HEADER HYDROLASE 18-JUL-15 2N5J TITLE REGNASE-1 N-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE ZC3H12A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 45-89; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ZC3H12A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX6P KEYWDS REGNASE, REGNASE-1, ZC3H12A, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.YOKOGAWA,T.TSUSHIMA,N.N.NODA,H.KUMETA,W.ADACHI,Y.ENOKIZONO, AUTHOR 2 K.YAMASHITA,D.M.STANDLEY,O.TAKEUCHI,S.AKIRA,F.INAGAKI REVDAT 2 14-JUN-23 2N5J 1 SEQADV REVDAT 1 16-MAR-16 2N5J 0 JRNL AUTH M.YOKOGAWA,T.TSUSHIMA,N.N.NODA,H.KUMETA,Y.ENOKIZONO, JRNL AUTH 2 K.YAMASHITA,D.M.STANDLEY,O.TAKEUCHI,S.AKIRA,F.INAGAKI JRNL TITL STRUCTURAL BASIS FOR THE REGULATION OF ENZYMATIC ACTIVITY OF JRNL TITL 2 REGNASE-1 BY DOMAIN-DOMAIN INTERACTIONS JRNL REF SCI REP V. 6 22324 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 26927947 JRNL DOI 10.1038/SREP22324 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.1 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000104448. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 170 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.1 MM [U-99% 13C; U-99% 15N] REMARK 210 REG1_NTD-1, 5 UG DSS-2, 10% V/V REMARK 210 [U-2H] D2O-3, 20 MM HEPES-4, 150 REMARK 210 MM SODIUM CHLORIDE-5, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-15N NOESY; 3D REMARK 210 HNCA; 3D HN(CA)HA; 3D HN(CO)CA; REMARK 210 3D HNCO; 3D C(CO)NH; 3D CBCA(CO) REMARK 210 NH; 3D HNCACB; 3D H(CCO)NH; 2D REMARK 210 1H-13C HSQC ALIPHATIC; 2D 1H-13C REMARK 210 HSQC AROMATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : AGILENT REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2008, OLIVIA, TALOS, REMARK 210 CYANA 2.1, RNMRTK V.3 REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 44 96.84 -62.90 REMARK 500 1 PHE A 54 -72.74 -63.46 REMARK 500 1 LYS A 87 -61.46 -99.35 REMARK 500 2 PRO A 42 -174.97 -69.77 REMARK 500 2 PHE A 54 -72.85 -62.80 REMARK 500 3 SER A 46 135.85 -172.39 REMARK 500 3 PHE A 54 -72.90 -62.54 REMARK 500 3 HIS A 88 57.63 -107.53 REMARK 500 4 PRO A 42 94.17 -69.80 REMARK 500 4 PHE A 54 -72.83 -64.35 REMARK 500 5 MET A 44 -174.96 -68.87 REMARK 500 5 PHE A 54 -71.36 -63.19 REMARK 500 5 HIS A 88 61.55 -109.75 REMARK 500 6 PHE A 54 -72.55 -63.10 REMARK 500 7 THR A 45 72.76 62.42 REMARK 500 7 PHE A 54 -72.91 -62.54 REMARK 500 7 LYS A 87 -62.33 -102.09 REMARK 500 8 HIS A 43 45.51 -100.03 REMARK 500 8 PHE A 54 -72.87 -62.96 REMARK 500 9 PHE A 54 -72.84 -63.24 REMARK 500 9 HIS A 88 54.27 -113.32 REMARK 500 10 HIS A 43 51.32 -98.81 REMARK 500 10 PHE A 54 -70.70 -62.17 REMARK 500 11 PHE A 54 -72.87 -62.70 REMARK 500 12 PHE A 54 -72.68 -65.07 REMARK 500 12 HIS A 88 55.74 -113.14 REMARK 500 13 HIS A 43 -63.60 -130.64 REMARK 500 13 PHE A 54 -72.85 -62.25 REMARK 500 13 HIS A 88 59.73 -110.26 REMARK 500 14 PRO A 42 98.79 -69.81 REMARK 500 15 PRO A 42 -176.88 -69.70 REMARK 500 15 PHE A 54 -72.72 -62.89 REMARK 500 16 PRO A 42 92.48 -69.67 REMARK 500 16 PHE A 54 -72.77 -64.00 REMARK 500 17 PHE A 54 -70.19 -62.27 REMARK 500 17 LYS A 87 -60.68 -92.49 REMARK 500 18 HIS A 88 58.84 -108.32 REMARK 500 19 THR A 45 76.39 54.84 REMARK 500 19 PHE A 54 -72.90 -62.75 REMARK 500 20 ALA A 76 171.00 -52.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25718 RELATED DB: BMRB REMARK 900 RELATED ID: 2N5K RELATED DB: PDB REMARK 900 RELATED ID: 2N5L RELATED DB: PDB DBREF 2N5J A 45 89 UNP Q5D1E7 ZC12A_MOUSE 45 89 SEQADV 2N5J GLY A 41 UNP Q5D1E7 EXPRESSION TAG SEQADV 2N5J PRO A 42 UNP Q5D1E7 EXPRESSION TAG SEQADV 2N5J HIS A 43 UNP Q5D1E7 EXPRESSION TAG SEQADV 2N5J MET A 44 UNP Q5D1E7 EXPRESSION TAG SEQRES 1 A 49 GLY PRO HIS MET THR SER GLU LEU GLN MET LYS VAL ASP SEQRES 2 A 49 PHE PHE ARG LYS LEU GLY TYR SER SER SER GLU ILE HIS SEQRES 3 A 49 SER VAL LEU GLN LYS LEU GLY VAL GLN ALA ASP THR ASN SEQRES 4 A 49 THR VAL LEU GLY GLU LEU VAL LYS HIS GLY HELIX 1 1 SER A 46 GLY A 59 1 14 HELIX 2 2 SER A 61 GLY A 73 1 13 HELIX 3 3 ASP A 77 GLY A 89 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1