data_2N63 # _entry.id 2N63 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104468 RCSB ? ? 2N63 PDB pdb_00002n63 10.2210/pdb2n63/pdb 25749 BMRB ? ? D_1000104468 WWPDB ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-23 2 'Structure model' 2 0 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Non-polymer description' 6 2 'Structure model' 'Polymer sequence' 7 2 'Structure model' 'Source and taxonomy' 8 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' chem_comp_atom 4 2 'Structure model' chem_comp_bond 5 2 'Structure model' database_2 6 2 'Structure model' entity 7 2 'Structure model' entity_poly 8 2 'Structure model' entity_poly_seq 9 2 'Structure model' pdbx_entity_nonpoly 10 2 'Structure model' pdbx_entity_src_syn 11 2 'Structure model' pdbx_nmr_spectrometer 12 2 'Structure model' pdbx_nonpoly_scheme 13 2 'Structure model' pdbx_poly_seq_scheme 14 2 'Structure model' pdbx_struct_assembly_gen 15 2 'Structure model' struct_asym 16 2 'Structure model' struct_conf 17 2 'Structure model' struct_conn 18 2 'Structure model' struct_ref 19 2 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_atom_id' 6 2 'Structure model' '_atom_site.auth_comp_id' 7 2 'Structure model' '_atom_site.auth_seq_id' 8 2 'Structure model' '_atom_site.group_PDB' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.label_seq_id' 14 2 'Structure model' '_atom_site.pdbx_formal_charge' 15 2 'Structure model' '_atom_site.type_symbol' 16 2 'Structure model' '_chem_comp.formula' 17 2 'Structure model' '_chem_comp.formula_weight' 18 2 'Structure model' '_chem_comp.id' 19 2 'Structure model' '_chem_comp.mon_nstd_flag' 20 2 'Structure model' '_chem_comp.name' 21 2 'Structure model' '_chem_comp.pdbx_synonyms' 22 2 'Structure model' '_chem_comp.type' 23 2 'Structure model' '_database_2.pdbx_DOI' 24 2 'Structure model' '_database_2.pdbx_database_accession' 25 2 'Structure model' '_entity_poly.nstd_monomer' 26 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 27 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 28 2 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 29 2 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 30 2 'Structure model' '_pdbx_nmr_spectrometer.model' 31 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 32 2 'Structure model' '_struct_conf.beg_label_seq_id' 33 2 'Structure model' '_struct_conf.end_label_seq_id' 34 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 35 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 36 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 37 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 38 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 39 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 2 'Structure model' '_struct_ref.pdbx_align_begin' 46 2 'Structure model' '_struct_ref_seq.db_align_beg' 47 2 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 48 2 'Structure model' '_struct_ref_seq.seq_align_end' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2N63 _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2015-08-11 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 25749 BMRB unspecified . 2N65 PDB unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bhunia, A.' 1 'Datta, A.' 2 # _citation.id primary _citation.title ;Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding. ; _citation.journal_abbrev 'J Colloid Interface Sci' _citation.journal_volume 461 _citation.page_first 335 _citation.page_last 345 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0021-9797 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26407061 _citation.pdbx_database_id_DOI 10.1016/j.jcis.2015.09.036 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Datta, A.' 1 ? primary 'Kundu, P.' 2 ? primary 'Bhunia, A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'antimicrobial peptide C4VG16KRKP' 1765.157 1 ? ? ? ? 2 non-polymer syn 'PENTANOIC ACID' 102.132 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VARGWKRKCPLFGKGG _entity_poly.pdbx_seq_one_letter_code_can VARGWKRKCPLFGKGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'PENTANOIC ACID' _pdbx_entity_nonpoly.comp_id LEA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ALA n 1 3 ARG n 1 4 GLY n 1 5 TRP n 1 6 LYS n 1 7 ARG n 1 8 LYS n 1 9 CYS n 1 10 PRO n 1 11 LEU n 1 12 PHE n 1 13 GLY n 1 14 LYS n 1 15 GLY n 1 16 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEA non-polymer . 'PENTANOIC ACID' 'VALERIC ACID' 'C5 H10 O2' 102.132 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL A . n A 1 2 ALA 2 3 3 ALA ALA A . n A 1 3 ARG 3 4 4 ARG ARG A . n A 1 4 GLY 4 5 5 GLY GLY A . n A 1 5 TRP 5 6 6 TRP TRP A . n A 1 6 LYS 6 7 7 LYS LYS A . n A 1 7 ARG 7 8 8 ARG ARG A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 CYS 9 10 10 CYS CYS A . n A 1 10 PRO 10 11 11 PRO PRO A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 PHE 12 13 13 PHE PHE A . n A 1 13 GLY 13 14 14 GLY GLY A . n A 1 14 LYS 14 15 15 LYS LYS A . n A 1 15 GLY 15 16 16 GLY GLY A . n A 1 16 GLY 16 17 17 GLY GLY A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id LEA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id LEA _pdbx_nonpoly_scheme.auth_mon_id MET _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.entry_id 2N63 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2N63 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2N63 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2N63 _struct.title 'Structure of C4VG16KRKP' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2N63 _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN, ANTIMICROBIAL PROTEIN' _struct_keywords.text 'lipidated peptide, designed antimicrobial peptide, DE NOVO PROTEIN, ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2N63 _struct_ref.pdbx_db_accession 2N63 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2N63 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 16 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2N63 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id VAL _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 1 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id TRP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 5 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id VAL _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 2 _struct_conf.end_auth_comp_id TRP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 6 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id VAL _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id N _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id LEA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C2 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id VAL _struct_conn.ptnr1_auth_seq_id 2 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LEA _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.329 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 6 ? ? -120.85 -76.82 2 1 LYS A 7 ? ? -104.02 -87.06 3 1 ARG A 8 ? ? -112.48 -108.58 4 1 LYS A 9 ? ? -123.71 -67.46 5 1 LEU A 12 ? ? -114.38 -94.79 6 1 PHE A 13 ? ? -96.05 -93.28 7 1 LYS A 15 ? ? -78.53 -124.84 8 2 TRP A 6 ? ? -120.60 -71.96 9 2 LYS A 7 ? ? -106.42 -86.26 10 2 ARG A 8 ? ? -114.62 -111.92 11 2 LYS A 9 ? ? -122.24 -54.51 12 2 LEU A 12 ? ? -111.34 -92.88 13 2 PHE A 13 ? ? -97.58 -92.41 14 2 LYS A 15 ? ? -78.29 -125.20 15 3 TRP A 6 ? ? -120.44 -74.78 16 3 LYS A 7 ? ? -104.69 -86.45 17 3 ARG A 8 ? ? -111.27 -110.52 18 3 LYS A 9 ? ? -122.16 -68.63 19 3 LEU A 12 ? ? -115.58 -94.31 20 3 PHE A 13 ? ? -95.82 -98.00 21 3 LYS A 15 ? ? -81.24 -124.66 22 4 TRP A 6 ? ? -120.72 -76.28 23 4 LYS A 7 ? ? -105.27 -86.79 24 4 ARG A 8 ? ? -111.53 -110.38 25 4 LYS A 9 ? ? -122.42 -67.15 26 4 LEU A 12 ? ? -114.05 -93.86 27 4 PHE A 13 ? ? -95.67 -109.73 28 4 LYS A 15 ? ? -55.67 -93.81 29 5 TRP A 6 ? ? -121.11 -78.36 30 5 LYS A 9 ? ? -78.23 -107.92 31 5 CYS A 10 ? ? -124.13 -68.33 32 5 PRO A 11 ? ? -69.81 -175.52 33 5 LEU A 12 ? ? -113.70 -103.48 34 5 PHE A 13 ? ? -101.49 -113.78 35 5 LYS A 15 ? ? -106.32 -73.36 36 6 LYS A 9 ? ? -88.07 -112.69 37 6 CYS A 10 ? ? -123.06 -68.14 38 6 LEU A 12 ? ? -88.24 -94.84 39 6 PHE A 13 ? ? -99.12 -119.69 40 6 LYS A 15 ? ? -81.16 -70.82 41 7 ARG A 4 ? ? -49.99 -75.73 42 7 TRP A 6 ? ? -120.43 -69.24 43 7 LYS A 7 ? ? -114.09 -85.70 44 7 ARG A 8 ? ? -111.75 -111.00 45 7 LYS A 9 ? ? -121.05 -79.31 46 7 LEU A 12 ? ? -113.82 -92.54 47 7 PHE A 13 ? ? -91.28 -96.90 48 7 LYS A 15 ? ? -66.98 -121.88 49 8 TRP A 6 ? ? -120.13 -76.73 50 8 LYS A 7 ? ? -112.73 -94.28 51 8 ARG A 8 ? ? -122.20 -106.01 52 8 LYS A 9 ? ? -126.54 -63.78 53 8 LEU A 12 ? ? -121.75 -121.15 54 8 PHE A 13 ? ? -93.97 -90.40 55 8 LYS A 15 ? ? -91.26 -126.41 56 9 TRP A 6 ? ? -90.17 -60.12 57 9 LYS A 7 ? ? -120.81 -92.01 58 9 ARG A 8 ? ? -121.31 -102.19 59 9 LYS A 9 ? ? -122.72 -72.33 60 9 LEU A 12 ? ? -122.01 -83.05 61 9 PHE A 13 ? ? -101.11 -116.22 62 9 LYS A 15 ? ? -100.24 -123.72 63 10 TRP A 6 ? ? -119.62 -75.96 64 10 LYS A 7 ? ? -115.46 -92.75 65 10 ARG A 8 ? ? -121.81 -108.94 66 10 LYS A 9 ? ? -125.07 -65.75 67 10 LEU A 12 ? ? -121.43 -120.61 68 10 PHE A 13 ? ? -91.91 -112.02 69 10 LYS A 15 ? ? -115.39 -80.76 70 11 TRP A 6 ? ? -120.20 -76.19 71 11 LYS A 7 ? ? -115.95 -91.05 72 11 ARG A 8 ? ? -121.13 -111.67 73 11 LYS A 9 ? ? -124.73 -61.83 74 11 LEU A 12 ? ? -121.60 -122.67 75 11 PHE A 13 ? ? -91.11 -87.56 76 11 LYS A 15 ? ? -111.21 -121.48 77 12 TRP A 6 ? ? -120.03 -75.98 78 12 LYS A 7 ? ? -115.96 -92.60 79 12 ARG A 8 ? ? -121.66 -109.41 80 12 LYS A 9 ? ? -124.84 -65.82 81 12 LEU A 12 ? ? -121.30 -120.71 82 12 PHE A 13 ? ? -91.56 -111.78 83 12 LYS A 15 ? ? -120.00 -81.02 84 13 TRP A 6 ? ? -120.57 -77.40 85 13 LYS A 7 ? ? -108.56 -90.11 86 13 ARG A 8 ? ? -120.43 -112.71 87 13 LYS A 9 ? ? -126.14 -51.30 88 13 LEU A 12 ? ? -121.66 -121.87 89 13 PHE A 13 ? ? -89.58 -86.17 90 13 LYS A 15 ? ? -108.75 -120.78 91 14 LYS A 7 ? ? -120.76 -87.52 92 14 ARG A 8 ? ? -123.13 -104.34 93 14 LYS A 9 ? ? -122.11 -70.74 94 14 LEU A 12 ? ? -121.52 -84.10 95 14 PHE A 13 ? ? -99.90 -115.41 96 14 LYS A 15 ? ? -100.93 -123.83 97 15 TRP A 6 ? ? -120.23 -77.40 98 15 LYS A 7 ? ? -108.69 -85.27 99 15 ARG A 8 ? ? -121.21 -115.93 100 15 LYS A 9 ? ? -125.42 -51.78 101 15 LEU A 12 ? ? -121.09 -123.33 102 15 PHE A 13 ? ? -77.83 -95.09 103 15 LYS A 15 ? ? -107.91 -113.32 104 16 TRP A 6 ? ? -117.63 -79.67 105 16 LYS A 7 ? ? -117.85 -92.24 106 16 ARG A 8 ? ? -121.52 -115.24 107 16 CYS A 10 ? ? -96.76 -65.35 108 16 PRO A 11 ? ? -69.79 78.68 109 16 LEU A 12 ? ? -86.60 -101.42 110 16 PHE A 13 ? ? -95.29 -102.82 111 16 LYS A 15 ? ? -108.28 -123.38 112 17 TRP A 6 ? ? -120.05 -77.42 113 17 LYS A 7 ? ? -94.90 -91.97 114 17 ARG A 8 ? ? -123.17 -93.54 115 17 LYS A 9 ? ? -131.50 -71.39 116 17 LEU A 12 ? ? -120.08 -89.61 117 17 PHE A 13 ? ? -99.93 -117.53 118 17 LYS A 15 ? ? -120.80 -101.07 119 18 TRP A 6 ? ? -120.33 -80.26 120 18 LYS A 7 ? ? -101.66 -86.56 121 18 ARG A 8 ? ? -103.20 -114.90 122 18 LEU A 12 ? ? -112.76 -111.12 123 18 PHE A 13 ? ? -88.31 -88.47 124 18 LYS A 15 ? ? -96.27 -128.02 125 19 TRP A 6 ? ? -103.66 -77.89 126 19 LYS A 7 ? ? -111.70 -82.61 127 19 ARG A 8 ? ? -121.83 -116.59 128 19 LYS A 9 ? ? -125.91 -61.15 129 19 LEU A 12 ? ? -120.05 -126.86 130 19 PHE A 13 ? ? -82.24 -90.32 131 19 LYS A 15 ? ? -111.34 -123.28 132 20 TRP A 6 ? ? -106.75 -80.31 133 20 LYS A 7 ? ? -103.63 -87.65 134 20 ARG A 8 ? ? -103.43 -117.07 135 20 LYS A 9 ? ? -126.99 -57.82 136 20 LEU A 12 ? ? -96.26 -100.54 137 20 PHE A 13 ? ? -97.16 -109.59 138 20 LYS A 15 ? ? -120.88 -76.89 # _pdbx_entry_details.sequence_details 'A SEQUENCE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. THE FIRST RESIDUE IS C4-ACYL GROUP FOR ACETYLATION' _pdbx_entry_details.entry_id 2N63 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2N63 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2N63 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.contents '55.5 mM D2O-1, 55.5 mM H2O-2, 1 mM entity (C4VG16KRKP)-3, 0.5 mM TSP-4, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id D2O-1 55.5 ? mM ? 1 H2O-2 55.5 ? mM ? 1 'entity (C4VG16KRKP)-3' 1 ? mM ? 1 TSP-4 0.5 ? mM ? 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H TOCSY' 1 2 1 '2D 1H-1H trNOESY' # _pdbx_nmr_refine.entry_id 2N63 _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 1 2.1 'Guntert, Mumenthaler and Wuthrich' refinement CYANA 2 2.1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 CYS N N N N 41 CYS CA C N R 42 CYS C C N N 43 CYS O O N N 44 CYS CB C N N 45 CYS SG S N N 46 CYS OXT O N N 47 CYS H H N N 48 CYS H2 H N N 49 CYS HA H N N 50 CYS HB2 H N N 51 CYS HB3 H N N 52 CYS HG H N N 53 CYS HXT H N N 54 GLY N N N N 55 GLY CA C N N 56 GLY C C N N 57 GLY O O N N 58 GLY OXT O N N 59 GLY H H N N 60 GLY H2 H N N 61 GLY HA2 H N N 62 GLY HA3 H N N 63 GLY HXT H N N 64 LEA C2 C N N 65 LEA O2 O N N 66 LEA C3 C N N 67 LEA C4 C N N 68 LEA C5 C N N 69 LEA C6 C N N 70 LEA O1 O N N 71 LEA HO2 H N N 72 LEA H31 H N N 73 LEA H32 H N N 74 LEA H41 H N N 75 LEA H42 H N N 76 LEA H51 H N N 77 LEA H52 H N N 78 LEA H61 H N N 79 LEA H62 H N N 80 LEA H63 H N N 81 LEU N N N N 82 LEU CA C N S 83 LEU C C N N 84 LEU O O N N 85 LEU CB C N N 86 LEU CG C N N 87 LEU CD1 C N N 88 LEU CD2 C N N 89 LEU OXT O N N 90 LEU H H N N 91 LEU H2 H N N 92 LEU HA H N N 93 LEU HB2 H N N 94 LEU HB3 H N N 95 LEU HG H N N 96 LEU HD11 H N N 97 LEU HD12 H N N 98 LEU HD13 H N N 99 LEU HD21 H N N 100 LEU HD22 H N N 101 LEU HD23 H N N 102 LEU HXT H N N 103 LYS N N N N 104 LYS CA C N S 105 LYS C C N N 106 LYS O O N N 107 LYS CB C N N 108 LYS CG C N N 109 LYS CD C N N 110 LYS CE C N N 111 LYS NZ N N N 112 LYS OXT O N N 113 LYS H H N N 114 LYS H2 H N N 115 LYS HA H N N 116 LYS HB2 H N N 117 LYS HB3 H N N 118 LYS HG2 H N N 119 LYS HG3 H N N 120 LYS HD2 H N N 121 LYS HD3 H N N 122 LYS HE2 H N N 123 LYS HE3 H N N 124 LYS HZ1 H N N 125 LYS HZ2 H N N 126 LYS HZ3 H N N 127 LYS HXT H N N 128 PHE N N N N 129 PHE CA C N S 130 PHE C C N N 131 PHE O O N N 132 PHE CB C N N 133 PHE CG C Y N 134 PHE CD1 C Y N 135 PHE CD2 C Y N 136 PHE CE1 C Y N 137 PHE CE2 C Y N 138 PHE CZ C Y N 139 PHE OXT O N N 140 PHE H H N N 141 PHE H2 H N N 142 PHE HA H N N 143 PHE HB2 H N N 144 PHE HB3 H N N 145 PHE HD1 H N N 146 PHE HD2 H N N 147 PHE HE1 H N N 148 PHE HE2 H N N 149 PHE HZ H N N 150 PHE HXT H N N 151 PRO N N N N 152 PRO CA C N S 153 PRO C C N N 154 PRO O O N N 155 PRO CB C N N 156 PRO CG C N N 157 PRO CD C N N 158 PRO OXT O N N 159 PRO H H N N 160 PRO HA H N N 161 PRO HB2 H N N 162 PRO HB3 H N N 163 PRO HG2 H N N 164 PRO HG3 H N N 165 PRO HD2 H N N 166 PRO HD3 H N N 167 PRO HXT H N N 168 TRP N N N N 169 TRP CA C N S 170 TRP C C N N 171 TRP O O N N 172 TRP CB C N N 173 TRP CG C Y N 174 TRP CD1 C Y N 175 TRP CD2 C Y N 176 TRP NE1 N Y N 177 TRP CE2 C Y N 178 TRP CE3 C Y N 179 TRP CZ2 C Y N 180 TRP CZ3 C Y N 181 TRP CH2 C Y N 182 TRP OXT O N N 183 TRP H H N N 184 TRP H2 H N N 185 TRP HA H N N 186 TRP HB2 H N N 187 TRP HB3 H N N 188 TRP HD1 H N N 189 TRP HE1 H N N 190 TRP HE3 H N N 191 TRP HZ2 H N N 192 TRP HZ3 H N N 193 TRP HH2 H N N 194 TRP HXT H N N 195 VAL N N N N 196 VAL CA C N S 197 VAL C C N N 198 VAL O O N N 199 VAL CB C N N 200 VAL CG1 C N N 201 VAL CG2 C N N 202 VAL OXT O N N 203 VAL H H N N 204 VAL H2 H N N 205 VAL HA H N N 206 VAL HB H N N 207 VAL HG11 H N N 208 VAL HG12 H N N 209 VAL HG13 H N N 210 VAL HG21 H N N 211 VAL HG22 H N N 212 VAL HG23 H N N 213 VAL HXT H N N 214 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 CYS N CA sing N N 39 CYS N H sing N N 40 CYS N H2 sing N N 41 CYS CA C sing N N 42 CYS CA CB sing N N 43 CYS CA HA sing N N 44 CYS C O doub N N 45 CYS C OXT sing N N 46 CYS CB SG sing N N 47 CYS CB HB2 sing N N 48 CYS CB HB3 sing N N 49 CYS SG HG sing N N 50 CYS OXT HXT sing N N 51 GLY N CA sing N N 52 GLY N H sing N N 53 GLY N H2 sing N N 54 GLY CA C sing N N 55 GLY CA HA2 sing N N 56 GLY CA HA3 sing N N 57 GLY C O doub N N 58 GLY C OXT sing N N 59 GLY OXT HXT sing N N 60 LEA C2 O2 sing N N 61 LEA C2 C3 sing N N 62 LEA C2 O1 doub N N 63 LEA O2 HO2 sing N N 64 LEA C3 C4 sing N N 65 LEA C3 H31 sing N N 66 LEA C3 H32 sing N N 67 LEA C4 C5 sing N N 68 LEA C4 H41 sing N N 69 LEA C4 H42 sing N N 70 LEA C5 C6 sing N N 71 LEA C5 H51 sing N N 72 LEA C5 H52 sing N N 73 LEA C6 H61 sing N N 74 LEA C6 H62 sing N N 75 LEA C6 H63 sing N N 76 LEU N CA sing N N 77 LEU N H sing N N 78 LEU N H2 sing N N 79 LEU CA C sing N N 80 LEU CA CB sing N N 81 LEU CA HA sing N N 82 LEU C O doub N N 83 LEU C OXT sing N N 84 LEU CB CG sing N N 85 LEU CB HB2 sing N N 86 LEU CB HB3 sing N N 87 LEU CG CD1 sing N N 88 LEU CG CD2 sing N N 89 LEU CG HG sing N N 90 LEU CD1 HD11 sing N N 91 LEU CD1 HD12 sing N N 92 LEU CD1 HD13 sing N N 93 LEU CD2 HD21 sing N N 94 LEU CD2 HD22 sing N N 95 LEU CD2 HD23 sing N N 96 LEU OXT HXT sing N N 97 LYS N CA sing N N 98 LYS N H sing N N 99 LYS N H2 sing N N 100 LYS CA C sing N N 101 LYS CA CB sing N N 102 LYS CA HA sing N N 103 LYS C O doub N N 104 LYS C OXT sing N N 105 LYS CB CG sing N N 106 LYS CB HB2 sing N N 107 LYS CB HB3 sing N N 108 LYS CG CD sing N N 109 LYS CG HG2 sing N N 110 LYS CG HG3 sing N N 111 LYS CD CE sing N N 112 LYS CD HD2 sing N N 113 LYS CD HD3 sing N N 114 LYS CE NZ sing N N 115 LYS CE HE2 sing N N 116 LYS CE HE3 sing N N 117 LYS NZ HZ1 sing N N 118 LYS NZ HZ2 sing N N 119 LYS NZ HZ3 sing N N 120 LYS OXT HXT sing N N 121 PHE N CA sing N N 122 PHE N H sing N N 123 PHE N H2 sing N N 124 PHE CA C sing N N 125 PHE CA CB sing N N 126 PHE CA HA sing N N 127 PHE C O doub N N 128 PHE C OXT sing N N 129 PHE CB CG sing N N 130 PHE CB HB2 sing N N 131 PHE CB HB3 sing N N 132 PHE CG CD1 doub Y N 133 PHE CG CD2 sing Y N 134 PHE CD1 CE1 sing Y N 135 PHE CD1 HD1 sing N N 136 PHE CD2 CE2 doub Y N 137 PHE CD2 HD2 sing N N 138 PHE CE1 CZ doub Y N 139 PHE CE1 HE1 sing N N 140 PHE CE2 CZ sing Y N 141 PHE CE2 HE2 sing N N 142 PHE CZ HZ sing N N 143 PHE OXT HXT sing N N 144 PRO N CA sing N N 145 PRO N CD sing N N 146 PRO N H sing N N 147 PRO CA C sing N N 148 PRO CA CB sing N N 149 PRO CA HA sing N N 150 PRO C O doub N N 151 PRO C OXT sing N N 152 PRO CB CG sing N N 153 PRO CB HB2 sing N N 154 PRO CB HB3 sing N N 155 PRO CG CD sing N N 156 PRO CG HG2 sing N N 157 PRO CG HG3 sing N N 158 PRO CD HD2 sing N N 159 PRO CD HD3 sing N N 160 PRO OXT HXT sing N N 161 TRP N CA sing N N 162 TRP N H sing N N 163 TRP N H2 sing N N 164 TRP CA C sing N N 165 TRP CA CB sing N N 166 TRP CA HA sing N N 167 TRP C O doub N N 168 TRP C OXT sing N N 169 TRP CB CG sing N N 170 TRP CB HB2 sing N N 171 TRP CB HB3 sing N N 172 TRP CG CD1 doub Y N 173 TRP CG CD2 sing Y N 174 TRP CD1 NE1 sing Y N 175 TRP CD1 HD1 sing N N 176 TRP CD2 CE2 doub Y N 177 TRP CD2 CE3 sing Y N 178 TRP NE1 CE2 sing Y N 179 TRP NE1 HE1 sing N N 180 TRP CE2 CZ2 sing Y N 181 TRP CE3 CZ3 doub Y N 182 TRP CE3 HE3 sing N N 183 TRP CZ2 CH2 doub Y N 184 TRP CZ2 HZ2 sing N N 185 TRP CZ3 CH2 sing Y N 186 TRP CZ3 HZ3 sing N N 187 TRP CH2 HH2 sing N N 188 TRP OXT HXT sing N N 189 VAL N CA sing N N 190 VAL N H sing N N 191 VAL N H2 sing N N 192 VAL CA C sing N N 193 VAL CA CB sing N N 194 VAL CA HA sing N N 195 VAL C O doub N N 196 VAL C OXT sing N N 197 VAL CB CG1 sing N N 198 VAL CB CG2 sing N N 199 VAL CB HB sing N N 200 VAL CG1 HG11 sing N N 201 VAL CG1 HG12 sing N N 202 VAL CG1 HG13 sing N N 203 VAL CG2 HG21 sing N N 204 VAL CG2 HG22 sing N N 205 VAL CG2 HG23 sing N N 206 VAL OXT HXT sing N N 207 # _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _atom_sites.entry_id 2N63 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_