HEADER LIPID BINDING PROTEIN 28-OCT-15 2N8X TITLE SOLUTION STRUCTURE OF LPTE FROM PSEUDOMONAS AERIGUNOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LPS-ASSEMBLY LIPOPROTEIN LPTE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 21-183; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: LPTE, PA3988, RLPB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PCDFDUET-1 KEYWDS LPS BIOSYNTHESIS, LIPID BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.MOEHLE,H.KOCHERLA,S.JURT,J.ROBINSON,O.ZERBE,K.ZERBE,B.BACSA REVDAT 4 01-MAY-24 2N8X 1 REMARK SEQADV REVDAT 3 29-JUN-16 2N8X 1 JRNL REVDAT 2 01-JUN-16 2N8X 1 ATOM REMARK SEQADV REVDAT 1 25-MAY-16 2N8X 0 JRNL AUTH K.MOEHLE,H.KOCHERLA,B.BACSA,S.JURT,K.ZERBE,J.A.ROBINSON, JRNL AUTH 2 O.ZERBE JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF LPTE FROM PSEUDOMONAS JRNL TITL 2 AERUGINOSA. JRNL REF BIOCHEMISTRY V. 55 2936 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27166502 JRNL DOI 10.1021/ACS.BIOCHEM.6B00313 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1, X-PLOR NIH 2-1.39 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), SCHWIETERS, KUSZEWSKI, REMARK 3 TJANDRA AND CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PROTOCOL INCORPORATING RDCS AS SAMPLE REMARK 3 PROTOCOL FROM NIH PACKAGE REMARK 4 REMARK 4 2N8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000104570. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 55 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM 2H,13C,15N-LABELED REMARK 210 PROTEIN, 50 MM SODIUM PHOSPHATE, REMARK 210 25 MM SODIUM CHLORIDE, 20 MM REMARK 210 CHAPS, 90% H2O/10% D2O; 0.35 MM REMARK 210 13C,15N-LABELED PROTEIN, 50 MM REMARK 210 SODIUM PHOSPHATE, 25 MM SODIUM REMARK 210 CHLORIDE, 20 MM CHAPS, 90% H2O/ REMARK 210 10% D2O; 50 MM SODIUM PHOSPHATE, REMARK 210 25 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCO; 3D HNCACB; 3D REMARK 210 HN(COCA)CB; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D HBHA(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.9, CARA 1.9 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 43 94.00 65.06 REMARK 500 1 ALA A 44 -157.27 61.61 REMARK 500 1 SER A 84 166.37 68.25 REMARK 500 1 ALA A 92 109.23 66.93 REMARK 500 1 ASN A 129 33.93 -95.76 REMARK 500 2 ALA A 30 148.46 -175.47 REMARK 500 2 ARG A 75 121.47 -173.22 REMARK 500 2 SER A 84 -171.21 70.24 REMARK 500 2 ARG A 90 31.76 -62.84 REMARK 500 3 SER A 84 172.07 67.92 REMARK 500 3 ALA A 89 11.08 -69.14 REMARK 500 3 ASN A 108 19.68 58.74 REMARK 500 3 ASN A 129 41.77 -105.25 REMARK 500 4 ASP A 29 117.78 -161.10 REMARK 500 4 ASN A 43 -61.44 69.87 REMARK 500 4 SER A 84 151.81 69.58 REMARK 500 4 ARG A 90 27.05 -76.22 REMARK 500 4 ASN A 129 48.06 -82.71 REMARK 500 5 LEU A 24 -157.64 -117.06 REMARK 500 5 ASN A 43 47.50 14.12 REMARK 500 5 ALA A 44 -171.10 175.80 REMARK 500 5 SER A 84 -127.47 61.42 REMARK 500 5 THR A 86 -93.88 -105.68 REMARK 500 5 ASN A 129 49.78 -94.31 REMARK 500 6 SER A 20 -49.04 -132.35 REMARK 500 6 ASN A 43 -161.83 65.45 REMARK 500 6 PRO A 47 -142.02 -63.14 REMARK 500 6 SER A 84 155.86 69.50 REMARK 500 6 THR A 86 -66.57 -94.60 REMARK 500 6 ASN A 108 17.36 59.79 REMARK 500 7 ASN A 43 99.46 69.24 REMARK 500 7 ALA A 44 -164.74 68.34 REMARK 500 7 ASN A 78 117.63 -166.12 REMARK 500 7 SER A 88 -177.58 70.86 REMARK 500 7 ALA A 89 -170.05 71.94 REMARK 500 7 ALA A 92 -67.27 -104.55 REMARK 500 8 PHE A 22 171.15 68.13 REMARK 500 8 ARG A 25 40.01 -142.06 REMARK 500 8 ASP A 29 75.95 -113.78 REMARK 500 8 SER A 84 165.43 68.76 REMARK 500 8 SER A 88 -151.16 -178.88 REMARK 500 8 GLU A 93 -157.87 -92.81 REMARK 500 9 PRO A 47 -161.59 -65.24 REMARK 500 9 THR A 48 -6.29 -59.47 REMARK 500 9 ASN A 66 45.00 -109.55 REMARK 500 9 SER A 84 -157.80 66.64 REMARK 500 9 SER A 88 -32.21 -150.36 REMARK 500 9 ARG A 90 31.53 -70.60 REMARK 500 9 GLU A 93 -119.94 -105.36 REMARK 500 10 ALA A 30 134.91 -172.99 REMARK 500 REMARK 500 THIS ENTRY HAS 109 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NHR RELATED DB: PDB REMARK 900 LPTE FROM E. COLI REMARK 900 RELATED ID: 4Q35 RELATED DB: PDB REMARK 900 LPTE FROM S. FLEXNERI REMARK 900 RELATED ID: 4N4R RELATED DB: PDB REMARK 900 LPTE FROM S. TYPHIMURIUM REMARK 900 RELATED ID: 2JXP RELATED DB: PDB REMARK 900 LPTE FROM NITROSOMONAS EUROPAEA REMARK 900 RELATED ID: 2R76 RELATED DB: PDB REMARK 900 LPTE FROM SHEWANELLA (S.) ONEIDENSIS REMARK 900 RELATED ID: 3BF2 RELATED DB: PDB REMARK 900 LPTE FROM NEISSERIA MENINGITIDES REMARK 900 RELATED ID: 25869 RELATED DB: BMRB DBREF 2N8X A 21 183 UNP Q9HX32 Q9HX32_PSEAE 21 183 SEQADV 2N8X GLY A 18 UNP Q9HX32 EXPRESSION TAG SEQADV 2N8X THR A 19 UNP Q9HX32 EXPRESSION TAG SEQADV 2N8X SER A 20 UNP Q9HX32 EXPRESSION TAG SEQRES 1 A 166 GLY THR SER GLY PHE GLN LEU ARG GLY LEU GLY ASP ALA SEQRES 2 A 166 GLN PHE ALA LEU LYS GLU ILE ASP VAL SER ALA ARG ASN SEQRES 3 A 166 ALA TYR GLY PRO THR VAL ARG GLU LEU LYS GLU THR LEU SEQRES 4 A 166 GLU ASN SER GLY VAL LYS VAL THR SER ASN ALA PRO TYR SEQRES 5 A 166 HIS LEU VAL LEU VAL ARG GLU ASP ASN GLN GLN ARG THR SEQRES 6 A 166 VAL SER TYR THR GLY SER ALA ARG GLY ALA GLU PHE GLU SEQRES 7 A 166 LEU THR ASN THR ILE ASN TYR GLU ILE VAL GLY ALA ASN SEQRES 8 A 166 ASP LEU VAL LEU MET SER ASN GLN VAL GLN VAL GLN LYS SEQRES 9 A 166 VAL TYR VAL HIS ASP GLU ASN ASN LEU ILE GLY SER ASP SEQRES 10 A 166 GLN GLU ALA ALA GLN LEU ARG SER GLU MET ARG ARG ASP SEQRES 11 A 166 LEU ILE GLN GLN LEU SER MET ARG LEU GLN ALA LEU THR SEQRES 12 A 166 PRO ALA GLN LEU ASP GLU ALA GLN ARG GLN ALA GLU ALA SEQRES 13 A 166 LYS ALA LYS ALA GLU ALA GLU ALA LEU ARG HELIX 1 1 GLY A 46 SER A 59 1 14 HELIX 2 2 ILE A 131 LEU A 156 1 26 HELIX 3 3 GLN A 157 LEU A 159 5 3 HELIX 4 4 THR A 160 LEU A 182 1 23 SHEET 1 A 5 LYS A 62 VAL A 63 0 SHEET 2 A 5 GLU A 36 ALA A 41 1 N ILE A 37 O LYS A 62 SHEET 3 A 5 HIS A 70 SER A 84 1 O LEU A 71 N SER A 40 SHEET 4 A 5 GLU A 93 VAL A 105 -1 O THR A 97 N GLN A 79 SHEET 5 A 5 VAL A 111 VAL A 122 -1 O LEU A 112 N ILE A 104 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1