HEADER GENE REGULATION 23-NOV-15 2N9G TITLE SOLUTION STRUCTURE OF THE BROMODOMAIN OF TRYPANOSOMA BRUCEI TITLE 2 BROMODOMAIN FACTOR 2(BDF2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMO DOMAIN, UNP RESIDUES 1-111; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI TREU927; SOURCE 3 ORGANISM_TAXID: 185431; SOURCE 4 STRAIN: TREU927; SOURCE 5 GENE: TB10.6K15.3240; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-22B KEYWDS GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.YANG REVDAT 2 14-JUN-23 2N9G 1 REMARK REVDAT 1 23-NOV-16 2N9G 0 JRNL AUTH X.YANG JRNL TITL SOLUTION STRUCTURE OF THE BROMODOMAIN OF TRYPANOSOMA BRUCEI JRNL TITL 2 BROMODOMAIN FACTOR 2(BDF2) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000104589. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 150 MM SODIUM CHLORIDE-1, 20 MM REMARK 210 SODIUM PHOSPHATE-2, 1 MM DTT-3, REMARK 210 1 MM EDTA-4, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -170.43 55.00 REMARK 500 1 LYS A 3 -48.03 -149.11 REMARK 500 1 ARG A 6 116.28 -179.24 REMARK 500 1 SER A 9 -53.52 -161.35 REMARK 500 1 ASN A 11 78.67 -103.95 REMARK 500 1 HIS A 32 67.58 -165.17 REMARK 500 1 TYR A 65 -175.04 -62.61 REMARK 500 1 ALA A 66 -37.79 -134.53 REMARK 500 1 THR A 67 -171.76 -170.07 REMARK 500 1 ALA A 87 95.50 -68.36 REMARK 500 1 LYS A 88 -63.38 -124.93 REMARK 500 1 SER A 90 -169.85 -69.48 REMARK 500 1 ALA A 107 45.70 -108.38 REMARK 500 1 ARG A 108 -41.81 -174.91 REMARK 500 2 SER A 2 -173.37 -67.61 REMARK 500 2 LYS A 3 -61.86 -146.99 REMARK 500 2 ARG A 6 -178.47 -59.46 REMARK 500 2 ASP A 7 -41.26 -160.74 REMARK 500 2 SER A 9 -54.40 -161.54 REMARK 500 2 MET A 30 39.03 -96.47 REMARK 500 2 HIS A 32 38.51 -175.55 REMARK 500 2 LYS A 48 -60.15 74.70 REMARK 500 2 PRO A 50 -169.31 -69.72 REMARK 500 2 ALA A 87 95.09 -68.45 REMARK 500 2 LYS A 88 138.50 179.93 REMARK 500 2 SER A 90 -69.35 72.51 REMARK 500 2 ALA A 107 63.26 -115.52 REMARK 500 2 ARG A 108 -69.54 -179.94 REMARK 500 3 SER A 2 -71.19 -160.11 REMARK 500 3 ASP A 7 26.17 -157.68 REMARK 500 3 THR A 8 24.85 -155.18 REMARK 500 3 MET A 30 48.03 -108.42 REMARK 500 3 HIS A 32 49.29 -174.06 REMARK 500 3 LYS A 48 -62.83 73.60 REMARK 500 3 PRO A 50 -169.74 -69.84 REMARK 500 3 ALA A 87 95.36 -68.29 REMARK 500 3 LYS A 88 -74.68 -117.73 REMARK 500 3 ALA A 107 45.05 -95.93 REMARK 500 3 ARG A 108 -35.63 -179.71 REMARK 500 4 LYS A 3 94.18 57.92 REMARK 500 4 ARG A 6 148.99 -173.62 REMARK 500 4 SER A 9 -42.70 -151.84 REMARK 500 4 HIS A 32 59.92 -171.69 REMARK 500 4 TYR A 65 -173.04 -62.99 REMARK 500 4 ALA A 66 -38.88 -131.25 REMARK 500 4 ALA A 87 95.33 -68.40 REMARK 500 4 LYS A 88 32.78 -176.49 REMARK 500 4 SER A 90 -76.75 68.86 REMARK 500 4 ALA A 107 58.80 -112.39 REMARK 500 4 ARG A 108 -57.01 -179.64 REMARK 500 REMARK 500 THIS ENTRY HAS 228 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25905 RELATED DB: BMRB DBREF 2N9G A 1 111 UNP Q38AM1 Q38AM1_TRYB2 1 111 SEQRES 1 A 111 MET SER LYS ASN GLU ARG ASP THR SER PHE ASN LYS ASN SEQRES 2 A 111 GLY CYS LEU VAL PHE VAL SER ARG LEU TRP ASP LEU ASP SEQRES 3 A 111 LYS LEU GLY MET PHE HIS HIS PRO VAL SER ALA GLU GLU SEQRES 4 A 111 LEU PRO ASP TYR HIS THR VAL ILE LYS ARG PRO VAL ASP SEQRES 5 A 111 LEU SER SER ILE ARG ASP GLY ILE GLU LYS GLY THR TYR SEQRES 6 A 111 ALA THR ASP VAL ASP VAL GLN ASN ASP VAL ALA ARG MET SEQRES 7 A 111 ILE THR ASN ALA LEU GLU TYR ASN ALA LYS GLY SER THR SEQRES 8 A 111 TRP TYR GLN GLU ALA MET SER PHE ARG LYS THR TYR LEU SEQRES 9 A 111 ASP LEU ALA ARG GLN SER GLY HELIX 1 1 ASN A 11 ASP A 26 1 16 HELIX 2 2 ASP A 42 ILE A 47 1 6 HELIX 3 3 ASP A 52 GLY A 63 1 12 HELIX 4 4 THR A 67 ALA A 87 1 21 HELIX 5 5 SER A 90 ALA A 107 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1