HEADER IMMUNE SYSTEM 25-SEP-14 2MV8 TITLE SOLUTION STRUCTURE OF OVIS ARIES PRP WITH MUTATION DELTA190-197 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR PRION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 103-234; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 3 ORGANISM_COMMON: DOMESTIC SHEEP,LAMBS,WILD SHEEP; SOURCE 4 ORGANISM_TAXID: 9940; SOURCE 5 VARIANT: VRQ; SOURCE 6 GENE: PRNP PRION PROTEIN, PRP; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS PRION, SCRAPIE, MAJOR PRION PROTEIN, CELLULAR FORM, TRANSMISSIBLE KEYWDS 2 SPONGIFORM ENCEPHALOPATHY, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.MUNOZ,A.EGALON,V.BERINGUE,H.REZAEI,M.DRON,C.SIZUN REVDAT 6 09-OCT-24 2MV8 1 REMARK REVDAT 5 27-DEC-23 2MV8 1 REMARK SEQADV LINK REVDAT 4 17-AUG-16 2MV8 1 JRNL REVDAT 3 08-JUN-16 2MV8 1 JRNL REVDAT 2 25-MAY-16 2MV8 1 JRNL REVDAT 1 07-OCT-15 2MV8 0 JRNL AUTH C.MUNOZ-MONTESINO,C.SIZUN,M.MOUDJOU,L.HERZOG,F.REINE, JRNL AUTH 2 J.CHAPUIS,D.CIRIC,A.IGEL-EGALON,H.LAUDE,V.BERINGUE,H.REZAEI, JRNL AUTH 3 M.DRON JRNL TITL GENERATING BONA FIDE MAMMALIAN PRIONS WITH INTERNAL JRNL TITL 2 DELETIONS. JRNL REF J.VIROL. V. 90 6963 2016 JRNL REFN ISSN 0022-538X JRNL PMID 27226369 JRNL DOI 10.1128/JVI.00555-16 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0, CYANA REMARK 3 AUTHORS : PETER GUNTERT (CYANA), PETER GUNTERT (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MV8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000104086. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.00 REMARK 210 PH : 5.30 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1.00 ATM REMARK 210 SAMPLE CONTENTS : 0.35 MM [U-99% 13C; U-99% 15N] REMARK 210 PRPDELTA190, 10.00 MM SODIUM REMARK 210 ACETATE, 90% H2O/10% D2O; 0.45 REMARK 210 MM [U-99% 15N] PRPDELTA190, REMARK 210 10.00 MM SODIUM ACETATE, 90% H2O/ REMARK 210 10% D2O; 0.35 MM [U-99% 13C; U- REMARK 210 99% 15N] PRPDELTA190, 10.00 MM REMARK 210 SODIUM ACETATE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D CBCA(CO)NH; REMARK 210 3D 1H-15N NOESY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC; 3D HCCH-TOCSY; REMARK 210 3D AROMATIC HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 950 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS 2.2, TALOS+ 1.0, REMARK 210 TOPSPIN 3.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 81 REMARK 465 GLY A 82 REMARK 465 SER A 83 REMARK 465 SER A 84 REMARK 465 HIS A 85 REMARK 465 HIS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 HIS A 89 REMARK 465 HIS A 90 REMARK 465 SER A 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 107 71.23 -160.82 REMARK 500 1 HIS A 114 144.42 -173.03 REMARK 500 1 SER A 173 138.86 179.47 REMARK 500 1 GLU A 199 -74.02 -138.25 REMARK 500 1 GLN A 230 -62.94 -102.22 REMARK 500 2 ASN A 103 106.94 -160.32 REMARK 500 2 LYS A 107 75.10 -169.26 REMARK 500 2 LEU A 128 -62.68 -98.98 REMARK 500 2 ASP A 170 39.75 -92.99 REMARK 500 2 GLN A 171 -57.52 -126.55 REMARK 500 2 GLU A 199 -74.71 -144.87 REMARK 500 3 LEU A 94 88.01 49.06 REMARK 500 3 LYS A 107 75.42 49.85 REMARK 500 3 MET A 112 53.97 -97.24 REMARK 500 3 LEU A 128 -64.20 -92.58 REMARK 500 3 ASP A 170 41.00 -87.59 REMARK 500 3 TYR A 172 99.14 -57.40 REMARK 500 3 SER A 173 135.82 177.67 REMARK 500 3 GLU A 199 -74.78 -148.39 REMARK 500 4 SER A 99 105.14 -162.64 REMARK 500 4 HIS A 100 55.44 -102.05 REMARK 500 4 ASN A 103 118.40 -169.82 REMARK 500 4 ASN A 111 108.44 -161.63 REMARK 500 4 LEU A 128 -73.93 -70.50 REMARK 500 4 TYR A 172 99.65 -56.82 REMARK 500 4 SER A 173 145.20 179.18 REMARK 500 4 GLU A 199 -71.59 -156.17 REMARK 500 5 SER A 99 124.06 -170.80 REMARK 500 5 ALA A 120 125.93 -172.01 REMARK 500 5 LEU A 128 -66.47 -90.04 REMARK 500 5 TYR A 172 102.52 -52.61 REMARK 500 5 SER A 173 143.54 179.24 REMARK 500 5 GLU A 199 -74.31 -137.69 REMARK 500 5 GLN A 230 -69.99 -106.04 REMARK 500 6 VAL A 95 78.12 -112.66 REMARK 500 6 ASN A 103 144.31 -170.84 REMARK 500 6 ASN A 111 -74.46 -72.14 REMARK 500 6 VAL A 125 107.76 -51.69 REMARK 500 6 ASP A 170 41.25 -85.79 REMARK 500 6 TYR A 172 99.29 -57.27 REMARK 500 6 SER A 173 133.91 178.06 REMARK 500 6 GLU A 199 -75.03 -132.78 REMARK 500 7 MET A 112 51.22 38.28 REMARK 500 7 LYS A 113 43.93 -108.13 REMARK 500 7 HIS A 114 42.18 39.10 REMARK 500 7 ALA A 121 -178.76 -170.26 REMARK 500 7 LEU A 128 -51.96 -121.59 REMARK 500 7 VAL A 136 104.33 -59.06 REMARK 500 7 TYR A 172 101.49 -54.80 REMARK 500 7 GLU A 199 -75.59 -145.85 REMARK 500 REMARK 500 THIS ENTRY HAS 165 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25250 RELATED DB: BMRB DBREF 2MV8 A 103 234 UNP Q712V9 Q712V9_SHEEP 103 234 SEQADV 2MV8 MET A 81 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 GLY A 82 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 83 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 84 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 85 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 86 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 87 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 88 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 89 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 90 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 91 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 92 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 GLY A 93 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 LEU A 94 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 VAL A 95 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 PRO A 96 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 ARG A 97 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 GLY A 98 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 99 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 HIS A 100 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 MET A 101 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 SER A 102 UNP Q712V9 EXPRESSION TAG SEQADV 2MV8 A UNP Q712V9 HIS 190 DELETION SEQADV 2MV8 A UNP Q712V9 THR 191 DELETION SEQADV 2MV8 A UNP Q712V9 VAL 192 DELETION SEQADV 2MV8 A UNP Q712V9 THR 193 DELETION SEQADV 2MV8 A UNP Q712V9 THR 194 DELETION SEQADV 2MV8 A UNP Q712V9 THR 195 DELETION SEQADV 2MV8 A UNP Q712V9 THR 196 DELETION SEQADV 2MV8 A UNP Q712V9 LYS 197 DELETION SEQRES 1 A 146 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 146 LEU VAL PRO ARG GLY SER HIS MET SER ASN LYS PRO SER SEQRES 3 A 146 LYS PRO LYS THR ASN MET LYS HIS VAL ALA GLY ALA ALA SEQRES 4 A 146 ALA ALA GLY ALA VAL VAL GLY GLY LEU GLY GLY TYR MET SEQRES 5 A 146 LEU GLY SER VAL MET SER ARG PRO LEU ILE HIS PHE GLY SEQRES 6 A 146 ASN ASP TYR GLU ASP ARG TYR TYR ARG GLU ASN MET TYR SEQRES 7 A 146 ARG TYR PRO ASN GLN VAL TYR TYR ARG PRO VAL ASP GLN SEQRES 8 A 146 TYR SER ASN GLN ASN ASN PHE VAL HIS ASP CYS VAL ASN SEQRES 9 A 146 ILE THR VAL LYS GLN GLY GLU ASN PHE THR GLU THR ASP SEQRES 10 A 146 ILE LYS ILE MET GLU ARG VAL VAL GLU GLN MET CYS ILE SEQRES 11 A 146 THR GLN TYR GLN ARG GLU SER GLN ALA TYR TYR GLN ARG SEQRES 12 A 146 GLY ALA SER HELIX 1 1 ASN A 146 ASN A 156 1 11 HELIX 2 2 ASN A 174 VAL A 187 1 14 HELIX 3 3 THR A 204 TYR A 229 1 26 SSBOND 1 CYS A 182 CYS A 217 1555 1555 1.98 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1