HEADER PLANT PROTEIN 19-NOV-14 2MWQ TITLE SOLUTION STRUCTURE OF PSBQ FROM SPINACIA OLERACEA COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXYGEN-EVOLVING ENHANCER PROTEIN 3, CHLOROPLASTIC; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OEE3, 16 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF COMPND 5 PHOTOSYSTEM II, OEC 16 KDA SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; SOURCE 3 ORGANISM_COMMON: SPINACH; SOURCE 4 ORGANISM_TAXID: 3562; SOURCE 5 GENE: PSBQ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: JR2592 KEYWDS PSII PSBQ PROTEIN, PHOTOSYNTHESIS, PHOTOSYSTEM II, OXYGEN EVOLVING KEYWDS 2 COMPLEX, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.RATHNER,N.MUELLER,R.WIMMER,K.CHANDRA REVDAT 3 14-JUN-23 2MWQ 1 REMARK REVDAT 2 02-SEP-15 2MWQ 1 JRNL REVDAT 1 29-JUL-15 2MWQ 0 JRNL AUTH P.RATHNER,A.RATHNER,M.HORNICAKOVA,C.WOHLSCHLAGER,K.CHANDRA, JRNL AUTH 2 J.KOHOUTOVA,R.ETTRICH,R.WIMMER,N.MULLER JRNL TITL SOLUTION NMR AND MOLECULAR DYNAMICS REVEAL A PERSISTENT JRNL TITL 2 ALPHA HELIX WITHIN THE DYNAMIC REGION OF PSBQ FROM JRNL TITL 3 PHOTOSYSTEM II OF HIGHER PLANTS. JRNL REF PROTEINS V. 83 1677 2015 JRNL REFN ISSN 0887-3585 JRNL PMID 26138376 JRNL DOI 10.1002/PROT.24853 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 3.1, YASARA 12.1.19 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), YASARA BIOSCIENCES REMARK 3 (YASARA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MWQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000104139. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.15 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.06 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-13C; U-15N] PSBQ, 20 REMARK 210 MM SODIUM PHOSPHATE, 50 UM REMARK 210 SODIUM AZIDE, 1 MM EDTA, 10 V/V REMARK 210 [U-100% 2H] D2O, 90% H2O/10% D2O; REMARK 210 0.8 MM [U-13C; U-15N] PSBQ, 20 REMARK 210 MM SODIUM PHOSPHATE, 50 UM REMARK 210 SODIUM AZIDE, 1 MM EDTA, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D CBCA(CO)NH; 3D HCCH- REMARK 210 TOCSY; 3D (H)C(C)(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-COSY; 3D REMARK 210 TOCSY-HSQC; 2D (HB)CB(CGCD)HD; REMARK 210 2D (HB)CB(CGCDCE)HE; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVIII REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.1, CARA 1.5.5, TALOS, REMARK 210 CYANA 3.0, YASARA 12.1.19 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 6 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 7 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 9 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 11 ARG A 79 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 12 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 14 ARG A 79 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 15 ARG A 79 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 17 ARG A 79 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 17 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 20 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 13 153.94 73.05 REMARK 500 1 ASP A 28 -51.80 -145.52 REMARK 500 1 LYS A 35 -100.69 43.21 REMARK 500 2 ALA A 2 55.18 38.23 REMARK 500 2 LEU A 13 13.91 58.60 REMARK 500 2 ASP A 24 -49.95 -167.20 REMARK 500 2 ASP A 28 170.48 61.88 REMARK 500 2 LEU A 31 128.01 66.63 REMARK 500 2 ASP A 36 -43.46 -136.90 REMARK 500 2 LYS A 98 -141.50 -115.77 REMARK 500 3 ASN A 22 -163.00 58.30 REMARK 500 3 GLN A 25 -39.60 -141.49 REMARK 500 3 ALA A 26 -150.48 55.02 REMARK 500 3 ASP A 28 -159.40 54.21 REMARK 500 3 ASP A 36 -13.65 63.85 REMARK 500 3 PRO A 97 47.84 -74.74 REMARK 500 3 LYS A 98 -120.85 -132.93 REMARK 500 4 ARG A 3 71.08 54.68 REMARK 500 4 ASN A 22 -51.77 69.36 REMARK 500 4 SER A 23 -143.70 48.41 REMARK 500 4 GLN A 25 43.36 -83.50 REMARK 500 4 THR A 34 176.42 65.77 REMARK 500 4 LYS A 35 -50.64 -142.96 REMARK 500 4 ARG A 68 -106.18 -123.04 REMARK 500 4 LYS A 69 22.59 -149.47 REMARK 500 4 ALA A 70 39.78 -83.82 REMARK 500 5 LEU A 13 -72.30 -105.37 REMARK 500 5 ASP A 28 -136.22 55.60 REMARK 500 5 LYS A 35 74.13 41.89 REMARK 500 6 ASP A 24 -132.02 -93.34 REMARK 500 6 THR A 34 93.54 -53.72 REMARK 500 6 ASP A 36 -31.56 69.45 REMARK 500 6 ASN A 76 -61.15 -93.39 REMARK 500 7 PRO A 4 43.40 -74.50 REMARK 500 7 VAL A 6 -50.33 -143.02 REMARK 500 7 SER A 14 157.44 72.11 REMARK 500 7 SER A 23 99.99 -69.02 REMARK 500 7 LYS A 35 -81.79 -157.25 REMARK 500 7 LEU A 43 74.44 -115.51 REMARK 500 7 ASN A 76 -61.32 -95.01 REMARK 500 8 LEU A 17 140.70 70.29 REMARK 500 8 GLU A 21 -10.90 47.95 REMARK 500 8 SER A 23 34.70 -142.94 REMARK 500 8 ASP A 36 -23.33 69.28 REMARK 500 8 PRO A 97 32.25 -78.64 REMARK 500 8 LYS A 98 -111.28 -118.32 REMARK 500 9 PRO A 4 37.14 -74.45 REMARK 500 9 LEU A 13 -24.01 72.82 REMARK 500 9 LEU A 17 55.52 -143.63 REMARK 500 9 ASP A 28 160.97 72.37 REMARK 500 REMARK 500 THIS ENTRY HAS 121 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17357 RELATED DB: BMRB REMARK 900 RELATED ID: 1VYK RELATED DB: PDB REMARK 900 X-RAY STRUCTURE REMARK 900 RELATED ID: 25350 RELATED DB: BMRB DBREF 2MWQ A 1 149 UNP P12301 PSBQ_SPIOL 84 232 SEQRES 1 A 149 GLU ALA ARG PRO ILE VAL VAL GLY PRO PRO PRO PRO LEU SEQRES 2 A 149 SER GLY GLY LEU PRO GLY THR GLU ASN SER ASP GLN ALA SEQRES 3 A 149 ARG ASP GLY THR LEU PRO TYR THR LYS ASP ARG PHE TYR SEQRES 4 A 149 LEU GLN PRO LEU PRO PRO THR GLU ALA ALA GLN ARG ALA SEQRES 5 A 149 LYS VAL SER ALA SER GLU ILE LEU ASN VAL LYS GLN PHE SEQRES 6 A 149 ILE ASP ARG LYS ALA TRP PRO SER LEU GLN ASN ASP LEU SEQRES 7 A 149 ARG LEU ARG ALA SER TYR LEU ARG TYR ASP LEU LYS THR SEQRES 8 A 149 VAL ILE SER ALA LYS PRO LYS ASP GLU LYS LYS SER LEU SEQRES 9 A 149 GLN GLU LEU THR SER LYS LEU PHE SER SER ILE ASP ASN SEQRES 10 A 149 LEU ASP HIS ALA ALA LYS ILE LYS SER PRO THR GLU ALA SEQRES 11 A 149 GLU LYS TYR TYR GLY GLN THR VAL SER ASN ILE ASN GLU SEQRES 12 A 149 VAL LEU ALA LYS LEU GLY HELIX 1 1 ASP A 36 GLN A 41 1 6 HELIX 2 2 GLU A 47 ASN A 61 1 15 HELIX 3 3 VAL A 62 LYS A 69 1 8 HELIX 4 4 ALA A 70 ILE A 93 1 24 HELIX 5 5 SER A 94 LYS A 96 5 3 HELIX 6 6 PRO A 97 ILE A 124 1 28 HELIX 7 7 SER A 126 LYS A 147 1 22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1