HEADER TRANSCRIPTION 12-AUG-14 2MT3 TITLE STRUCTURE OF -24 DNA BINDING DOMAIN OF SIGMA 54 FROM E.COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA POLYMERASE SIGMA-54 FACTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 414-477; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: RPON, BN17_31451, BU34_12270, CF57_03485, CF58_26305, SOURCE 5 CF59_26290, CF60_25835, CF61_04260, ECS4081, LF82_1964; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET29A KEYWDS TRANSCRIPTION REGULATION, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.WEMMER,Z.GAO,J.PELTON REVDAT 4 14-JUN-23 2MT3 1 SEQADV REVDAT 3 15-FEB-17 2MT3 1 JRNL REVDAT 2 14-DEC-16 2MT3 1 TITLE REVDAT 1 26-AUG-15 2MT3 0 JRNL AUTH Z.GAO,J.PELTON,D.WEMMER JRNL TITL STRUCTURE OF -24 DNA BINDING DOMAIN OF SIGMA 54 FROM E.COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000104012. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 200 MM REMARK 210 SODIUM CHLORIDE, 1 MM DTT, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D C(CO)NH; 3D HNCA; 3D HNCACB; REMARK 210 3D H(CCO)NH; 3D HCCH-TOCSY; 3D REMARK 210 HNHA; 3D 1H-15N NOESY; 3D 1H-15N REMARK 210 TOCSY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D HCCH-COSY; 3D HCACO; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 432 73.77 -113.19 REMARK 500 1 LEU A 437 28.91 -176.78 REMARK 500 1 ASP A 439 -158.91 -66.98 REMARK 500 1 SER A 440 -64.10 75.20 REMARK 500 1 MET A 452 73.16 -164.78 REMARK 500 1 SER A 466 79.25 51.39 REMARK 500 1 GLN A 475 -74.12 -52.84 REMARK 500 1 LEU A 476 48.28 -158.03 REMARK 500 1 ALA A 478 100.98 -170.39 REMARK 500 1 HIS A 493 36.96 -170.62 REMARK 500 2 ALA A 430 66.32 -150.44 REMARK 500 2 ASN A 432 67.19 -118.56 REMARK 500 2 MET A 452 75.18 -165.31 REMARK 500 2 SER A 464 77.30 -158.36 REMARK 500 2 SER A 466 -48.61 77.55 REMARK 500 2 SER A 470 60.01 -160.02 REMARK 500 2 GLN A 475 158.24 63.99 REMARK 500 2 SER A 482 46.03 -151.95 REMARK 500 2 HIS A 492 -69.37 72.32 REMARK 500 2 HIS A 493 -178.66 60.36 REMARK 500 2 HIS A 494 80.08 57.43 REMARK 500 3 ALA A 430 45.82 -109.48 REMARK 500 3 ASN A 432 77.73 -112.39 REMARK 500 3 PRO A 433 0.08 -69.71 REMARK 500 3 LEU A 437 -38.47 -160.99 REMARK 500 3 SER A 440 -39.00 -132.20 REMARK 500 3 MET A 452 73.93 -159.02 REMARK 500 3 SER A 466 78.63 57.29 REMARK 500 3 ASN A 471 23.12 -156.75 REMARK 500 3 ALA A 478 135.51 -175.49 REMARK 500 3 SER A 482 48.69 -148.02 REMARK 500 3 HIS A 493 176.53 61.61 REMARK 500 4 ASN A 432 78.04 -158.35 REMARK 500 4 ALA A 434 -72.52 73.09 REMARK 500 4 LEU A 437 32.05 -158.08 REMARK 500 4 ASP A 439 69.78 -101.60 REMARK 500 4 SER A 464 58.20 -144.33 REMARK 500 4 SER A 466 77.70 51.41 REMARK 500 4 GLN A 475 -169.94 -67.46 REMARK 500 4 SER A 482 60.73 -168.42 REMARK 500 4 ASP A 484 63.35 63.33 REMARK 500 4 LYS A 485 96.08 -176.93 REMARK 500 4 HIS A 493 127.33 -178.58 REMARK 500 4 HIS A 495 -65.46 -140.60 REMARK 500 4 HIS A 496 178.25 61.84 REMARK 500 5 ALA A 434 -71.99 -46.31 REMARK 500 5 MET A 452 79.31 -156.72 REMARK 500 5 SER A 466 -54.30 76.30 REMARK 500 5 SER A 470 35.73 -178.91 REMARK 500 5 VAL A 483 -69.53 71.56 REMARK 500 REMARK 500 THIS ENTRY HAS 201 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25147 RELATED DB: BMRB DBREF 2MT3 A 414 477 UNP C3SS82 C3SS82_ECOLX 414 477 SEQADV 2MT3 ALA A 478 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 ASN A 479 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 SER A 480 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 SER A 481 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 SER A 482 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 VAL A 483 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 ASP A 484 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 LYS A 485 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 LEU A 486 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 ALA A 487 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 ALA A 488 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 ALA A 489 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 LEU A 490 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 GLU A 491 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 492 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 493 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 494 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 495 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 496 UNP C3SS82 EXPRESSION TAG SEQADV 2MT3 HIS A 497 UNP C3SS82 EXPRESSION TAG SEQRES 1 A 84 GLU ALA SER SER THR ALA ILE ARG ALA LEU VAL LYS LYS SEQRES 2 A 84 LEU ILE ALA ALA GLU ASN PRO ALA LYS PRO LEU SER ASP SEQRES 3 A 84 SER LYS LEU THR SER LEU LEU SER GLU GLN GLY ILE MET SEQRES 4 A 84 VAL ALA ARG ARG THR VAL ALA LYS TYR ARG GLU SER LEU SEQRES 5 A 84 SER ILE PRO PRO SER ASN GLN ARG LYS GLN LEU VAL ALA SEQRES 6 A 84 ASN SER SER SER VAL ASP LYS LEU ALA ALA ALA LEU GLU SEQRES 7 A 84 HIS HIS HIS HIS HIS HIS HELIX 1 1 ALA A 415 ILE A 420 1 6 HELIX 2 2 ALA A 422 ALA A 430 1 9 HELIX 3 3 SER A 440 GLU A 448 1 9 HELIX 4 4 VAL A 453 SER A 466 1 14 HELIX 5 5 LEU A 486 GLU A 491 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1