 8 Y 1 A HIS -1 ? A HIS 10 116 8 Y 1 A GLY 0 ? A GLY 11 117 8 Y 1 A SER 1 ? A SER 12 118 8 Y 1 A LYS 81 ? A LYS 92 119 8 Y 1 A LEU 82 ? A LEU 93 120 8 Y 1 A ASN 83 ? A ASN 94 121 9 Y 1 A MET -10 ? A MET 1 122 9 Y 1 A ARG -9 ? A ARG 2 123 9 Y 1 A GLY -8 ? A GLY 3 124 9 Y 1 A SER -7 ? A SER 4 125 9 Y 1 A HIS -6 ? A HIS 5 126 9 Y 1 A HIS -5 ? A HIS 6 127 9 Y 1 A HIS -4 ? A HIS 7 128 9 Y 1 A HIS -3 ? A HIS 8 129 9 Y 1 A HIS -2 ? A HIS 9 130 9 Y 1 A HIS -1 ? A HIS 10 131 9 Y 1 A GLY 0 ? A GLY 11 132 9 Y 1 A SER 1 ? A SER 12 133 9 Y 1 A LYS 81 ? A LYS 92 134 9 Y 1 A LEU 82 ? A LEU 93 135 9 Y 1 A ASN 83 ? A ASN 94 136 10 Y 1 A MET -10 ? A MET 1 137 10 Y 1 A ARG -9 ? A ARG 2 138 10 Y 1 A GLY -8 ? A GLY 3 139 10 Y 1 A SER -7 ? A SER 4 140 10 Y 1 A HIS -6 ? A HIS 5 141 10 Y 1 A HIS -5 ? A HIS 6 142 10 Y 1 A HIS -4 ? A HIS 7 143 10 Y 1 A HIS -3 ? A HIS 8 144 10 Y 1 A HIS -2 ? A HIS 9 145 10 Y 1 A HIS -1 ? A HIS 10 146 10 Y 1 A GLY 0 ? A GLY 11 147 10 Y 1 A SER 1 ? A SER 12 148 10 Y 1 A LYS 81 ? A LYS 92 149 10 Y 1 A LEU 82 ? A LEU 93 150 10 Y 1 A ASN 83 ? A ASN 94 #