HEADER ISOMERASE 13-MAR-15 2N0T TITLE STRUCTURAL ENSEMBLE OF THE ENZYME CYCLOPHILIN REVEALS AN ORCHESTRATED TITLE 2 MODE OF ACTION AT ATOMIC RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE A, CYCLOPHILIN A, CYCLOSPORIN A-BINDING PROTEIN, COMPND 5 ROTAMASE A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A, N-TERMINALLY COMPND 6 PROCESSED; COMPND 7 EC: 5.2.1.8; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPIA, CYPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PRSET A KEYWDS ISOMERASE EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR C.N.CHI,B.VOEGELI,S.BIBOW,D.STROTZ,J.ORTS,P.GUNTERT,R.RIEK REVDAT 3 14-JUN-23 2N0T 1 REMARK REVDAT 2 14-OCT-15 2N0T 1 JRNL REVDAT 1 26-AUG-15 2N0T 0 JRNL AUTH C.N.CHI,B.VOGELI,S.BIBOW,D.STROTZ,J.ORTS,P.GUNTERT,R.RIEK JRNL TITL A STRUCTURAL ENSEMBLE FOR THE ENZYME CYCLOPHILIN REVEALS AN JRNL TITL 2 ORCHESTRATED MODE OF ACTION AT ATOMIC RESOLUTION. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 54 11657 2015 JRNL REFN ISSN 1433-7851 JRNL PMID 26265096 JRNL DOI 10.1002/ANIE.201503698 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N0T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000104278. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 26 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.8 MM [U-100% 15N] SODIUM REMARK 210 PHOSPHATE, 97% H2O/3% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 2 157.51 62.55 REMARK 500 1 LEU A 17 -72.03 -121.97 REMARK 500 1 LEU A 24 126.99 69.51 REMARK 500 1 PRO A 30 58.87 -69.77 REMARK 500 1 LYS A 31 -72.49 -168.59 REMARK 500 1 LYS A 49 93.91 46.67 REMARK 500 1 SER A 51 -168.43 -111.52 REMARK 500 1 PRO A 58 98.43 -69.76 REMARK 500 1 PHE A 60 -60.65 -120.27 REMARK 500 1 MET A 61 -160.44 -173.45 REMARK 500 1 CYS A 62 -73.00 -133.36 REMARK 500 1 GLN A 63 160.93 61.80 REMARK 500 1 PHE A 67 47.26 -154.77 REMARK 500 1 ASN A 71 -78.67 -32.41 REMARK 500 1 LYS A 76 -79.64 -174.89 REMARK 500 1 GLU A 81 -74.85 -116.82 REMARK 500 1 SER A 99 -116.86 -143.75 REMARK 500 1 MET A 100 143.37 178.24 REMARK 500 1 ASN A 106 64.87 26.53 REMARK 500 1 THR A 107 54.39 -163.22 REMARK 500 1 ILE A 114 -63.73 -102.24 REMARK 500 1 CYS A 115 112.15 79.37 REMARK 500 1 PHE A 129 112.99 -178.65 REMARK 500 1 LYS A 131 -174.94 172.87 REMARK 500 1 LYS A 133 -74.52 -47.50 REMARK 500 1 ASN A 149 -33.86 178.71 REMARK 500 1 LYS A 154 -169.35 -119.70 REMARK 500 1 ALA A 159 -64.98 -101.57 REMARK 500 2 VAL A 2 155.65 64.78 REMARK 500 2 LYS A 28 -77.19 -52.19 REMARK 500 2 PRO A 30 -87.14 -69.74 REMARK 500 2 LYS A 49 -69.99 -123.48 REMARK 500 2 CYS A 52 -168.34 -114.17 REMARK 500 2 HIS A 54 -74.71 -102.96 REMARK 500 2 MET A 61 -162.90 -166.00 REMARK 500 2 THR A 68 35.25 -177.79 REMARK 500 2 ASN A 71 -55.34 173.12 REMARK 500 2 LYS A 76 -177.71 -174.96 REMARK 500 2 GLU A 81 -77.50 -98.78 REMARK 500 2 ASN A 87 167.26 179.53 REMARK 500 2 SER A 99 -133.74 -149.79 REMARK 500 2 ASN A 102 -75.39 -107.36 REMARK 500 2 ALA A 103 -84.62 -134.99 REMARK 500 2 ASN A 106 46.59 34.47 REMARK 500 2 THR A 107 46.74 -142.26 REMARK 500 2 GLN A 111 64.31 72.30 REMARK 500 2 LYS A 118 135.67 64.69 REMARK 500 2 ASP A 123 -82.17 -60.49 REMARK 500 2 LYS A 125 61.31 78.41 REMARK 500 2 HIS A 126 -48.21 -163.14 REMARK 500 REMARK 500 THIS ENTRY HAS 1287 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25502 RELATED DB: BMRB REMARK 900 RELATED ID: 2MZU RELATED DB: PDB DBREF 2N0T A 1 165 UNP P62937 PPIA_HUMAN 1 165 SEQRES 1 A 165 MET VAL ASN PRO THR VAL PHE PHE ASP ILE ALA VAL ASP SEQRES 2 A 165 GLY GLU PRO LEU GLY ARG VAL SER PHE GLU LEU PHE ALA SEQRES 3 A 165 ASP LYS VAL PRO LYS THR ALA GLU ASN PHE ARG ALA LEU SEQRES 4 A 165 SER THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER CYS SEQRES 5 A 165 PHE HIS ARG ILE ILE PRO GLY PHE MET CYS GLN GLY GLY SEQRES 6 A 165 ASP PHE THR ARG HIS ASN GLY THR GLY GLY LYS SER ILE SEQRES 7 A 165 TYR GLY GLU LYS PHE GLU ASP GLU ASN PHE ILE LEU LYS SEQRES 8 A 165 HIS THR GLY PRO GLY ILE LEU SER MET ALA ASN ALA GLY SEQRES 9 A 165 PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR ALA SEQRES 10 A 165 LYS THR GLU TRP LEU ASP GLY LYS HIS VAL VAL PHE GLY SEQRES 11 A 165 LYS VAL LYS GLU GLY MET ASN ILE VAL GLU ALA MET GLU SEQRES 12 A 165 ARG PHE GLY SER ARG ASN GLY LYS THR SER LYS LYS ILE SEQRES 13 A 165 THR ILE ALA ASP CYS GLY GLN LEU GLU HELIX 1 1 LYS A 31 ARG A 37 1 7 HELIX 2 2 GLY A 135 MET A 142 1 8 SHEET 1 A 2 VAL A 6 VAL A 12 0 SHEET 2 A 2 GLU A 15 PHE A 22 -1 O VAL A 20 N PHE A 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1