data_2MTD # _entry.id 2MTD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MTD pdb_00002mtd 10.2210/pdb2mtd/pdb RCSB RCSB104021 ? ? BMRB 25157 ? ? WWPDB D_1000104021 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 25157 BMRB unspecified . 2MTC PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MTD _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-08-16 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, X.' 1 'Morgan, A.' 2 # _citation.id primary _citation.title ;Structural mechanisms underlying sequence-dependent variations in GAG affinities of decorin binding protein A, a Borrelia burgdorferi adhesin. ; _citation.journal_abbrev Biochem.J. _citation.journal_volume 467 _citation.page_first 439 _citation.page_last 451 _citation.year 2015 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25695518 _citation.pdbx_database_id_DOI 10.1042/BJ20141201 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morgan, A.M.' 1 ? primary 'Wang, X.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Decorin binding protein A' _entity.formula_weight 17899.670 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 55-218' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLTGETKIRLESSAQEIKDEINKIKANAKKEGVKFEAFTNTQTGSKISEKPEFILKAKIKAIQVAERFVKAIKEEAEKLK KSGSSGAFSAMYDLMIDVSKPLEEIGIQKMTGTVKEAAQKTPATTADGIIAIAQAMEDKLNNVNKKQHDALKNLKEKAKT ATTT ; _entity_poly.pdbx_seq_one_letter_code_can ;GLTGETKIRLESSAQEIKDEINKIKANAKKEGVKFEAFTNTQTGSKISEKPEFILKAKIKAIQVAERFVKAIKEEAEKLK KSGSSGAFSAMYDLMIDVSKPLEEIGIQKMTGTVKEAAQKTPATTADGIIAIAQAMEDKLNNVNKKQHDALKNLKEKAKT ATTT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 THR n 1 4 GLY n 1 5 GLU n 1 6 THR n 1 7 LYS n 1 8 ILE n 1 9 ARG n 1 10 LEU n 1 11 GLU n 1 12 SER n 1 13 SER n 1 14 ALA n 1 15 GLN n 1 16 GLU n 1 17 ILE n 1 18 LYS n 1 19 ASP n 1 20 GLU n 1 21 ILE n 1 22 ASN n 1 23 LYS n 1 24 ILE n 1 25 LYS n 1 26 ALA n 1 27 ASN n 1 28 ALA n 1 29 LYS n 1 30 LYS n 1 31 GLU n 1 32 GLY n 1 33 VAL n 1 34 LYS n 1 35 PHE n 1 36 GLU n 1 37 ALA n 1 38 PHE n 1 39 THR n 1 40 ASN n 1 41 THR n 1 42 GLN n 1 43 THR n 1 44 GLY n 1 45 SER n 1 46 LYS n 1 47 ILE n 1 48 SER n 1 49 GLU n 1 50 LYS n 1 51 PRO n 1 52 GLU n 1 53 PHE n 1 54 ILE n 1 55 LEU n 1 56 LYS n 1 57 ALA n 1 58 LYS n 1 59 ILE n 1 60 LYS n 1 61 ALA n 1 62 ILE n 1 63 GLN n 1 64 VAL n 1 65 ALA n 1 66 GLU n 1 67 ARG n 1 68 PHE n 1 69 VAL n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 LYS n 1 74 GLU n 1 75 GLU n 1 76 ALA n 1 77 GLU n 1 78 LYS n 1 79 LEU n 1 80 LYS n 1 81 LYS n 1 82 SER n 1 83 GLY n 1 84 SER n 1 85 SER n 1 86 GLY n 1 87 ALA n 1 88 PHE n 1 89 SER n 1 90 ALA n 1 91 MET n 1 92 TYR n 1 93 ASP n 1 94 LEU n 1 95 MET n 1 96 ILE n 1 97 ASP n 1 98 VAL n 1 99 SER n 1 100 LYS n 1 101 PRO n 1 102 LEU n 1 103 GLU n 1 104 GLU n 1 105 ILE n 1 106 GLY n 1 107 ILE n 1 108 GLN n 1 109 LYS n 1 110 MET n 1 111 THR n 1 112 GLY n 1 113 THR n 1 114 VAL n 1 115 LYS n 1 116 GLU n 1 117 ALA n 1 118 ALA n 1 119 GLN n 1 120 LYS n 1 121 THR n 1 122 PRO n 1 123 ALA n 1 124 THR n 1 125 THR n 1 126 ALA n 1 127 ASP n 1 128 GLY n 1 129 ILE n 1 130 ILE n 1 131 ALA n 1 132 ILE n 1 133 ALA n 1 134 GLN n 1 135 ALA n 1 136 MET n 1 137 GLU n 1 138 ASP n 1 139 LYS n 1 140 LEU n 1 141 ASN n 1 142 ASN n 1 143 VAL n 1 144 ASN n 1 145 LYS n 1 146 LYS n 1 147 GLN n 1 148 HIS n 1 149 ASP n 1 150 ALA n 1 151 LEU n 1 152 LYS n 1 153 ASN n 1 154 LEU n 1 155 LYS n 1 156 GLU n 1 157 LYS n 1 158 ALA n 1 159 LYS n 1 160 THR n 1 161 ALA n 1 162 THR n 1 163 THR n 1 164 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BGAPBR_A0025, dbp' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PBr _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Borrelia garinii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 498743 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHUE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B8F1J8_BORGR _struct_ref.pdbx_db_accession B8F1J8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLTGETKIRLESSAQEIKDEINKIKANAKKEGVKFEAFTNTQTGSKISEKPEFILKAKIKAIQVAERFVKAIKEEAEKLK KSGSSGAFSAMYDLMIDVSKPLEEIGIQKMTGTVKEAAQKTPATTADGIIAIAQAMEDKLNNVNKKQHDALKNLKEKAKT ATTT ; _struct_ref.pdbx_align_begin 55 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MTD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B8F1J8 _struct_ref_seq.db_align_beg 55 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 185 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-15N HSQC' 1 3 1 '3D 1H-13C NOESY aliphatic' 1 4 1 '3D HNCACB' 1 5 1 '3D CBCA(CO)NH' 1 6 1 '3D H(CCO)NH' 1 7 1 '3D C(CO)NH' 1 8 1 '3D 1H-13C NOESY' 1 9 1 '3D 1H-15N NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.8 mM [U-100% 13C; U-100% 15N] PBr, 50 mM sodium phosphate, 150 mM sodium chloride, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian INOVA 1 'Varian INOVA' 600 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MTD _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MTD _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MTD _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 'Johnson, One Moon Scientific' 'data analysis' NMRView ? 2 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 3 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MTD _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MTD _struct.title 'Strcucture of Decorin Binding Protein A from strain PBr of Borrelia garinii' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MTD _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'adhesin, glycosaminoglycan-binding protein, lipoprotein, Protein binding' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? ARG A 9 ? GLY A 25 ARG A 30 1 ? 6 HELX_P HELX_P2 2 ALA A 14 ? GLY A 32 ? ALA A 35 GLY A 53 1 ? 19 HELX_P HELX_P3 3 GLU A 36 ? GLU A 49 ? GLU A 57 GLU A 70 1 ? 14 HELX_P HELX_P4 4 PHE A 53 ? LYS A 81 ? PHE A 74 LYS A 102 1 ? 29 HELX_P HELX_P5 5 SER A 84 ? GLU A 103 ? SER A 105 GLU A 124 1 ? 20 HELX_P HELX_P6 6 GLU A 104 ? GLY A 106 ? GLU A 125 GLY A 127 5 ? 3 HELX_P HELX_P7 7 ILE A 107 ? THR A 121 ? ILE A 128 THR A 142 1 ? 15 HELX_P HELX_P8 8 THR A 125 ? LYS A 157 ? THR A 146 LYS A 178 1 ? 33 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2MTD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 22 22 GLY GLY A . n A 1 2 LEU 2 23 23 LEU LEU A . n A 1 3 THR 3 24 24 THR THR A . n A 1 4 GLY 4 25 25 GLY GLY A . n A 1 5 GLU 5 26 26 GLU GLU A . n A 1 6 THR 6 27 27 THR THR A . n A 1 7 LYS 7 28 28 LYS LYS A . n A 1 8 ILE 8 29 29 ILE ILE A . n A 1 9 ARG 9 30 30 ARG ARG A . n A 1 10 LEU 10 31 31 LEU LEU A . n A 1 11 GLU 11 32 32 GLU GLU A . n A 1 12 SER 12 33 33 SER SER A . n A 1 13 SER 13 34 34 SER SER A . n A 1 14 ALA 14 35 35 ALA ALA A . n A 1 15 GLN 15 36 36 GLN GLN A . n A 1 16 GLU 16 37 37 GLU GLU A . n A 1 17 ILE 17 38 38 ILE ILE A . n A 1 18 LYS 18 39 39 LYS LYS A . n A 1 19 ASP 19 40 40 ASP ASP A . n A 1 20 GLU 20 41 41 GLU GLU A . n A 1 21 ILE 21 42 42 ILE ILE A . n A 1 22 ASN 22 43 43 ASN ASN A . n A 1 23 LYS 23 44 44 LYS LYS A . n A 1 24 ILE 24 45 45 ILE ILE A . n A 1 25 LYS 25 46 46 LYS LYS A . n A 1 26 ALA 26 47 47 ALA ALA A . n A 1 27 ASN 27 48 48 ASN ASN A . n A 1 28 ALA 28 49 49 ALA ALA A . n A 1 29 LYS 29 50 50 LYS LYS A . n A 1 30 LYS 30 51 51 LYS LYS A . n A 1 31 GLU 31 52 52 GLU GLU A . n A 1 32 GLY 32 53 53 GLY GLY A . n A 1 33 VAL 33 54 54 VAL VAL A . n A 1 34 LYS 34 55 55 LYS LYS A . n A 1 35 PHE 35 56 56 PHE PHE A . n A 1 36 GLU 36 57 57 GLU GLU A . n A 1 37 ALA 37 58 58 ALA ALA A . n A 1 38 PHE 38 59 59 PHE PHE A . n A 1 39 THR 39 60 60 THR THR A . n A 1 40 ASN 40 61 61 ASN ASN A . n A 1 41 THR 41 62 62 THR THR A . n A 1 42 GLN 42 63 63 GLN GLN A . n A 1 43 THR 43 64 64 THR THR A . n A 1 44 GLY 44 65 65 GLY GLY A . n A 1 45 SER 45 66 66 SER SER A . n A 1 46 LYS 46 67 67 LYS LYS A . n A 1 47 ILE 47 68 68 ILE ILE A . n A 1 48 SER 48 69 69 SER SER A . n A 1 49 GLU 49 70 70 GLU GLU A . n A 1 50 LYS 50 71 71 LYS LYS A . n A 1 51 PRO 51 72 72 PRO PRO A . n A 1 52 GLU 52 73 73 GLU GLU A . n A 1 53 PHE 53 74 74 PHE PHE A . n A 1 54 ILE 54 75 75 ILE ILE A . n A 1 55 LEU 55 76 76 LEU LEU A . n A 1 56 LYS 56 77 77 LYS LYS A . n A 1 57 ALA 57 78 78 ALA ALA A . n A 1 58 LYS 58 79 79 LYS LYS A . n A 1 59 ILE 59 80 80 ILE ILE A . n A 1 60 LYS 60 81 81 LYS LYS A . n A 1 61 ALA 61 82 82 ALA ALA A . n A 1 62 ILE 62 83 83 ILE ILE A . n A 1 63 GLN 63 84 84 GLN GLN A . n A 1 64 VAL 64 85 85 VAL VAL A . n A 1 65 ALA 65 86 86 ALA ALA A . n A 1 66 GLU 66 87 87 GLU GLU A . n A 1 67 ARG 67 88 88 ARG ARG A . n A 1 68 PHE 68 89 89 PHE PHE A . n A 1 69 VAL 69 90 90 VAL VAL A . n A 1 70 LYS 70 91 91 LYS LYS A . n A 1 71 ALA 71 92 92 ALA ALA A . n A 1 72 ILE 72 93 93 ILE ILE A . n A 1 73 LYS 73 94 94 LYS LYS A . n A 1 74 GLU 74 95 95 GLU GLU A . n A 1 75 GLU 75 96 96 GLU GLU A . n A 1 76 ALA 76 97 97 ALA ALA A . n A 1 77 GLU 77 98 98 GLU GLU A . n A 1 78 LYS 78 99 99 LYS LYS A . n A 1 79 LEU 79 100 100 LEU LEU A . n A 1 80 LYS 80 101 101 LYS LYS A . n A 1 81 LYS 81 102 102 LYS LYS A . n A 1 82 SER 82 103 103 SER SER A . n A 1 83 GLY 83 104 104 GLY GLY A . n A 1 84 SER 84 105 105 SER SER A . n A 1 85 SER 85 106 106 SER SER A . n A 1 86 GLY 86 107 107 GLY GLY A . n A 1 87 ALA 87 108 108 ALA ALA A . n A 1 88 PHE 88 109 109 PHE PHE A . n A 1 89 SER 89 110 110 SER SER A . n A 1 90 ALA 90 111 111 ALA ALA A . n A 1 91 MET 91 112 112 MET MET A . n A 1 92 TYR 92 113 113 TYR TYR A . n A 1 93 ASP 93 114 114 ASP ASP A . n A 1 94 LEU 94 115 115 LEU LEU A . n A 1 95 MET 95 116 116 MET MET A . n A 1 96 ILE 96 117 117 ILE ILE A . n A 1 97 ASP 97 118 118 ASP ASP A . n A 1 98 VAL 98 119 119 VAL VAL A . n A 1 99 SER 99 120 120 SER SER A . n A 1 100 LYS 100 121 121 LYS LYS A . n A 1 101 PRO 101 122 122 PRO PRO A . n A 1 102 LEU 102 123 123 LEU LEU A . n A 1 103 GLU 103 124 124 GLU GLU A . n A 1 104 GLU 104 125 125 GLU GLU A . n A 1 105 ILE 105 126 126 ILE ILE A . n A 1 106 GLY 106 127 127 GLY GLY A . n A 1 107 ILE 107 128 128 ILE ILE A . n A 1 108 GLN 108 129 129 GLN GLN A . n A 1 109 LYS 109 130 130 LYS LYS A . n A 1 110 MET 110 131 131 MET MET A . n A 1 111 THR 111 132 132 THR THR A . n A 1 112 GLY 112 133 133 GLY GLY A . n A 1 113 THR 113 134 134 THR THR A . n A 1 114 VAL 114 135 135 VAL VAL A . n A 1 115 LYS 115 136 136 LYS LYS A . n A 1 116 GLU 116 137 137 GLU GLU A . n A 1 117 ALA 117 138 138 ALA ALA A . n A 1 118 ALA 118 139 139 ALA ALA A . n A 1 119 GLN 119 140 140 GLN GLN A . n A 1 120 LYS 120 141 141 LYS LYS A . n A 1 121 THR 121 142 142 THR THR A . n A 1 122 PRO 122 143 143 PRO PRO A . n A 1 123 ALA 123 144 144 ALA ALA A . n A 1 124 THR 124 145 145 THR THR A . n A 1 125 THR 125 146 146 THR THR A . n A 1 126 ALA 126 147 147 ALA ALA A . n A 1 127 ASP 127 148 148 ASP ASP A . n A 1 128 GLY 128 149 149 GLY GLY A . n A 1 129 ILE 129 150 150 ILE ILE A . n A 1 130 ILE 130 151 151 ILE ILE A . n A 1 131 ALA 131 152 152 ALA ALA A . n A 1 132 ILE 132 153 153 ILE ILE A . n A 1 133 ALA 133 154 154 ALA ALA A . n A 1 134 GLN 134 155 155 GLN GLN A . n A 1 135 ALA 135 156 156 ALA ALA A . n A 1 136 MET 136 157 157 MET MET A . n A 1 137 GLU 137 158 158 GLU GLU A . n A 1 138 ASP 138 159 159 ASP ASP A . n A 1 139 LYS 139 160 160 LYS LYS A . n A 1 140 LEU 140 161 161 LEU LEU A . n A 1 141 ASN 141 162 162 ASN ASN A . n A 1 142 ASN 142 163 163 ASN ASN A . n A 1 143 VAL 143 164 164 VAL VAL A . n A 1 144 ASN 144 165 165 ASN ASN A . n A 1 145 LYS 145 166 166 LYS LYS A . n A 1 146 LYS 146 167 167 LYS LYS A . n A 1 147 GLN 147 168 168 GLN GLN A . n A 1 148 HIS 148 169 169 HIS HIS A . n A 1 149 ASP 149 170 170 ASP ASP A . n A 1 150 ALA 150 171 171 ALA ALA A . n A 1 151 LEU 151 172 172 LEU LEU A . n A 1 152 LYS 152 173 173 LYS LYS A . n A 1 153 ASN 153 174 174 ASN ASN A . n A 1 154 LEU 154 175 175 LEU LEU A . n A 1 155 LYS 155 176 176 LYS LYS A . n A 1 156 GLU 156 177 177 GLU GLU A . n A 1 157 LYS 157 178 178 LYS LYS A . n A 1 158 ALA 158 179 179 ALA ALA A . n A 1 159 LYS 159 180 180 LYS LYS A . n A 1 160 THR 160 181 181 THR THR A . n A 1 161 ALA 161 182 182 ALA ALA A . n A 1 162 THR 162 183 183 THR THR A . n A 1 163 THR 163 184 184 THR THR A . n A 1 164 THR 164 185 185 THR THR A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-25 2 'Structure model' 1 1 2015-04-29 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id PBr-1 0.8 ? mM '[U-100% 13C; U-100% 15N]' 1 'sodium phosphate-2' 50 ? mM ? 1 'sodium chloride-3' 150 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MTD _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total ? _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 140 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 140 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 58 ? ? H A THR 62 ? ? 1.52 2 1 O A PHE 56 ? ? H A PHE 59 ? ? 1.57 3 2 HE2 A HIS 169 ? ? HZ1 A LYS 173 ? ? 1.30 4 3 O A ALA 58 ? ? H A THR 62 ? ? 1.57 5 4 O A ALA 58 ? ? H A THR 62 ? ? 1.59 6 5 O A ALA 58 ? ? H A THR 62 ? ? 1.57 7 6 O A PHE 109 ? ? H A TYR 113 ? ? 1.53 8 6 O A ALA 138 ? ? H A THR 142 ? ? 1.54 9 6 O A ALA 58 ? ? H A THR 62 ? ? 1.56 10 6 O A PHE 56 ? ? H A PHE 59 ? ? 1.60 11 7 O A PHE 109 ? ? H A TYR 113 ? ? 1.55 12 7 O A ALA 58 ? ? H A THR 62 ? ? 1.55 13 7 O A PHE 56 ? ? H A PHE 59 ? ? 1.55 14 8 O A ALA 58 ? ? H A THR 62 ? ? 1.54 15 8 O A THR 132 ? ? H A VAL 135 ? ? 1.56 16 8 O A ALA 138 ? ? H A THR 142 ? ? 1.59 17 8 O A LYS 166 ? ? H A ASP 170 ? ? 1.60 18 9 O A ALA 58 ? ? H A THR 62 ? ? 1.53 19 9 O A PHE 109 ? ? H A TYR 113 ? ? 1.53 20 9 O A THR 132 ? ? H A VAL 135 ? ? 1.60 21 10 HZ3 A LYS 94 ? ? HE21 A GLN 155 ? ? 1.25 22 10 HZ3 A LYS 46 ? ? HZ3 A LYS 50 ? ? 1.31 23 10 O A PHE 109 ? ? H A TYR 113 ? ? 1.55 24 10 O A ALA 86 ? ? H A PHE 89 ? ? 1.57 25 10 O A ALA 58 ? ? H A THR 62 ? ? 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 27 ? ? -39.78 -33.42 2 1 ALA A 35 ? ? -76.32 26.18 3 1 ASN A 43 ? ? -49.36 -16.24 4 1 VAL A 54 ? ? -46.65 151.77 5 1 PHE A 59 ? ? -38.02 -27.28 6 1 SER A 66 ? ? -53.65 -8.80 7 1 GLU A 70 ? ? 37.36 29.70 8 1 PRO A 72 ? ? -70.15 41.16 9 1 GLU A 87 ? ? -48.93 -15.94 10 1 GLN A 129 ? ? -60.66 14.92 11 1 LYS A 130 ? ? -91.90 -66.99 12 1 THR A 145 ? ? -58.98 -4.31 13 1 THR A 184 ? ? 59.00 150.57 14 2 ARG A 30 ? ? 52.19 -89.56 15 2 SER A 34 ? ? -77.14 -162.64 16 2 VAL A 54 ? ? -46.44 154.83 17 2 THR A 62 ? ? -48.93 -14.24 18 2 SER A 69 ? ? -44.51 -87.00 19 2 GLU A 70 ? ? -169.84 -61.34 20 2 LYS A 71 ? ? -168.76 55.46 21 2 PRO A 72 ? ? -72.15 44.94 22 2 LYS A 79 ? ? -56.30 -76.02 23 2 LYS A 101 ? ? -51.33 -73.68 24 2 MET A 116 ? ? -45.99 -16.30 25 2 GLU A 124 ? ? -45.83 -16.93 26 2 GLN A 129 ? ? -61.28 11.61 27 2 LYS A 130 ? ? -92.06 -66.86 28 2 ALA A 144 ? ? -68.42 21.73 29 2 THR A 184 ? ? -75.81 -158.19 30 3 GLU A 26 ? ? -49.68 -18.17 31 3 ARG A 30 ? ? -76.57 28.16 32 3 SER A 33 ? ? 56.40 -157.83 33 3 SER A 34 ? ? -146.51 -67.57 34 3 ASN A 43 ? ? -45.80 -17.50 35 3 SER A 66 ? ? -47.36 -19.78 36 3 LYS A 102 ? ? -174.85 -12.15 37 3 SER A 103 ? ? -101.33 72.80 38 3 SER A 105 ? ? 63.30 169.12 39 3 MET A 116 ? ? -42.27 -18.45 40 3 GLN A 129 ? ? -57.48 16.83 41 3 LYS A 130 ? ? -92.04 -61.43 42 3 ALA A 179 ? ? -169.72 110.14 43 4 ARG A 30 ? ? -86.47 37.31 44 4 GLU A 32 ? ? -54.77 -8.44 45 4 SER A 33 ? ? -50.88 -95.01 46 4 VAL A 54 ? ? -46.85 155.55 47 4 GLU A 70 ? ? 32.17 36.41 48 4 LYS A 101 ? ? -41.64 -76.63 49 4 GLU A 124 ? ? -39.85 -26.97 50 4 GLN A 129 ? ? -56.42 14.53 51 4 LYS A 130 ? ? -93.34 -63.07 52 4 ALA A 144 ? ? -69.25 22.64 53 4 THR A 184 ? ? 58.69 -78.88 54 5 ARG A 30 ? ? -36.01 94.75 55 5 LEU A 31 ? ? -135.00 -56.78 56 5 SER A 34 ? ? -160.42 -140.81 57 5 GLU A 70 ? ? 72.62 -29.49 58 5 LYS A 71 ? ? -156.84 63.83 59 5 LYS A 101 ? ? -30.41 -89.51 60 5 SER A 105 ? ? 64.72 155.59 61 5 MET A 116 ? ? -44.32 -19.08 62 5 GLN A 129 ? ? -54.87 14.73 63 6 GLU A 32 ? ? -69.19 35.43 64 6 THR A 62 ? ? -48.04 -17.15 65 6 GLU A 70 ? ? 51.74 14.03 66 6 LYS A 71 ? ? -165.82 56.42 67 6 PRO A 72 ? ? -75.90 21.69 68 6 LYS A 79 ? ? -58.89 -73.36 69 6 MET A 116 ? ? -42.68 -19.55 70 6 GLN A 129 ? ? -60.26 16.08 71 6 LYS A 130 ? ? -91.12 -60.43 72 6 PRO A 143 ? ? -55.30 88.80 73 6 ALA A 144 ? ? -68.03 22.01 74 7 THR A 24 ? ? -59.96 175.32 75 7 ILE A 29 ? ? -97.66 -65.30 76 7 GLU A 32 ? ? -57.77 -6.00 77 7 SER A 34 ? ? -161.41 -35.26 78 7 THR A 62 ? ? -47.16 -15.96 79 7 SER A 69 ? ? -46.23 -95.75 80 7 GLU A 70 ? ? 177.63 -47.67 81 7 LYS A 71 ? ? -177.79 68.11 82 7 PRO A 72 ? ? -70.80 22.07 83 7 LYS A 79 ? ? -56.89 -73.71 84 7 LYS A 101 ? ? -36.19 -36.09 85 7 LYS A 102 ? ? -171.78 -11.55 86 7 SER A 103 ? ? -101.95 69.14 87 7 SER A 105 ? ? 58.19 162.64 88 7 MET A 116 ? ? -45.19 -18.93 89 7 GLU A 124 ? ? -46.95 -19.94 90 7 GLN A 129 ? ? -58.71 15.85 91 7 LYS A 130 ? ? -92.26 -62.88 92 7 ALA A 144 ? ? -79.37 22.02 93 7 LYS A 180 ? ? -83.15 -111.04 94 8 SER A 33 ? ? -150.13 78.43 95 8 SER A 69 ? ? -50.21 109.41 96 8 LYS A 79 ? ? -56.51 -75.07 97 8 LYS A 101 ? ? -49.52 -83.35 98 8 MET A 116 ? ? -44.87 -17.08 99 8 GLU A 124 ? ? -48.76 -12.18 100 8 GLN A 129 ? ? -55.30 13.32 101 8 ALA A 144 ? ? -69.97 21.14 102 8 ALA A 179 ? ? 59.54 137.90 103 8 LYS A 180 ? ? -69.67 -158.44 104 8 ALA A 182 ? ? -66.32 2.04 105 8 THR A 184 ? ? 57.99 154.44 106 9 ARG A 30 ? ? 63.15 -23.08 107 9 SER A 34 ? ? -140.96 -61.32 108 9 ASN A 43 ? ? -49.33 -17.54 109 9 VAL A 54 ? ? -48.60 156.67 110 9 SER A 66 ? ? -48.83 -9.97 111 9 GLU A 70 ? ? 38.60 32.95 112 9 LYS A 71 ? ? -152.16 44.59 113 9 PRO A 72 ? ? -67.04 60.88 114 9 LYS A 79 ? ? -59.39 -74.54 115 9 LYS A 101 ? ? -42.34 86.80 116 9 LYS A 102 ? ? 58.49 -9.07 117 9 SER A 103 ? ? -100.74 52.11 118 9 SER A 105 ? ? 54.26 171.33 119 9 MET A 116 ? ? -45.28 -19.37 120 9 GLN A 129 ? ? -60.24 16.07 121 9 LYS A 130 ? ? -92.55 -61.32 122 9 THR A 181 ? ? 55.25 15.24 123 10 LEU A 31 ? ? -136.85 -61.49 124 10 SER A 34 ? ? 176.09 -85.88 125 10 VAL A 54 ? ? -45.82 155.82 126 10 LYS A 71 ? ? -176.95 58.84 127 10 PRO A 72 ? ? -78.33 24.37 128 10 LYS A 101 ? ? -33.60 83.01 129 10 LYS A 102 ? ? 52.61 0.84 130 10 SER A 105 ? ? 52.88 -156.59 131 10 MET A 116 ? ? -45.67 -16.70 132 10 GLU A 124 ? ? -49.16 -12.06 133 10 GLN A 129 ? ? -54.80 14.60 134 10 THR A 181 ? ? -106.10 47.11 #