data_2MV3 # _entry.id 2MV3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MV3 pdb_00002mv3 10.2210/pdb2mv3/pdb RCSB RCSB104081 ? ? BMRB 25241 ? ? WWPDB D_1000104081 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 25241 BMRB unspecified . 2MUY PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MV3 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-09-22 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Scharfenberg, F.' 1 'Serek-Heuberger, J.' 2 'Martin, J.' 3 'Lupas, A.N.' 4 'Coles, M.' 5 # _citation.id primary _citation.title 'Structure and Evolution of N-domains in AAA Metalloproteases.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 427 _citation.page_first 910 _citation.page_last 923 _citation.year 2015 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25576874 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2014.12.024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Scharfenberg, F.' 1 ? primary 'Serek-Heuberger, J.' 2 ? primary 'Coles, M.' 3 ? primary 'Hartmann, M.D.' 4 ? primary 'Habeck, M.' 5 ? primary 'Martin, J.' 6 ? primary 'Lupas, A.N.' 7 ? primary 'Alva, V.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Mitochondrial inner membrane i-AAA protease supercomplex subunit YME1' _entity.formula_weight 10056.246 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'N-domain (UNP residues 97-176)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein OSD1, Tat-binding homolog 11, Yeast mitochondrial escape protein 1, Yme1-N' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVAVSHAMLATREQEANKDLTSPDAQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEADAVRQN LEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MVAVSHAMLATREQEANKDLTSPDAQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEADAVRQN LEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 ALA n 1 4 VAL n 1 5 SER n 1 6 HIS n 1 7 ALA n 1 8 MET n 1 9 LEU n 1 10 ALA n 1 11 THR n 1 12 ARG n 1 13 GLU n 1 14 GLN n 1 15 GLU n 1 16 ALA n 1 17 ASN n 1 18 LYS n 1 19 ASP n 1 20 LEU n 1 21 THR n 1 22 SER n 1 23 PRO n 1 24 ASP n 1 25 ALA n 1 26 GLN n 1 27 ALA n 1 28 ALA n 1 29 PHE n 1 30 TYR n 1 31 LYS n 1 32 LEU n 1 33 LEU n 1 34 LEU n 1 35 GLN n 1 36 SER n 1 37 ASN n 1 38 TYR n 1 39 PRO n 1 40 GLN n 1 41 TYR n 1 42 VAL n 1 43 VAL n 1 44 SER n 1 45 ARG n 1 46 PHE n 1 47 GLU n 1 48 THR n 1 49 PRO n 1 50 GLY n 1 51 ILE n 1 52 ALA n 1 53 SER n 1 54 SER n 1 55 PRO n 1 56 GLU n 1 57 CYS n 1 58 MET n 1 59 GLU n 1 60 LEU n 1 61 TYR n 1 62 MET n 1 63 GLU n 1 64 ALA n 1 65 LEU n 1 66 GLN n 1 67 ARG n 1 68 ILE n 1 69 GLY n 1 70 ARG n 1 71 HIS n 1 72 SER n 1 73 GLU n 1 74 ALA n 1 75 ASP n 1 76 ALA n 1 77 VAL n 1 78 ARG n 1 79 GLN n 1 80 ASN n 1 81 LEU n 1 82 GLU n 1 83 HIS n 1 84 HIS n 1 85 HIS n 1 86 HIS n 1 87 HIS n 1 88 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YME1, OSD1, YTA11, YPR024W, YP9367.04' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae S288c' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'C41(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YME1_YEAST _struct_ref.pdbx_db_accession P32795 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VAVSHAMLATREQEANKDLTSPDAQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEADAVRQNL ; _struct_ref.pdbx_align_begin 97 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MV3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 81 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32795 _struct_ref_seq.db_align_beg 97 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 176 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 97 _struct_ref_seq.pdbx_auth_seq_align_end 176 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MV3 MET A 1 ? UNP P32795 ? ? 'initiating methionine' 96 1 1 2MV3 GLU A 82 ? UNP P32795 ? ? 'expression tag' 177 2 1 2MV3 HIS A 83 ? UNP P32795 ? ? 'expression tag' 178 3 1 2MV3 HIS A 84 ? UNP P32795 ? ? 'expression tag' 179 4 1 2MV3 HIS A 85 ? UNP P32795 ? ? 'expression tag' 180 5 1 2MV3 HIS A 86 ? UNP P32795 ? ? 'expression tag' 181 6 1 2MV3 HIS A 87 ? UNP P32795 ? ? 'expression tag' 182 7 1 2MV3 HIS A 88 ? UNP P32795 ? ? 'expression tag' 183 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '3D HNCO' 1 2 2 '3D C(CO)NH' 1 3 2 '3D HCCH-TOCSY' 1 4 2 '3D CCH NOESY' 1 5 2 '3D CNH NOESY' 1 6 1 '3D 1H-15N NOESY' 1 7 2 '3D 1H-13C NOESY' 1 8 1 '3D HNHA' 1 9 1 '3D HNHB' 1 10 2 '3D 3JHBHA(CO)NH' 1 11 1 '3D NNH NOESY' 1 12 2 '3D HN(CA)NNH' 1 13 2 '3D HNCA' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.340 _pdbx_nmr_exptl_sample_conditions.pH 7.9 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.5 mM [U-100% 15N] Yme1-N, 20 mM Tris, 300 mM sodium chloride, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.5 mM [U-100% 13C; U-100% 15N] Yme1-N, 20 mM Tris, 300 mM sodium chloride, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MV3 _pdbx_nmr_refine.method 'simulated annealing, NOESY back-calculation' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 23 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MV3 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0.02 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 0.3 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.08 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MV3 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin ? 1 'Bruker Biospin' processing TopSpin ? 2 Goddard 'chemical shift assignment' Sparky ? 3 Goddard 'data analysis' Sparky ? 4 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' 2.9.4 5 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 2.9.4 6 'In house' refinement NMR-SPIRIT 1.1 7 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MV3 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MV3 _struct.title 'The N-domain of the AAA metalloproteinase Yme1 from Saccharomyces cerevisiae' _struct.pdbx_model_details 'minimized average structure, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2MV3 _struct_keywords.pdbx_keywords 'NUCLEOTIDE BINDING PROTEIN' _struct_keywords.text 'AAA ATPase, substrate recognition domain, metalloprotease, NUCLEOTIDE BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 6 ? ASP A 19 ? HIS A 101 ASP A 114 1 ? 14 HELX_P HELX_P2 2 SER A 22 ? SER A 36 ? SER A 117 SER A 131 1 ? 15 HELX_P HELX_P3 3 TYR A 38 ? GLU A 47 ? TYR A 133 GLU A 142 1 ? 10 HELX_P HELX_P4 4 SER A 54 ? ILE A 68 ? SER A 149 ILE A 163 1 ? 15 HELX_P HELX_P5 5 ARG A 70 ? HIS A 83 ? ARG A 165 HIS A 178 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2MV3 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 96 96 MET MET A . n A 1 2 VAL 2 97 97 VAL VAL A . n A 1 3 ALA 3 98 98 ALA ALA A . n A 1 4 VAL 4 99 99 VAL VAL A . n A 1 5 SER 5 100 100 SER SER A . n A 1 6 HIS 6 101 101 HIS HIS A . n A 1 7 ALA 7 102 102 ALA ALA A . n A 1 8 MET 8 103 103 MET MET A . n A 1 9 LEU 9 104 104 LEU LEU A . n A 1 10 ALA 10 105 105 ALA ALA A . n A 1 11 THR 11 106 106 THR THR A . n A 1 12 ARG 12 107 107 ARG ARG A . n A 1 13 GLU 13 108 108 GLU GLU A . n A 1 14 GLN 14 109 109 GLN GLN A . n A 1 15 GLU 15 110 110 GLU GLU A . n A 1 16 ALA 16 111 111 ALA ALA A . n A 1 17 ASN 17 112 112 ASN ASN A . n A 1 18 LYS 18 113 113 LYS LYS A . n A 1 19 ASP 19 114 114 ASP ASP A . n A 1 20 LEU 20 115 115 LEU LEU A . n A 1 21 THR 21 116 116 THR THR A . n A 1 22 SER 22 117 117 SER SER A . n A 1 23 PRO 23 118 118 PRO PRO A . n A 1 24 ASP 24 119 119 ASP ASP A . n A 1 25 ALA 25 120 120 ALA ALA A . n A 1 26 GLN 26 121 121 GLN GLN A . n A 1 27 ALA 27 122 122 ALA ALA A . n A 1 28 ALA 28 123 123 ALA ALA A . n A 1 29 PHE 29 124 124 PHE PHE A . n A 1 30 TYR 30 125 125 TYR TYR A . n A 1 31 LYS 31 126 126 LYS LYS A . n A 1 32 LEU 32 127 127 LEU LEU A . n A 1 33 LEU 33 128 128 LEU LEU A . n A 1 34 LEU 34 129 129 LEU LEU A . n A 1 35 GLN 35 130 130 GLN GLN A . n A 1 36 SER 36 131 131 SER SER A . n A 1 37 ASN 37 132 132 ASN ASN A . n A 1 38 TYR 38 133 133 TYR TYR A . n A 1 39 PRO 39 134 134 PRO PRO A . n A 1 40 GLN 40 135 135 GLN GLN A . n A 1 41 TYR 41 136 136 TYR TYR A . n A 1 42 VAL 42 137 137 VAL VAL A . n A 1 43 VAL 43 138 138 VAL VAL A . n A 1 44 SER 44 139 139 SER SER A . n A 1 45 ARG 45 140 140 ARG ARG A . n A 1 46 PHE 46 141 141 PHE PHE A . n A 1 47 GLU 47 142 142 GLU GLU A . n A 1 48 THR 48 143 143 THR THR A . n A 1 49 PRO 49 144 144 PRO PRO A . n A 1 50 GLY 50 145 145 GLY GLY A . n A 1 51 ILE 51 146 146 ILE ILE A . n A 1 52 ALA 52 147 147 ALA ALA A . n A 1 53 SER 53 148 148 SER SER A . n A 1 54 SER 54 149 149 SER SER A . n A 1 55 PRO 55 150 150 PRO PRO A . n A 1 56 GLU 56 151 151 GLU GLU A . n A 1 57 CYS 57 152 152 CYS CYS A . n A 1 58 MET 58 153 153 MET MET A . n A 1 59 GLU 59 154 154 GLU GLU A . n A 1 60 LEU 60 155 155 LEU LEU A . n A 1 61 TYR 61 156 156 TYR TYR A . n A 1 62 MET 62 157 157 MET MET A . n A 1 63 GLU 63 158 158 GLU GLU A . n A 1 64 ALA 64 159 159 ALA ALA A . n A 1 65 LEU 65 160 160 LEU LEU A . n A 1 66 GLN 66 161 161 GLN GLN A . n A 1 67 ARG 67 162 162 ARG ARG A . n A 1 68 ILE 68 163 163 ILE ILE A . n A 1 69 GLY 69 164 164 GLY GLY A . n A 1 70 ARG 70 165 165 ARG ARG A . n A 1 71 HIS 71 166 166 HIS HIS A . n A 1 72 SER 72 167 167 SER SER A . n A 1 73 GLU 73 168 168 GLU GLU A . n A 1 74 ALA 74 169 169 ALA ALA A . n A 1 75 ASP 75 170 170 ASP ASP A . n A 1 76 ALA 76 171 171 ALA ALA A . n A 1 77 VAL 77 172 172 VAL VAL A . n A 1 78 ARG 78 173 173 ARG ARG A . n A 1 79 GLN 79 174 174 GLN GLN A . n A 1 80 ASN 80 175 175 ASN ASN A . n A 1 81 LEU 81 176 176 LEU LEU A . n A 1 82 GLU 82 177 177 GLU GLU A . n A 1 83 HIS 83 178 178 HIS HIS A . n A 1 84 HIS 84 179 179 HIS HIS A . n A 1 85 HIS 85 180 180 HIS HIS A . n A 1 86 HIS 86 181 181 HIS HIS A . n A 1 87 HIS 87 182 182 HIS HIS A . n A 1 88 HIS 88 183 183 HIS HIS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-28 2 'Structure model' 1 1 2015-02-25 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 7 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.013 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.001 _pdbx_nmr_ensemble_rms.entry_id 2MV3 _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Yme1-N-1 0.5 ? mM '[U-100% 15N]' 1 Tris-2 20 ? mM ? 1 'sodium chloride-3' 300 ? mM ? 1 Yme1-N-4 0.5 ? mM '[U-100% 13C; U-100% 15N]' 2 Tris-5 20 ? mM ? 2 'sodium chloride-6' 300 ? mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MV3 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total ? _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 47 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 34 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 85 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 94 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 180 ? ? -150.10 -68.15 2 6 GLU A 177 ? ? -146.53 -56.98 3 6 HIS A 180 ? ? -150.01 -69.27 4 8 LEU A 176 ? ? -64.79 88.03 5 14 HIS A 181 ? ? -149.82 -66.17 6 19 GLU A 177 ? ? -146.18 -71.81 7 19 HIS A 178 ? ? -150.08 -65.56 8 20 HIS A 181 ? ? -96.84 -68.56 9 23 LEU A 176 ? ? -89.33 39.91 #