data_2N39 # _entry.id 2N39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104366 RCSB ? ? 2N39 PDB pdb_00002n39 10.2210/pdb2n39/pdb 25638 BMRB ? ? D_1000104366 WWPDB ? ? # _pdbx_database_related.db_id 25638 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2N39 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2015-05-26 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mohanty, B.' 1 'Silva, A.P.G.' 2 'Mackay, J.P.' 3 'Ryan, D.P.' 4 # _citation.id primary _citation.title 'The Chromatin Remodelling Protein CHD1 Contains a Previously Unrecognised C-Terminal Helical Domain.' _citation.journal_abbrev 'J. Mol. Biol.' _citation.journal_volume 428 _citation.page_first 4298 _citation.page_last 4314 _citation.year 2016 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 1089-8638 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27591891 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2016.08.028 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mohanty, B.' 1 ? primary 'Helder, S.' 2 ? primary 'Silva, A.P.' 3 ? primary 'Mackay, J.P.' 4 ? primary 'Ryan, D.P.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Chromodomain-helicase-DNA-binding protein 1' _entity.formula_weight 12904.958 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-terminal domain (UNP residues 1409-1511)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CHD-1, ATP-dependent helicase CHD1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSLDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVS KFTEFDARKLHKLYKHAIKKRQESQQNS ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSLDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVS KFTEFDARKLHKLYKHAIKKRQESQQNS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 ASP n 1 8 GLN n 1 9 LYS n 1 10 THR n 1 11 PHE n 1 12 SER n 1 13 ILE n 1 14 CYS n 1 15 LYS n 1 16 GLU n 1 17 ARG n 1 18 MET n 1 19 ARG n 1 20 PRO n 1 21 VAL n 1 22 LYS n 1 23 ALA n 1 24 ALA n 1 25 LEU n 1 26 LYS n 1 27 GLN n 1 28 LEU n 1 29 ASP n 1 30 ARG n 1 31 PRO n 1 32 GLU n 1 33 LYS n 1 34 GLY n 1 35 LEU n 1 36 SER n 1 37 GLU n 1 38 ARG n 1 39 GLU n 1 40 GLN n 1 41 LEU n 1 42 GLU n 1 43 HIS n 1 44 THR n 1 45 ARG n 1 46 GLN n 1 47 CYS n 1 48 LEU n 1 49 ILE n 1 50 LYS n 1 51 ILE n 1 52 GLY n 1 53 ASP n 1 54 HIS n 1 55 ILE n 1 56 THR n 1 57 GLU n 1 58 CYS n 1 59 LEU n 1 60 LYS n 1 61 GLU n 1 62 TYR n 1 63 THR n 1 64 ASN n 1 65 PRO n 1 66 GLU n 1 67 GLN n 1 68 ILE n 1 69 LYS n 1 70 GLN n 1 71 TRP n 1 72 ARG n 1 73 LYS n 1 74 ASN n 1 75 LEU n 1 76 TRP n 1 77 ILE n 1 78 PHE n 1 79 VAL n 1 80 SER n 1 81 LYS n 1 82 PHE n 1 83 THR n 1 84 GLU n 1 85 PHE n 1 86 ASP n 1 87 ALA n 1 88 ARG n 1 89 LYS n 1 90 LEU n 1 91 HIS n 1 92 LYS n 1 93 LEU n 1 94 TYR n 1 95 LYS n 1 96 HIS n 1 97 ALA n 1 98 ILE n 1 99 LYS n 1 100 LYS n 1 101 ARG n 1 102 GLN n 1 103 GLU n 1 104 SER n 1 105 GLN n 1 106 GLN n 1 107 ASN n 1 108 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CHD1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CHD1_HUMAN _struct_ref.pdbx_db_accession O14646 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEF DARKLHKLYKHAIKKRQESQQNS ; _struct_ref.pdbx_align_begin 1409 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2N39 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14646 _struct_ref_seq.db_align_beg 1409 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1511 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2N39 GLY A 1 ? UNP O14646 ? ? 'expression tag' 1 1 1 2N39 PRO A 2 ? UNP O14646 ? ? 'expression tag' 2 2 1 2N39 LEU A 3 ? UNP O14646 ? ? 'expression tag' 3 3 1 2N39 GLY A 4 ? UNP O14646 ? ? 'expression tag' 4 4 1 2N39 SER A 5 ? UNP O14646 ? ? 'expression tag' 5 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 1 '2D DQF-COSY' 1 4 1 '2D 1H-1H TOCSY' 1 5 1 '2D 1H-1H NOESY' 1 6 1 '3D CBCA(CO)NH' 1 7 1 '3D HNCACB' 1 8 1 '3D HNCO' 1 9 1 '3D HN(CA)CO' 1 10 1 '3D 1H-15N NOESY' 1 11 1 '3D 1H-13C NOESY aliphatic' 1 12 1 '3D 1H-13C NOESY aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 10 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;440 uM [U-98% 13C; U-98% 15N] CHD1-C, 20 mM sodium phosphate, 10 mM NaCl, 1 mM DTT, 0.003 w/v sodium azide, 0.2 mM 2,2-dimethyl-2-silapentane-5-sulfonate (DSS), 95% H2O/5% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2N39 _pdbx_nmr_refine.method 'torsion angle dynamics, Water refinement' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2N39 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2N39 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' 'data collection' TopSpin 3.2 1 'Bruker Biospin' processing TopSpin 3.2 2 'Keller and Wuthrich' 'chemical shift assignment' CARA 1.5.3 3 'Keller and Wuthrich' 'peak picking' CARA 1.5.3 4 'Herrmann and Wuthrich' 'noe assignment' UNIO 2.0.1 5 'Herrmann and Wuthrich' 'structure solution' UNIO 2.0.1 6 'Guntert, Mumenthaler and Wuthrich' 'structure calculation' CYANA 3.0 7 'Koradi,Billeter and Guntert' 'water refinement' OPALp 1.2 8 'Guntert, Mumenthaler and Wuthrich' refinement CYANA ? 9 'Koradi,Billeter and Guntert' refinement OPALp ? 10 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2N39 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2N39 _struct.title 'NMR solution structure of a C-terminal domain of the chromodomain helicase DNA-binding protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2N39 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'chromatin remodelling, CHD1, C-terminal domain, nucleosomes, DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 7 ? MET A 18 ? ASP A 7 MET A 18 1 ? 12 HELX_P HELX_P2 2 VAL A 21 ? ARG A 30 ? VAL A 21 ARG A 30 1 ? 10 HELX_P HELX_P3 3 SER A 36 ? GLU A 61 ? SER A 36 GLU A 61 1 ? 26 HELX_P HELX_P4 4 ASN A 64 ? PHE A 82 ? ASN A 64 PHE A 82 1 ? 19 HELX_P HELX_P5 5 ASP A 86 ? GLN A 102 ? ASP A 86 GLN A 102 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2N39 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 TRP 71 71 71 TRP TRP A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 TRP 76 76 76 TRP TRP A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 SER 108 108 108 SER SER A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-01 2 'Structure model' 1 1 2017-05-10 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id CHD1-C-1 440 ? uM '[U-98% 13C; U-98% 15N]' 1 'sodium phosphate-2' 20 ? mM ? 2 NaCl-3 10 ? mM ? 3 DTT-4 1 ? mM ? 4 'sodium azide-5' 0.003 ? w/v ? 5 '2,2-dimethyl-2-silapentane-5-sulfonate (DSS)-6' 0.2 ? mM ? 6 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2N39 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1335 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 357 _pdbx_nmr_constraints.NOE_long_range_total_count 224 _pdbx_nmr_constraints.NOE_medium_range_total_count 388 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 366 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 16 NE A ARG 45 ? ? CZ A ARG 45 ? ? NH1 A ARG 45 ? ? 123.35 120.30 3.05 0.50 N 2 17 NE A ARG 101 ? ? CZ A ARG 101 ? ? NH2 A ARG 101 ? ? 117.28 120.30 -3.02 0.50 N 3 18 N A GLN 27 ? ? CA A GLN 27 ? ? CB A GLN 27 ? ? 99.68 110.60 -10.92 1.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 3 ? ? 45.19 -155.09 2 1 SER A 5 ? ? 56.00 -154.27 3 1 ARG A 19 ? ? -106.11 -69.78 4 1 SER A 104 ? ? 179.51 -47.81 5 1 GLN A 105 ? ? 54.74 -163.85 6 2 SER A 5 ? ? -162.04 88.48 7 2 MET A 18 ? ? -77.90 49.23 8 2 ASP A 29 ? ? -127.79 -54.43 9 2 GLN A 102 ? ? -153.57 80.47 10 2 GLN A 106 ? ? 47.15 -163.87 11 3 LEU A 3 ? ? 57.16 -154.70 12 3 LYS A 33 ? ? -142.85 41.25 13 3 LEU A 35 ? ? -76.25 -85.59 14 3 SER A 80 ? ? -56.65 -8.80 15 3 PHE A 82 ? ? -90.28 40.07 16 3 ASP A 86 ? ? -48.37 160.52 17 3 GLU A 103 ? ? 56.34 72.93 18 3 SER A 104 ? ? 75.23 72.77 19 3 GLN A 106 ? ? -129.24 -167.40 20 3 ASN A 107 ? ? 72.17 90.66 21 4 PRO A 2 ? ? -68.27 -177.54 22 4 SER A 5 ? ? -67.61 -178.95 23 4 MET A 18 ? ? -75.10 30.12 24 4 LYS A 33 ? ? -146.85 17.71 25 4 LEU A 35 ? ? -129.27 -86.30 26 4 THR A 63 ? ? -92.93 -70.81 27 4 ASP A 86 ? ? -47.35 155.60 28 4 GLN A 102 ? ? -152.43 70.21 29 4 SER A 104 ? ? -174.38 143.77 30 5 SER A 5 ? ? -149.70 31.82 31 5 LEU A 6 ? ? 60.79 106.25 32 5 MET A 18 ? ? -80.78 34.58 33 5 ARG A 30 ? ? -166.23 86.38 34 5 ASP A 86 ? ? -49.32 164.51 35 5 GLU A 103 ? ? -69.66 11.48 36 5 SER A 104 ? ? 76.95 88.40 37 6 SER A 5 ? ? 51.41 -175.42 38 6 MET A 18 ? ? -78.22 34.82 39 6 LYS A 33 ? ? -140.55 12.41 40 6 SER A 104 ? ? -101.92 -85.25 41 6 GLN A 105 ? ? 61.12 88.40 42 6 ASN A 107 ? ? -174.15 -45.02 43 7 LEU A 6 ? ? 62.09 171.50 44 7 MET A 18 ? ? -75.84 36.33 45 7 PRO A 31 ? ? -64.82 -169.17 46 7 PHE A 82 ? ? -82.41 31.43 47 7 ARG A 88 ? ? -53.02 -70.83 48 7 SER A 104 ? ? 52.63 100.31 49 7 GLN A 105 ? ? -60.81 97.71 50 8 SER A 5 ? ? 66.34 95.77 51 8 ARG A 19 ? ? -91.65 -60.89 52 8 ARG A 30 ? ? -159.20 86.37 53 8 LYS A 33 ? ? 58.27 12.12 54 8 LEU A 35 ? ? -63.70 -86.83 55 8 ARG A 88 ? ? -73.62 -72.11 56 8 LEU A 90 ? ? -49.92 -73.97 57 8 SER A 104 ? ? -171.13 91.43 58 8 GLN A 106 ? ? -134.79 -50.64 59 9 SER A 80 ? ? -58.53 -5.99 60 9 PHE A 82 ? ? -92.45 43.69 61 9 SER A 104 ? ? -159.18 79.77 62 9 GLN A 105 ? ? -49.82 169.45 63 10 PRO A 2 ? ? -67.30 -179.26 64 10 LEU A 3 ? ? 65.32 85.91 65 10 SER A 5 ? ? 57.74 -179.93 66 10 ASP A 7 ? ? -48.75 161.65 67 10 ARG A 19 ? ? -102.55 -61.52 68 10 LYS A 33 ? ? -143.59 19.29 69 10 LEU A 35 ? ? -69.82 -81.19 70 10 ASN A 107 ? ? 52.86 178.90 71 11 LEU A 6 ? ? 76.93 154.20 72 11 LYS A 33 ? ? 59.79 -2.30 73 11 THR A 63 ? ? -120.75 -55.11 74 11 ASP A 86 ? ? -47.80 158.25 75 11 GLN A 102 ? ? -160.59 82.90 76 11 SER A 104 ? ? -69.69 -174.38 77 11 GLN A 106 ? ? 47.34 -166.18 78 12 LEU A 6 ? ? 60.57 102.97 79 12 ASP A 7 ? ? -48.09 153.93 80 12 ASP A 29 ? ? -126.67 -77.11 81 12 ASN A 107 ? ? 59.28 -154.43 82 13 LEU A 3 ? ? -103.71 -154.62 83 13 LEU A 6 ? ? 60.77 98.72 84 13 ASP A 29 ? ? -105.11 -62.25 85 13 PRO A 31 ? ? -72.64 -166.44 86 13 LYS A 33 ? ? -141.72 18.68 87 13 LEU A 35 ? ? -112.65 -85.36 88 13 ARG A 88 ? ? -72.38 -72.05 89 13 GLN A 102 ? ? 64.88 -172.09 90 13 GLU A 103 ? ? -148.44 13.40 91 13 GLN A 106 ? ? -59.64 172.84 92 14 SER A 5 ? ? -157.08 -71.92 93 14 LYS A 33 ? ? -146.02 -3.58 94 14 GLN A 102 ? ? 45.05 164.94 95 14 ASN A 107 ? ? 49.97 -166.66 96 15 LEU A 6 ? ? 75.45 153.59 97 15 ASP A 29 ? ? -69.20 -70.73 98 15 THR A 63 ? ? 46.70 1.91 99 15 SER A 80 ? ? -66.38 13.73 100 15 GLN A 106 ? ? 57.66 -177.39 101 15 ASN A 107 ? ? 58.24 83.48 102 16 PHE A 82 ? ? -91.69 47.43 103 16 GLU A 103 ? ? 54.37 -172.05 104 16 SER A 104 ? ? -145.26 42.69 105 17 LEU A 3 ? ? -179.77 -12.05 106 17 MET A 18 ? ? -86.49 42.64 107 17 LYS A 33 ? ? -140.73 35.20 108 17 PHE A 82 ? ? -92.35 44.47 109 17 GLN A 102 ? ? 59.48 11.69 110 17 SER A 104 ? ? -149.71 -85.94 111 17 GLN A 105 ? ? 59.16 -14.46 112 18 PRO A 2 ? ? -66.35 -175.15 113 18 ARG A 88 ? ? -63.30 -71.94 114 18 ASN A 107 ? ? 54.53 -164.40 115 19 MET A 18 ? ? -78.41 33.87 116 19 ARG A 30 ? ? -152.66 85.59 117 19 LEU A 35 ? ? -88.13 -72.56 118 19 PHE A 82 ? ? -72.74 37.36 119 19 SER A 104 ? ? -127.34 -63.90 120 19 GLN A 105 ? ? 75.12 -26.97 121 19 GLN A 106 ? ? -69.88 -163.70 122 20 SER A 5 ? ? 57.87 -162.41 123 20 PHE A 82 ? ? -70.42 32.78 124 20 GLN A 105 ? ? 51.20 -169.22 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 10 LEU A 35 ? ? SER A 36 ? ? 147.09 2 14 ARG A 101 ? ? GLN A 102 ? ? -147.84 3 15 ASN A 107 ? ? SER A 108 ? ? -142.56 4 20 ASN A 107 ? ? SER A 108 ? ? 140.34 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 3 ARG A 72 ? ? 0.093 'SIDE CHAIN' 2 4 ARG A 45 ? ? 0.113 'SIDE CHAIN' 3 4 ARG A 88 ? ? 0.107 'SIDE CHAIN' 4 5 PHE A 85 ? ? 0.092 'SIDE CHAIN' 5 5 ARG A 88 ? ? 0.102 'SIDE CHAIN' 6 6 ARG A 30 ? ? 0.092 'SIDE CHAIN' 7 6 ARG A 45 ? ? 0.149 'SIDE CHAIN' 8 7 ARG A 30 ? ? 0.086 'SIDE CHAIN' 9 7 ARG A 38 ? ? 0.079 'SIDE CHAIN' 10 8 ARG A 17 ? ? 0.144 'SIDE CHAIN' 11 8 ARG A 45 ? ? 0.076 'SIDE CHAIN' 12 8 ARG A 72 ? ? 0.079 'SIDE CHAIN' 13 9 ARG A 72 ? ? 0.081 'SIDE CHAIN' 14 11 ARG A 30 ? ? 0.099 'SIDE CHAIN' 15 11 ARG A 88 ? ? 0.075 'SIDE CHAIN' 16 12 ARG A 72 ? ? 0.096 'SIDE CHAIN' 17 17 ARG A 19 ? ? 0.078 'SIDE CHAIN' 18 18 ARG A 88 ? ? 0.096 'SIDE CHAIN' #