HEADER TRANSFERASE 24-MAR-15 2N19 TITLE STIL BINDING TO THE POLO-BOX DOMAIN 3 OF PLK4 REGULATES CENTRIOLE TITLE 2 DUPLICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PLK4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 884-970; COMPND 5 SYNONYM: POLO-LIKE KINASE 4, PLK-4, SERINE/THREONINE-PROTEIN KINASE COMPND 6 18, SERINE/THREONINE-PROTEIN KINASE SAK; COMPND 7 EC: 2.7.11.21; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLK4, SAK, STK18; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PETG-30A KEYWDS TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.BOEHM,C.ARQUINT,A.GABRYJONCZYK,S.IMSENG,E.SAUER,S.HILLER,E.NIGG, AUTHOR 2 T.MAIER REVDAT 5 14-JUN-23 2N19 1 REMARK SEQADV REVDAT 4 28-DEC-16 2N19 1 JRNL REVDAT 3 25-MAY-16 2N19 1 JRNL REVDAT 2 11-MAY-16 2N19 1 JRNL REVDAT 1 12-AUG-15 2N19 0 JRNL AUTH C.ARQUINT,A.M.GABRYJONCZYK,S.IMSENG,R.BOHM,E.SAUER,S.HILLER, JRNL AUTH 2 E.A.NIGG,T.MAIER JRNL TITL STIL BINDING TO POLO-BOX 3 OF PLK4 REGULATES CENTRIOLE JRNL TITL 2 DUPLICATION. JRNL REF ELIFE V. 4 2015 JRNL REFN ESSN 2050-084X JRNL PMID 26188084 JRNL DOI 10.7554/ELIFE.07888 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CNS, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000104294. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293.15 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.03 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6-1.2 M [U-13C; U-15N; U-2H] REMARK 210 PLK4-PB3, 20 MM MOPS, 30 MM SODIUM CHLORIDE, 2 MM TCEP, 95% H2O/ REMARK 210 5% D2O; 0.6-1.2 M [U-2H,15N,METHYL13C/REST-12C-ILV]-PB3 PLK4-PB3, REMARK 210 20 MM MOPS, 30 MM SODIUM CHLORIDE, 2 MM TCEP, 95% H2O/5% D2O; REMARK 210 1200 MM [U-2H,15N,13C,METHYL13C/1H-ILV]-PB3 PLK4-PB3, 20 MM MOPS, REMARK 210 30 MM SODIUM CHLORIDE, 2 MM TCEP, 95% H2O/5% D2O; 600 MM [U-2H, REMARK 210 U-15N] PLK4-PB3, 20 MM MOPS, 30 MM SODIUM CHLORIDE, 2 MM TCEP, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCACB; 3D HNCACO; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D (H)C(CC)-TOCSY-(CO) REMARK 210 -15N-HSQC; 3D H(C)(CC)-TOCSY-(CO) REMARK 210 -15N-HSQC; 15N-FILTERED BPP-LED REMARK 210 NMR; 15N-{1H}-HETERONUCLEAR NOE; REMARK 210 2D 1H-13C HSQC ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 HIS A 970 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 894 5.13 55.01 REMARK 500 1 PRO A 965 100.18 -43.64 REMARK 500 2 LEU A 888 45.55 -83.78 REMARK 500 2 LYS A 894 9.35 51.64 REMARK 500 2 GLN A 934 160.79 169.53 REMARK 500 2 PRO A 967 90.90 -67.86 REMARK 500 3 LYS A 894 7.62 54.16 REMARK 500 3 GLN A 934 169.06 179.74 REMARK 500 3 ASP A 946 -64.46 -163.36 REMARK 500 3 ASN A 964 106.46 65.07 REMARK 500 3 PRO A 967 108.07 -47.55 REMARK 500 4 LEU A 888 -154.91 -124.07 REMARK 500 4 LYS A 894 8.29 57.91 REMARK 500 4 PRO A 967 48.88 -73.65 REMARK 500 5 LYS A 894 4.28 57.36 REMARK 500 5 ASP A 946 -74.97 -152.62 REMARK 500 5 PRO A 965 104.23 -34.30 REMARK 500 6 LYS A 889 40.82 -87.66 REMARK 500 6 SER A 925 125.79 -173.51 REMARK 500 6 THR A 966 81.00 49.79 REMARK 500 6 PHE A 969 -0.65 71.32 REMARK 500 7 LYS A 894 9.68 55.00 REMARK 500 7 ASN A 964 91.00 63.18 REMARK 500 8 LYS A 889 74.17 61.29 REMARK 500 8 LYS A 894 3.87 54.12 REMARK 500 8 ASN A 964 149.88 72.98 REMARK 500 9 ALA A 885 81.40 61.73 REMARK 500 9 GLN A 886 -64.47 -100.44 REMARK 500 9 LYS A 894 3.71 56.98 REMARK 500 9 ASN A 964 170.67 69.53 REMARK 500 9 PRO A 965 96.20 -54.77 REMARK 500 10 LYS A 894 -1.62 58.62 REMARK 500 10 PRO A 931 156.68 -49.74 REMARK 500 10 ASN A 964 119.36 69.95 REMARK 500 10 PHE A 969 -53.85 70.15 REMARK 500 11 SER A 884 -70.55 -75.78 REMARK 500 11 LYS A 894 7.52 59.18 REMARK 500 11 PRO A 931 -7.72 -55.84 REMARK 500 11 PRO A 945 -70.04 -63.60 REMARK 500 11 ASP A 946 -77.69 -155.29 REMARK 500 12 LYS A 894 -1.44 61.68 REMARK 500 12 VAL A 923 2.23 58.20 REMARK 500 12 ASP A 946 -70.84 -163.94 REMARK 500 12 ASN A 964 148.00 73.76 REMARK 500 13 LYS A 894 4.63 58.09 REMARK 500 13 GLN A 934 -168.20 169.14 REMARK 500 13 ASN A 964 89.18 63.65 REMARK 500 13 PRO A 967 49.02 -80.00 REMARK 500 14 LYS A 894 11.78 52.13 REMARK 500 14 ASN A 964 77.67 62.22 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25552 RELATED DB: BMRB REMARK 900 RELATED ID: 2N15 RELATED DB: PDB DBREF 2N19 A 884 970 UNP O00444 PLK4_HUMAN 884 970 SEQADV 2N19 GLY A 883 UNP O00444 EXPRESSION TAG SEQRES 1 A 88 GLY SER ALA GLN LEU LEU LYS SER VAL PHE VAL LYS ASN SEQRES 2 A 88 VAL GLY TRP ALA THR GLN LEU THR SER GLY ALA VAL TRP SEQRES 3 A 88 VAL GLN PHE ASN ASP GLY SER GLN LEU VAL VAL GLN ALA SEQRES 4 A 88 GLY VAL SER SER ILE SER TYR THR SER PRO ASN GLY GLN SEQRES 5 A 88 THR THR ARG TYR GLY GLU ASN GLU LYS LEU PRO ASP TYR SEQRES 6 A 88 ILE LYS GLN LYS LEU GLN CYS LEU SER SER ILE LEU LEU SEQRES 7 A 88 MET PHE SER ASN PRO THR PRO ASN PHE HIS HELIX 1 1 PRO A 945 LEU A 955 1 11 HELIX 2 2 LEU A 955 PHE A 962 1 8 SHEET 1 A 6 SER A 890 VAL A 893 0 SHEET 2 A 6 GLY A 897 GLN A 901 -1 O ALA A 899 N VAL A 891 SHEET 3 A 6 ALA A 906 PHE A 911 -1 O GLN A 910 N TRP A 898 SHEET 4 A 6 GLN A 916 GLN A 920 -1 O VAL A 919 N VAL A 907 SHEET 5 A 6 ILE A 926 SER A 930 -1 O THR A 929 N GLN A 916 SHEET 6 A 6 GLN A 934 TYR A 938 -1 O THR A 936 N TYR A 928 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1