HEADER CELL ADHESION 05-AUG-14 2MSU TITLE NMR STRUCTURE OF KINDLIN-2 F2 339-358 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERMITIN FAMILY HOMOLOG 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 339-358; COMPND 5 SYNONYM: KINDLIN-2, MITOGEN-INDUCIBLE GENE 2 PROTEIN, MIG-2, COMPND 6 PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY C MEMBER 1, PH DOMAIN- COMPND 7 CONTAINING FAMILY C MEMBER 1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FERMT2, KIND2, MIG2, PLEKHC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS FOCAL ADHESION, ILK, INTEGRIN, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 19 AUTHOR K.FUKUDA,K.BLEDZKA,J.YANG,H.D.PERERA REVDAT 4 14-JUN-23 2MSU 1 REMARK REVDAT 3 29-OCT-14 2MSU 1 JRNL REVDAT 2 10-SEP-14 2MSU 1 JRNL REVDAT 1 27-AUG-14 2MSU 0 JRNL AUTH K.FUKUDA,K.BLEDZKA,J.YANG,H.D.PERERA,E.F.PLOW,J.QIN JRNL TITL MOLECULAR BASIS OF KINDLIN-2 BINDING TO INTEGRIN-LINKED JRNL TITL 2 KINASE PSEUDOKINASE FOR REGULATING CELL ADHESION. JRNL REF J.BIOL.CHEM. V. 289 28363 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 25160619 JRNL DOI 10.1074/JBC.M114.596692 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.25, XPLOR-NIH 2.25 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (XPLOR REMARK 3 -NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MSU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000104004. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM HEPES, 100 MM SODIUM REMARK 210 CHLORIDE, 2 MM DTT, 2 MM K2F2 REMARK 210 PEPTIDE, 50 UM ILK KLD/A-PARVIN REMARK 210 CH2, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 99 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 341 -26.77 -167.77 REMARK 500 1 GLU A 342 -83.04 -40.94 REMARK 500 1 ASP A 344 -174.80 75.17 REMARK 500 2 LYS A 341 -27.24 -168.85 REMARK 500 2 GLU A 342 -82.62 -41.91 REMARK 500 2 ASP A 344 -173.93 83.98 REMARK 500 2 VAL A 346 -5.74 -149.36 REMARK 500 3 ASP A 340 -88.84 -49.51 REMARK 500 3 LYS A 341 -27.62 74.08 REMARK 500 3 GLU A 342 -81.31 -47.32 REMARK 500 3 ASP A 344 -174.80 79.01 REMARK 500 4 GLU A 342 -85.38 -104.50 REMARK 500 4 ASP A 344 -178.55 90.61 REMARK 500 5 ASP A 340 -141.60 -74.83 REMARK 500 5 LYS A 341 -43.94 70.54 REMARK 500 5 GLU A 342 -80.55 -33.57 REMARK 500 5 ASP A 344 -174.66 71.99 REMARK 500 6 GLU A 342 -79.65 -33.56 REMARK 500 6 ASP A 344 -167.61 69.95 REMARK 500 7 LYS A 341 -166.77 53.16 REMARK 500 7 GLU A 342 -65.51 67.70 REMARK 500 7 ASP A 344 -172.45 79.49 REMARK 500 8 LYS A 341 -18.60 76.57 REMARK 500 8 GLU A 342 -77.83 -44.83 REMARK 500 8 ASP A 344 167.90 127.88 REMARK 500 9 GLU A 342 -64.52 67.94 REMARK 500 9 VAL A 343 0.22 -69.34 REMARK 500 9 ASP A 344 174.01 179.97 REMARK 500 10 ASP A 340 -35.08 -173.66 REMARK 500 10 GLU A 342 -77.28 -35.49 REMARK 500 10 ASP A 344 -173.43 69.34 REMARK 500 11 ASP A 340 -30.03 -149.58 REMARK 500 11 LYS A 341 -126.98 62.10 REMARK 500 11 GLU A 342 -68.69 59.55 REMARK 500 12 LYS A 341 -151.40 -91.18 REMARK 500 12 GLU A 342 -71.39 63.32 REMARK 500 12 VAL A 346 -18.31 -156.09 REMARK 500 13 GLU A 342 -66.38 66.13 REMARK 500 13 ASP A 344 -174.58 59.12 REMARK 500 14 ASP A 340 -136.77 51.01 REMARK 500 14 LYS A 341 -27.42 74.26 REMARK 500 14 GLU A 342 -82.94 -44.00 REMARK 500 14 ASP A 344 -179.04 77.18 REMARK 500 15 ASP A 340 -167.89 53.18 REMARK 500 15 GLU A 342 -63.01 -139.37 REMARK 500 15 ASP A 344 -162.31 53.53 REMARK 500 15 GLU A 345 27.57 49.65 REMARK 500 16 ASP A 340 -179.08 -55.92 REMARK 500 16 LYS A 341 -9.67 72.68 REMARK 500 16 GLU A 342 -83.16 -44.15 REMARK 500 REMARK 500 THIS ENTRY HAS 66 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25131 RELATED DB: BMRB DBREF 2MSU A 339 358 UNP Q96AC1 FERM2_HUMAN 339 358 SEQRES 1 A 20 SER ASP LYS GLU VAL ASP GLU VAL ASP ALA ALA LEU SER SEQRES 2 A 20 ASP LEU GLU ILE THR LEU GLU HELIX 1 1 LEU A 353 GLU A 358 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1