HEADER DE NOVO PROTEIN 27-OCT-15 2N8W TITLE SOLUTION NMR STRUCTURE OF DESIGNED PROTEIN DA05R1, NORTHEAST TITLE 2 STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET OR690 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESIGNED PROTEIN DA05R1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_COMMON: ARTIFICIAL GENE; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PCDB24 KEYWDS DESIGNED PROTEIN, DE NOVO PROTEIN, PSI-BIOLOGY, STRUCTURAL GENOMICS, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.ELETSKY,J.F.FEDERIZON,X.XU,S.PULAVARTI,T.M.JACOBS,B.KUHLMAN, AUTHOR 2 T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 15-MAY-24 2N8W 1 REMARK REVDAT 3 14-JUN-23 2N8W 1 REMARK REVDAT 2 18-MAY-16 2N8W 1 JRNL REVDAT 1 25-NOV-15 2N8W 0 JRNL AUTH T.M.JACOBS,B.WILLIAMS,T.WILLIAMS,X.XU,A.ELETSKY, JRNL AUTH 2 J.F.FEDERIZON,T.SZYPERSKI,B.KUHLMAN JRNL TITL DESIGN OF STRUCTURALLY DISTINCT PROTEINS USING STRATEGIES JRNL TITL 2 INSPIRED BY EVOLUTION. JRNL REF SCIENCE V. 352 687 2016 JRNL REFN ISSN 0036-8075 JRNL PMID 27151863 JRNL DOI 10.1126/SCIENCE.AAD8036 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROSA 6.4, CNS 1.3, CYANA 3.0 REMARK 3 AUTHORS : GUNTERT (PROSA), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N8W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000104569. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 660 UM [U-5% 13C; U-15N] DA05R, REMARK 210 25 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 1 MM PROTEIN INHIBITOR REMARK 210 COCKTAIL, 50 UM DSS, 90% H2O/10% REMARK 210 D2O; 1 MM [U-13C; U-15N] DA05R, REMARK 210 25 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.02 % SODIUM REMARK 210 AZIDE, 1 MM PROTEIN INHIBITOR REMARK 210 COCKTAIL, 50 UM DSS, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D CT 1H-13C REMARK 210 HSQC ALIPHATIC; 2D CT 1H-13C REMARK 210 HSQC AROMATIC; 3D 15N/13C-EDITED REMARK 210 1H-1H NOESY; (4,3)D GFT HCCH- REMARK 210 COSY ALIPHATIC; (4,3)D GFT HCCH- REMARK 210 COSY AROMATIC; 3D HCCH-TOCSY; 3D REMARK 210 HNCO; 3D HN(CA)CO; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 2D CT REMARK 210 1H-13C HSQC ALIPHATIC 28 MS; 3D REMARK 210 1H-15N TOCSY; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AS-DP 1.0, CARA 1.8.4, CYANA REMARK 210 3.0, XEASY 1.3.13, VNMRJ 4.0, REMARK 210 TALOS-N, PSVS 1.5, AUTOASSIGN REMARK 210 2.3.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -49.41 78.62 REMARK 500 1 GLU A 3 -88.03 60.45 REMARK 500 1 LYS A 14 87.57 -66.40 REMARK 500 1 GLU A 17 18.20 -150.92 REMARK 500 1 ASN A 19 39.62 -83.51 REMARK 500 1 MET A 24 -156.66 -129.88 REMARK 500 1 PRO A 79 -160.31 -73.41 REMARK 500 1 GLU A 82 102.99 -52.51 REMARK 500 1 ARG A 84 -83.83 59.78 REMARK 500 1 GLN A 102 -71.87 -82.90 REMARK 500 2 LYS A 14 116.47 69.95 REMARK 500 2 GLU A 16 -60.98 -106.87 REMARK 500 2 MET A 24 -114.07 -123.21 REMARK 500 2 GLU A 82 147.67 71.81 REMARK 500 3 ASP A 2 100.45 60.86 REMARK 500 3 GLU A 3 -37.73 -146.56 REMARK 500 3 LYS A 13 -174.08 55.99 REMARK 500 3 ASN A 19 83.08 67.65 REMARK 500 3 GLU A 22 -61.61 -167.81 REMARK 500 3 MET A 24 -146.80 -82.15 REMARK 500 3 GLU A 80 167.21 67.59 REMARK 500 4 GLU A 3 -66.43 -92.83 REMARK 500 4 ALA A 15 90.76 -172.21 REMARK 500 4 LEU A 18 144.16 75.26 REMARK 500 4 GLU A 22 -55.41 73.13 REMARK 500 5 LYS A 13 -156.36 -112.96 REMARK 500 5 GLN A 20 29.68 -159.80 REMARK 500 5 MET A 24 -153.97 -127.74 REMARK 500 5 GLU A 80 78.24 -66.29 REMARK 500 5 GLU A 81 -151.75 -149.12 REMARK 500 5 GLU A 82 104.17 -59.43 REMARK 500 5 GLU A 86 -66.04 -157.85 REMARK 500 5 ASN A 103 97.28 -69.46 REMARK 500 6 LYS A 14 88.11 -166.97 REMARK 500 6 GLU A 16 -152.29 -145.62 REMARK 500 6 LEU A 18 -166.99 -120.89 REMARK 500 6 MET A 24 -146.63 -126.32 REMARK 500 6 HIS A 59 61.85 61.00 REMARK 500 6 GLU A 86 -77.02 -105.53 REMARK 500 7 LYS A 13 82.23 69.45 REMARK 500 7 LYS A 14 85.91 56.93 REMARK 500 7 GLU A 16 -79.02 -130.91 REMARK 500 7 LEU A 18 141.40 69.08 REMARK 500 7 MET A 24 -153.92 -132.20 REMARK 500 7 GLU A 81 -3.35 70.83 REMARK 500 7 GLU A 82 139.84 -170.50 REMARK 500 7 GLU A 86 -65.81 -104.05 REMARK 500 8 LYS A 14 93.02 60.29 REMARK 500 8 ASN A 19 89.82 -62.48 REMARK 500 8 GLN A 20 -69.38 -142.13 REMARK 500 REMARK 500 THIS ENTRY HAS 132 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25868 RELATED DB: BMRB REMARK 900 RELATED ID: 2N8I RELATED DB: PDB REMARK 900 RELATED ID: NESG-OR690 RELATED DB: TARGETTRACK DBREF 2N8W A 1 104 PDB 2N8W 2N8W 1 104 SEQRES 1 A 104 ALA ASP GLU ASN ILE ALA LYS PHE GLU LYS ALA TYR LYS SEQRES 2 A 104 LYS ALA GLU GLU LEU ASN GLN GLY GLU LEU MET GLY ARG SEQRES 3 A 104 ALA LEU TYR ASN ILE GLY LEU GLU LYS ASN LYS MET GLY SEQRES 4 A 104 LYS ALA ARG GLU ALA ALA GLU TYR PHE PHE ARG ALA ALA SEQRES 5 A 104 ILE VAL PHE TYR LYS GLU HIS ASP THR ASP GLY LEU ARG SEQRES 6 A 104 ARG ALA ALA LYS SER LEU LYS GLU ALA ILE THR ALA ILE SEQRES 7 A 104 PRO GLU GLU GLU GLY ARG LYS GLU ALA LYS GLU MET ALA SEQRES 8 A 104 LYS LYS ALA GLU GLU TRP LEU GLN ALA GLU GLN ASN ASN HELIX 1 1 GLU A 3 TYR A 12 1 10 HELIX 2 2 GLY A 25 MET A 38 1 14 HELIX 3 3 LYS A 40 HIS A 59 1 20 HELIX 4 4 ASP A 60 THR A 76 1 17 HELIX 5 5 GLU A 86 ASN A 103 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1