HEADER PHOTOSYNTHESIS 29-JUL-15 2N5U TITLE SOLUTION STRUCTURE OF THE CYANOBACTERIAL CYTOCHROME B6F COMPLEX TITLE 2 SUBUNIT PETP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TSR0524 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS BP-1; SOURCE 3 ORGANISM_TAXID: 197221; SOURCE 4 STRAIN: BP-1; SOURCE 5 GENE: TSR0524; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PASK-IBA7 KEYWDS PETP, CYTOCHROME B6F COMPLEX, SH3 DOMAIN, CYANOBACTERIA, KEYWDS 2 THERMOSYNECHOCOCCUS ELONGATUS, PHOTOSYNTHESIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.VEIT,T.IKEGAMI,M.ROEGNER,R.STOLL REVDAT 4 15-MAY-24 2N5U 1 REMARK REVDAT 3 14-JUN-23 2N5U 1 REMARK SEQADV REVDAT 2 18-MAY-16 2N5U 1 JRNL REVDAT 1 13-APR-16 2N5U 0 JRNL AUTH S.VEIT,A.NAGADOI,M.ROGNER,S.REXROTH,R.STOLL,T.IKEGAMI JRNL TITL THE CYANOBACTERIAL CYTOCHROME B6F SUBUNIT PETP ADOPTS AN SH3 JRNL TITL 2 FOLD IN SOLUTION JRNL REF BIOCHIM.BIOPHYS.ACTA V.1857 705 2016 JRNL REFN ISSN 0006-3002 JRNL PMID 27033306 JRNL DOI 10.1016/J.BBABIO.2016.03.023 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, XPLOR REMARK 3 AUTHORS : GODDARD (SPARKY), SCHWIETERS, KUSZEWSKI, TJANDRA REMARK 3 AND CLORE (XPLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SEE: REMARK 3 HTTP://WWW.NMR2.BUFFALO.EDU/NESG.WIKI/STRUCTURE_REFINEMENT_USING_ REMARK 3 XPLOR-NIH REMARK 4 REMARK 4 2N5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000104459. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE-1, 10 MM REMARK 210 [U-2H] DTT-2, 0.1-0.5 MM [U-13C; REMARK 210 U-15N] PETP-3, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY ALIPHATIC; 3D 1H REMARK 210 -13C NOESY AROMATIC; 3D 1H-15N REMARK 210 NOESY; 2D 1H-15N HSQC; 2D 1H-13C REMARK 210 HSQC ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-1H NOESY; 3D REMARK 210 CBCA(CO)NH; 3D C(CO)NH; 3D HNCO; REMARK 210 3D HNCA; 3D HNCACB; 3D HBHA(CO) REMARK 210 NH; 3D HN(CO)CA; 3D H(CCO)NH; 3D REMARK 210 HCCH-TOCSY; 3D HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 950 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING, REFINEMENT REMARK 210 IN EXPLICIT WATER REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A -13 -22.39 -169.78 REMARK 500 1 SER A -12 -72.45 70.17 REMARK 500 1 TRP A -11 -2.51 -148.50 REMARK 500 1 GLU A -5 -71.13 -85.71 REMARK 500 1 ASP A 14 -99.53 -96.48 REMARK 500 1 SER A 39 13.58 -150.57 REMARK 500 2 TRP A -11 118.12 70.72 REMARK 500 2 GLN A -7 -107.82 -174.89 REMARK 500 2 LYS A -4 -40.51 75.24 REMARK 500 2 ARG A 15 95.41 -177.06 REMARK 500 3 ALA A -13 -169.83 -109.43 REMARK 500 3 GLU A -5 -128.34 -87.91 REMARK 500 3 ARG A 0 -52.82 -165.91 REMARK 500 3 ARG A 13 -152.45 -76.59 REMARK 500 3 ASP A 14 36.58 -69.28 REMARK 500 3 ARG A 15 89.52 -160.70 REMARK 500 3 SER A 39 -47.43 -155.13 REMARK 500 4 GLU A -5 -89.98 -80.94 REMARK 500 4 ASP A 14 -159.14 -130.95 REMARK 500 5 TRP A -11 119.18 58.50 REMARK 500 5 GLN A -7 86.68 64.63 REMARK 500 5 GLU A -5 -85.52 -35.82 REMARK 500 5 ASP A 37 -65.49 -99.59 REMARK 500 5 SER A 39 -57.27 72.10 REMARK 500 6 TRP A -11 -84.59 -136.73 REMARK 500 6 SER A -10 170.84 60.48 REMARK 500 6 GLU A -5 -72.65 -73.00 REMARK 500 6 ILE A -3 -51.91 -129.42 REMARK 500 6 ARG A 0 -49.15 -132.25 REMARK 500 6 ASP A 14 -165.99 -101.75 REMARK 500 6 SER A 39 178.74 68.85 REMARK 500 7 TRP A -11 -81.64 -72.77 REMARK 500 7 SER A -10 116.43 54.01 REMARK 500 7 GLN A -7 74.46 42.01 REMARK 500 7 GLU A -5 -87.87 -71.73 REMARK 500 7 ASP A 14 -49.86 -153.16 REMARK 500 7 SER A 39 -157.99 62.09 REMARK 500 8 ALA A -13 -73.95 65.47 REMARK 500 8 SER A -12 -45.03 -161.25 REMARK 500 8 SER A -10 -62.01 -143.56 REMARK 500 8 HIS A -9 91.47 -173.88 REMARK 500 8 LYS A -4 -53.90 71.40 REMARK 500 8 ASP A 14 -85.88 -94.12 REMARK 500 8 SER A 39 -147.89 63.08 REMARK 500 9 SER A -10 -86.37 52.71 REMARK 500 9 ASP A 14 -87.86 -102.16 REMARK 500 9 SER A 39 -159.49 65.25 REMARK 500 10 SER A -10 -1.51 -140.16 REMARK 500 10 GLN A -7 39.60 -84.04 REMARK 500 10 PHE A -6 39.96 -99.66 REMARK 500 REMARK 500 THIS ENTRY HAS 107 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25732 RELATED DB: BMRB DBREF 2N5U A 1 64 UNP Q8DLG9 Q8DLG9_THEEB 1 64 SEQADV 2N5U MET A -14 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U ALA A -13 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U SER A -12 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U TRP A -11 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U SER A -10 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U HIS A -9 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U PRO A -8 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U GLN A -7 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U PHE A -6 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U GLU A -5 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U LYS A -4 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U ILE A -3 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U GLU A -2 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U GLY A -1 UNP Q8DLG9 EXPRESSION TAG SEQADV 2N5U ARG A 0 UNP Q8DLG9 EXPRESSION TAG SEQRES 1 A 79 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS ILE GLU SEQRES 2 A 79 GLY ARG MET ASP VAL GLY GLN LYS VAL ARG VAL CYS ARG SEQRES 3 A 79 ILE ARG ASP ARG VAL ALA GLN ASP ILE ILE GLN LYS LEU SEQRES 4 A 79 GLY GLN VAL GLY GLN ILE THR GLY PHE LYS MET THR ASP SEQRES 5 A 79 GLY SER GLY VAL GLY VAL ILE VAL THR PHE ASP ASP ARG SEQRES 6 A 79 SER SER THR TRP PHE PHE GLU ASP GLU VAL GLU VAL VAL SEQRES 7 A 79 GLY HELIX 1 1 LYS A -4 ARG A 0 5 5 HELIX 2 2 ASP A 19 LEU A 24 1 6 SHEET 1 A 5 SER A 52 PHE A 56 0 SHEET 2 A 5 VAL A 41 PHE A 47 -1 N VAL A 43 O PHE A 55 SHEET 3 A 5 VAL A 27 MET A 35 -1 N GLN A 29 O THR A 46 SHEET 4 A 5 LYS A 6 VAL A 9 -1 N VAL A 7 O GLY A 28 SHEET 5 A 5 VAL A 60 VAL A 63 -1 O VAL A 63 N LYS A 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1