HEADER HYDROLASE 18-SEP-14 2MUX TITLE SUMO2 NON-COVALENTLY INTERACTS WITH USP25 AND DOWNREGULATES ITS TITLE 2 ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-146; COMPND 5 SYNONYM: DEUBIQUITINATING ENZYME 25, USP ON CHROMOSOME 21, UBIQUITIN COMPND 6 THIOESTERASE 25, UBIQUITIN-SPECIFIC-PROCESSING PROTEASE 25; COMPND 7 EC: 3.4.19.12; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP25, USP21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS HYDROLASE EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR L.SHI,N.ZHANG,Y.WEN REVDAT 2 14-JUN-23 2MUX 1 REMARK SEQADV REVDAT 1 20-APR-16 2MUX 0 JRNL AUTH L.SHI,Y.WEN,N.ZHANG JRNL TITL SUMO2 NON-COVALENTLY INTERACTS WITH USP25 AND DOWNREGULATES JRNL TITL 2 ITS ACTIVITY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MUX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000104075. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-99% 13C; U-99% 15N] REMARK 210 USP25, 90 % H2O, 10 % D2O, 90% REMARK 210 H2O/10% D2O; 0.8 MM [U-99% 15N] REMARK 210 USP25, 90 % H2O, 10 % D2O, 90% REMARK 210 H2O/10% D2O; 0.8 MM [U-99% 13C] REMARK 210 USP25, 100 % D2O, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 HN(CO)CA; 3D HCACO; 3D HCCH- REMARK 210 TOCSY; 3D HCCH-COSY; 3D 1H-15N REMARK 210 NOESY; 3D HBHA(CO)NH; 3D 1H-13C REMARK 210 NOESY ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 23 H GLU A 26 1.50 REMARK 500 O GLU A 134 H ILE A 137 1.54 REMARK 500 O ARG A 118 H THR A 120 1.55 REMARK 500 O LEU A 133 H ALA A 138 1.57 REMARK 500 OG1 THR A 120 H GLY A 121 1.58 REMARK 500 O GLU A 134 N ILE A 137 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 2 56.49 -98.31 REMARK 500 1 GLU A 4 40.64 -78.16 REMARK 500 1 ASN A 6 -65.53 166.32 REMARK 500 1 VAL A 7 103.11 -173.76 REMARK 500 1 GLN A 10 -143.53 47.65 REMARK 500 1 ALA A 56 20.54 35.12 REMARK 500 1 LYS A 57 -100.42 -137.19 REMARK 500 1 ASN A 58 -164.16 -108.73 REMARK 500 1 ALA A 59 138.23 156.61 REMARK 500 1 LYS A 60 -123.64 -121.31 REMARK 500 1 THR A 61 -37.33 -162.13 REMARK 500 1 GLN A 63 -84.46 -57.91 REMARK 500 1 GLU A 66 93.85 -37.14 REMARK 500 1 TYR A 69 70.18 -157.25 REMARK 500 1 TYR A 70 -85.38 -148.12 REMARK 500 1 GLN A 71 35.02 -96.46 REMARK 500 1 THR A 72 17.67 44.23 REMARK 500 1 ALA A 73 15.42 42.26 REMARK 500 1 LEU A 74 93.75 -28.35 REMARK 500 1 ASN A 77 -88.09 -100.21 REMARK 500 1 ASP A 78 157.60 152.99 REMARK 500 1 ILE A 81 -84.67 -22.51 REMARK 500 1 SER A 82 -170.14 -170.78 REMARK 500 1 SER A 85 70.20 67.48 REMARK 500 1 ASP A 88 30.50 -95.60 REMARK 500 1 ASN A 90 26.93 -171.25 REMARK 500 1 VAL A 91 -116.60 -99.89 REMARK 500 1 ILE A 92 -161.54 31.33 REMARK 500 1 ASP A 97 79.89 37.85 REMARK 500 1 LEU A 110 -19.02 -48.61 REMARK 500 1 GLU A 112 -18.17 -47.77 REMARK 500 1 ASN A 114 3.46 -62.19 REMARK 500 1 GLU A 119 -32.99 64.23 REMARK 500 1 THR A 120 -109.34 -70.57 REMARK 500 1 ALA A 128 -84.37 -72.91 REMARK 500 1 ILE A 129 -39.92 -26.90 REMARK 500 1 ILE A 137 40.00 102.53 REMARK 500 1 ALA A 138 -91.84 15.77 REMARK 500 1 GLU A 139 -144.07 -67.88 REMARK 500 1 LYS A 141 -83.00 -87.70 REMARK 500 1 CYS A 143 154.66 -46.38 REMARK 500 1 LEU A 144 -159.74 -92.59 REMARK 500 2 THR A 2 80.38 -56.99 REMARK 500 2 VAL A 3 -107.43 -42.31 REMARK 500 2 GLU A 4 -77.97 -93.49 REMARK 500 2 GLN A 5 -79.40 47.79 REMARK 500 2 ASN A 6 -174.58 88.88 REMARK 500 2 GLN A 9 -179.78 -50.81 REMARK 500 2 GLN A 10 -129.52 -123.55 REMARK 500 2 SER A 11 -97.91 -125.82 REMARK 500 REMARK 500 THIS ENTRY HAS 598 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19111 RELATED DB: BMRB DBREF 2MUX A 1 146 UNP Q9UHP3 UBP25_HUMAN 1 146 SEQADV 2MUX MET A -19 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX GLY A -18 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX SER A -17 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX SER A -16 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -15 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -14 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -13 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -12 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -11 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A -10 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX SER A -9 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX SER A -8 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX GLY A -7 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX LEU A -6 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX VAL A -5 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX PRO A -4 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX ARG A -3 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX GLY A -2 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX SER A -1 UNP Q9UHP3 EXPRESSION TAG SEQADV 2MUX HIS A 0 UNP Q9UHP3 EXPRESSION TAG SEQRES 1 A 166 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 166 LEU VAL PRO ARG GLY SER HIS MET THR VAL GLU GLN ASN SEQRES 3 A 166 VAL LEU GLN GLN SER ALA ALA GLN LYS HIS GLN GLN THR SEQRES 4 A 166 PHE LEU ASN GLN LEU ARG GLU ILE THR GLY ILE ASN ASP SEQRES 5 A 166 THR GLN ILE LEU GLN GLN ALA LEU LYS ASP SER ASN GLY SEQRES 6 A 166 ASN LEU GLU LEU ALA VAL ALA PHE LEU THR ALA LYS ASN SEQRES 7 A 166 ALA LYS THR PRO GLN GLN GLU GLU THR THR TYR TYR GLN SEQRES 8 A 166 THR ALA LEU PRO GLY ASN ASP ARG TYR ILE SER VAL GLY SEQRES 9 A 166 SER GLN ALA ASP THR ASN VAL ILE ASP LEU THR GLY ASP SEQRES 10 A 166 ASP LYS ASP ASP LEU GLN ARG ALA ILE ALA LEU SER LEU SEQRES 11 A 166 ALA GLU SER ASN ARG ALA PHE ARG GLU THR GLY ILE THR SEQRES 12 A 166 ASP GLU GLU GLN ALA ILE SER ARG VAL LEU GLU ALA SER SEQRES 13 A 166 ILE ALA GLU ASN LYS ALA CYS LEU LYS ARG HELIX 1 1 SER A 11 THR A 28 1 18 HELIX 2 2 ASP A 32 ASN A 44 1 13 HELIX 3 3 ASN A 46 ALA A 56 1 11 HELIX 4 4 LYS A 99 PHE A 117 1 19 HELIX 5 5 ASP A 124 ILE A 137 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1