HEADER UNKNOWN FUNCTION 01-OCT-14 2MVB TITLE NMR STRUCTURE OF THE PROTEIN NP_344732.1 FROM STREPTOCOCCUS PNEUMONIAE TITLE 2 TIGR4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 GENE: SP_0191; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: SPEEDET KEYWDS HUMAN GUT MICROBIOME SECRETED PROTEIN, UNKNOWN FUNCTION, STRUCTURAL KEYWDS 2 GENOMICS, PSI-BIOLOGY, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.K.DUTTA,P.SERRANO,M.GERALT,K.WUTHRICH,JOINT CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (JCSG) REVDAT 3 14-JUN-23 2MVB 1 REMARK REVDAT 2 11-FEB-15 2MVB 1 JRNL TITLE REVDAT 1 05-NOV-14 2MVB 0 JRNL AUTH S.K.DUTTA,P.SERRANO,M.GERALT,K.WUTHRICH JRNL TITL NMR STRUCTURE OF THE PROTEIN NP_344732.1 FROM STREPTOCOCCUS JRNL TITL 2 PNEUMONIAE TIGR4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0, OPAL, CNS REMARK 3 AUTHORS : HERRMANN, GUNTERT AND WUTHRICH (CYANA), LUGINBUHL, REMARK 3 GUNTERT, BILLETER AND WUTHRICH (OPAL), BRUNGER REMARK 3 ADAMS CLORE GROS NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MVB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000104089. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.0798 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-99% 13C; U-98% 15N] REMARK 210 PROTEIN, 20 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 5 MM REMARK 210 SODIUM AZIDE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : APSY 4D-HACANH; APSY 5D REMARK 210 -HACACONH; APSY 5D-CBCACONH; 2D REMARK 210 1H-15N HSQC; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC; 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.0, TOPSPIN 3.1 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 7 -164.93 -116.07 REMARK 500 1 PRO A 34 -169.76 -67.70 REMARK 500 1 SER A 36 -154.89 -78.15 REMARK 500 1 ASP A 38 115.47 -167.14 REMARK 500 1 THR A 43 -163.96 -113.77 REMARK 500 1 LYS A 49 3.24 -152.81 REMARK 500 1 ASP A 50 -85.65 -151.38 REMARK 500 1 LYS A 51 16.55 -142.82 REMARK 500 1 GLN A 59 175.25 -56.65 REMARK 500 1 VAL A 64 -168.97 -74.12 REMARK 500 1 HIS A 75 -81.16 -89.52 REMARK 500 1 ASP A 122 75.77 -116.16 REMARK 500 1 PHE A 123 -8.50 -52.83 REMARK 500 1 LEU A 134 58.68 -96.18 REMARK 500 1 GLU A 135 -76.41 51.16 REMARK 500 1 LEU A 137 50.54 -91.26 REMARK 500 2 ASP A 37 -64.06 69.17 REMARK 500 2 ASP A 38 98.82 178.85 REMARK 500 2 LYS A 49 -5.20 -152.01 REMARK 500 2 ASP A 50 -87.54 -149.37 REMARK 500 2 LYS A 51 19.72 -155.92 REMARK 500 2 HIS A 75 -81.10 -94.15 REMARK 500 2 LEU A 146 49.45 -79.14 REMARK 500 2 ASN A 160 4.09 -67.41 REMARK 500 3 ASN A 20 130.60 -176.27 REMARK 500 3 GLU A 22 26.56 -64.88 REMARK 500 3 ASN A 24 79.46 -61.13 REMARK 500 3 SER A 36 -157.24 -71.97 REMARK 500 3 ASP A 38 -19.84 -146.40 REMARK 500 3 LYS A 49 -3.97 -146.56 REMARK 500 3 ASP A 50 -87.24 -140.17 REMARK 500 3 LYS A 51 36.91 -147.65 REMARK 500 3 SER A 65 14.06 -175.63 REMARK 500 3 ASP A 66 -72.36 -146.50 REMARK 500 3 HIS A 75 -80.15 -129.04 REMARK 500 3 ALA A 112 0.30 -67.98 REMARK 500 3 LEU A 146 10.28 -66.45 REMARK 500 4 THR A 10 52.14 -163.96 REMARK 500 4 LYS A 23 92.32 -65.23 REMARK 500 4 ASP A 37 -68.81 70.79 REMARK 500 4 LYS A 49 5.64 -152.39 REMARK 500 4 ASP A 50 -86.31 -156.04 REMARK 500 4 LYS A 51 13.26 -156.34 REMARK 500 4 VAL A 64 -166.37 -76.65 REMARK 500 4 HIS A 75 -78.16 -109.70 REMARK 500 4 ASN A 160 46.04 -94.37 REMARK 500 5 THR A 6 89.35 -155.80 REMARK 500 5 ALA A 14 -154.96 -79.84 REMARK 500 5 GLU A 22 70.04 -64.72 REMARK 500 5 ASN A 24 44.13 -81.94 REMARK 500 REMARK 500 THIS ENTRY HAS 218 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 1 PRO A 2 2 148.48 REMARK 500 GLU A 164 GLN A 165 2 149.43 REMARK 500 LEU A 68 LYS A 69 4 149.98 REMARK 500 GLY A 1 PRO A 2 14 146.50 REMARK 500 GLY A 1 PRO A 2 15 142.41 REMARK 500 GLY A 1 PRO A 2 16 148.87 REMARK 500 ASP A 9 THR A 10 17 141.09 REMARK 500 GLY A 1 PRO A 2 19 142.08 REMARK 500 ALA A 21 GLU A 22 19 148.62 REMARK 500 ASP A 38 GLY A 39 20 145.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 TYR A 48 0.07 SIDE CHAIN REMARK 500 5 TYR A 48 0.07 SIDE CHAIN REMARK 500 6 ARG A 62 0.08 SIDE CHAIN REMARK 500 9 TYR A 71 0.09 SIDE CHAIN REMARK 500 13 TYR A 48 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25259 RELATED DB: BMRB REMARK 900 RELATED ID: JCSG-417539 RELATED DB: TARGETTRACK DBREF 2MVB A 1 165 UNP Q97SX2 Q97SX2_STRPN 25 189 SEQRES 1 A 165 GLY PRO ALA THR LYS THR GLU LYS ASP THR LEU GLN SER SEQRES 2 A 165 ALA LEU PRO VAL ILE GLU ASN ALA GLU LYS ASN THR VAL SEQRES 3 A 165 VAL THR LYS THR LEU VAL LEU PRO LYS SER ASP ASP GLY SEQRES 4 A 165 SER GLN GLN THR GLN THR ILE THR TYR LYS ASP LYS THR SEQRES 5 A 165 PHE LEU SER LEU ALA ILE GLN GLN LYS ARG PRO VAL SER SEQRES 6 A 165 ASP GLU LEU LYS THR TYR ILE ASP GLN HIS GLY VAL GLU SEQRES 7 A 165 GLU THR GLN LYS ALA LEU LEU GLU ALA GLU GLU LYS ASP SEQRES 8 A 165 LYS SER ILE ILE GLU ALA ARG LYS LEU ALA GLY PHE LYS SEQRES 9 A 165 LEU GLU THR LYS LEU LEU SER ALA THR GLU LEU GLN THR SEQRES 10 A 165 THR THR SER PHE ASP PHE GLN VAL LEU ASP VAL LYS LYS SEQRES 11 A 165 ALA SER GLN LEU GLU HIS LEU LYS ASN ILE GLY LEU GLU SEQRES 12 A 165 ASN LEU LEU LYS ASN GLU PRO SER LYS TYR ILE SER ASP SEQRES 13 A 165 ARG LEU ALA ASN GLY ALA THR GLU GLN HELIX 1 1 SER A 65 HIS A 75 1 11 HELIX 2 2 GLY A 76 LYS A 90 1 15 HELIX 3 3 ASP A 91 LYS A 99 1 9 HELIX 4 4 ASP A 127 SER A 132 1 6 HELIX 5 5 LEU A 134 ASN A 139 5 6 HELIX 6 6 GLY A 141 LYS A 147 1 7 HELIX 7 7 SER A 151 ALA A 159 1 9 SHEET 1 A 5 VAL A 27 LEU A 31 0 SHEET 2 A 5 GLN A 44 TYR A 48 -1 O ILE A 46 N LYS A 29 SHEET 3 A 5 PHE A 53 PRO A 63 -1 O ALA A 57 N THR A 45 SHEET 4 A 5 GLU A 114 PHE A 121 -1 O PHE A 121 N LEU A 56 SHEET 5 A 5 PHE A 103 SER A 111 -1 N LYS A 104 O SER A 120 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1