data_2NA6 # _entry.id 2NA6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104615 RCSB ? ? 2NA6 PDB pdb_00002na6 10.2210/pdb2na6/pdb 25929 BMRB ? ? D_1000104615 WWPDB ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 2NA7 PDB unspecified . 25929 BMRB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2NA6 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2015-12-21 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fu, Q.' 1 'Chou, J.J.' 2 'Wu, H.' 3 'Fu, T.' 4 'Membrane Protein Structures by Solution NMR (MPSbyNMR)' 5 # _citation.id primary _citation.title 'Structural Basis and Functional Role of Intramembrane Trimerization of the Fas/CD95 Death Receptor.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 61 _citation.page_first 602 _citation.page_last 613 _citation.year 2016 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26853147 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2016.01.009 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fu, Q.' 1 ? primary 'Fu, T.M.' 2 ? primary 'Cruz, A.C.' 3 ? primary 'Sengupta, P.' 4 ? primary 'Thomas, S.K.' 5 ? primary 'Wang, S.' 6 ? primary 'Siegel, R.M.' 7 ? primary 'Wu, H.' 8 ? primary 'Chou, J.J.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Tumor necrosis factor receptor superfamily member 6' _entity.formula_weight 3580.494 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Helical transmembrane residues 167-193' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Apo-1 antigen, Apoptosis-mediating surface antigen FAS, FASLG receptor' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RNRLWLLTILVLLIPLVFIYRKYRKRKS _entity_poly.pdbx_seq_one_letter_code_can RNRLWLLTILVLLIPLVFIYRKYRKRKS _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASN n 1 3 ARG n 1 4 LEU n 1 5 TRP n 1 6 LEU n 1 7 LEU n 1 8 THR n 1 9 ILE n 1 10 LEU n 1 11 VAL n 1 12 LEU n 1 13 LEU n 1 14 ILE n 1 15 PRO n 1 16 LEU n 1 17 VAL n 1 18 PHE n 1 19 ILE n 1 20 TYR n 1 21 ARG n 1 22 LYS n 1 23 TYR n 1 24 ARG n 1 25 LYS n 1 26 ARG n 1 27 LYS n 1 28 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Fas, Apt1, Tnfrsf6' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pMM-LR6 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TNR6_MOUSE _struct_ref.pdbx_db_accession P25446 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RNRLWLLTILVLLIPLVFIYRKYRKRK _struct_ref.pdbx_align_begin 167 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NA6 A 1 ? 27 ? P25446 167 ? 193 ? 167 193 2 1 2NA6 B 1 ? 27 ? P25446 167 ? 193 ? 167 193 3 1 2NA6 C 1 ? 27 ? P25446 167 ? 193 ? 167 193 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2NA6 SER A 28 ? UNP P25446 ? ? 'expression tag' 194 1 2 2NA6 SER B 28 ? UNP P25446 ? ? 'expression tag' 194 2 3 2NA6 SER C 28 ? UNP P25446 ? ? 'expression tag' 194 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N TROSY HSQC' 1 2 2 '3D TROSY HNCA' 1 3 2 '3D TROSY HN(CO)CA' 1 4 2 '3D TROSY HN(CA)CO' 1 5 2 '3D TROSY HNCO' 1 6 1 '3D 1H-15N NOESY' 1 7 1 '3D 1H-13C NOESY' 1 8 3 '3D 1H-15N NOESY' 1 9 3 '2D 1H-13C HSQC aliphatic' 1 10 3 '2D 1H-15N TROSY HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;1 mM [U-100% 13C; U-100% 15N] Mouse Fas Transmembrane Domain, 60 mM [U-100% 2H] acyl chains DMPC, 120 mM [U-100% 2H] acyl chains DHPC, 20 mM sodium phosphate, 95% H2O/5% D2O ; 1 '95% H2O/5% D2O' ;1 mM [U-100% 13C; U-100% 15N; U-85% 2H] Mouse Fas Transmembrane Domain, 60 mM DMPC, 120 mM DHPC, 20 mM sodium phosphate, 95% H2O/5% D2O ; 2 '95% H2O/5% D2O' ;0.5 mM [U-100% 15N; U-100% 2H] Mouse Fas Transmembrane Domain, 0.5 mM [U-15% 13C] Mouse Fas Transmembrane Domain, 60 mM [U-100% 2H] acyl chains DMPC, 120 mM [U-100% 2H] acyl chains DHPC, 20 mM sodium phosphate, 95% H2O/5% D2O ; 3 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2NA6 _pdbx_nmr_refine.method 'simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 75 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2NA6 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2NA6 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRPipe ? 2 'Bartels et al.' 'chemical shift assignment' XEASY ? 3 'Bartels et al.' 'data analysis' XEASY ? 4 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' ? 5 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2NA6 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2NA6 _struct.title 'Transmembrane domain of mouse Fas/CD95 death receptor' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NA6 _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text ;transmembrane helix trimer, transmembrane domain, proline-based motif, APOPTOSIS, Structural Genomics, PSI-Biology, Membrane Protein Structures by Solution NMR, MPSbyNMR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 3 ? ILE A 14 ? ARG A 169 ILE A 180 1 ? 12 HELX_P HELX_P2 2 ILE A 14 ? ARG A 24 ? ILE A 180 ARG A 190 1 ? 11 HELX_P HELX_P3 3 ARG B 3 ? LEU B 13 ? ARG B 169 LEU B 179 1 ? 11 HELX_P HELX_P4 4 PRO B 15 ? ARG B 24 ? PRO B 181 ARG B 190 1 ? 10 HELX_P HELX_P5 5 ARG C 3 ? ILE C 14 ? ARG C 169 ILE C 180 1 ? 12 HELX_P HELX_P6 6 ILE C 14 ? ARG C 24 ? ILE C 180 ARG C 190 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2NA6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 167 167 ARG ARG A . n A 1 2 ASN 2 168 168 ASN ASN A . n A 1 3 ARG 3 169 169 ARG ARG A . n A 1 4 LEU 4 170 170 LEU LEU A . n A 1 5 TRP 5 171 171 TRP TRP A . n A 1 6 LEU 6 172 172 LEU LEU A . n A 1 7 LEU 7 173 173 LEU LEU A . n A 1 8 THR 8 174 174 THR THR A . n A 1 9 ILE 9 175 175 ILE ILE A . n A 1 10 LEU 10 176 176 LEU LEU A . n A 1 11 VAL 11 177 177 VAL VAL A . n A 1 12 LEU 12 178 178 LEU LEU A . n A 1 13 LEU 13 179 179 LEU LEU A . n A 1 14 ILE 14 180 180 ILE ILE A . n A 1 15 PRO 15 181 181 PRO PRO A . n A 1 16 LEU 16 182 182 LEU LEU A . n A 1 17 VAL 17 183 183 VAL VAL A . n A 1 18 PHE 18 184 184 PHE PHE A . n A 1 19 ILE 19 185 185 ILE ILE A . n A 1 20 TYR 20 186 186 TYR TYR A . n A 1 21 ARG 21 187 187 ARG ARG A . n A 1 22 LYS 22 188 188 LYS LYS A . n A 1 23 TYR 23 189 189 TYR TYR A . n A 1 24 ARG 24 190 190 ARG ARG A . n A 1 25 LYS 25 191 191 LYS LYS A . n A 1 26 ARG 26 192 192 ARG ARG A . n A 1 27 LYS 27 193 193 LYS LYS A . n A 1 28 SER 28 194 194 SER SER A . n B 1 1 ARG 1 167 167 ARG ARG B . n B 1 2 ASN 2 168 168 ASN ASN B . n B 1 3 ARG 3 169 169 ARG ARG B . n B 1 4 LEU 4 170 170 LEU LEU B . n B 1 5 TRP 5 171 171 TRP TRP B . n B 1 6 LEU 6 172 172 LEU LEU B . n B 1 7 LEU 7 173 173 LEU LEU B . n B 1 8 THR 8 174 174 THR THR B . n B 1 9 ILE 9 175 175 ILE ILE B . n B 1 10 LEU 10 176 176 LEU LEU B . n B 1 11 VAL 11 177 177 VAL VAL B . n B 1 12 LEU 12 178 178 LEU LEU B . n B 1 13 LEU 13 179 179 LEU LEU B . n B 1 14 ILE 14 180 180 ILE ILE B . n B 1 15 PRO 15 181 181 PRO PRO B . n B 1 16 LEU 16 182 182 LEU LEU B . n B 1 17 VAL 17 183 183 VAL VAL B . n B 1 18 PHE 18 184 184 PHE PHE B . n B 1 19 ILE 19 185 185 ILE ILE B . n B 1 20 TYR 20 186 186 TYR TYR B . n B 1 21 ARG 21 187 187 ARG ARG B . n B 1 22 LYS 22 188 188 LYS LYS B . n B 1 23 TYR 23 189 189 TYR TYR B . n B 1 24 ARG 24 190 190 ARG ARG B . n B 1 25 LYS 25 191 191 LYS LYS B . n B 1 26 ARG 26 192 192 ARG ARG B . n B 1 27 LYS 27 193 193 LYS LYS B . n B 1 28 SER 28 194 194 SER SER B . n C 1 1 ARG 1 167 167 ARG ARG C . n C 1 2 ASN 2 168 168 ASN ASN C . n C 1 3 ARG 3 169 169 ARG ARG C . n C 1 4 LEU 4 170 170 LEU LEU C . n C 1 5 TRP 5 171 171 TRP TRP C . n C 1 6 LEU 6 172 172 LEU LEU C . n C 1 7 LEU 7 173 173 LEU LEU C . n C 1 8 THR 8 174 174 THR THR C . n C 1 9 ILE 9 175 175 ILE ILE C . n C 1 10 LEU 10 176 176 LEU LEU C . n C 1 11 VAL 11 177 177 VAL VAL C . n C 1 12 LEU 12 178 178 LEU LEU C . n C 1 13 LEU 13 179 179 LEU LEU C . n C 1 14 ILE 14 180 180 ILE ILE C . n C 1 15 PRO 15 181 181 PRO PRO C . n C 1 16 LEU 16 182 182 LEU LEU C . n C 1 17 VAL 17 183 183 VAL VAL C . n C 1 18 PHE 18 184 184 PHE PHE C . n C 1 19 ILE 19 185 185 ILE ILE C . n C 1 20 TYR 20 186 186 TYR TYR C . n C 1 21 ARG 21 187 187 ARG ARG C . n C 1 22 LYS 22 188 188 LYS LYS C . n C 1 23 TYR 23 189 189 TYR TYR C . n C 1 24 ARG 24 190 190 ARG ARG C . n C 1 25 LYS 25 191 191 LYS LYS C . n C 1 26 ARG 26 192 192 ARG ARG C . n C 1 27 LYS 27 193 193 LYS LYS C . n C 1 28 SER 28 194 194 SER SER C . n # _pdbx_SG_project.full_name_of_center 'Membrane Protein Structures by Solution NMR' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center MPSbyNMR _pdbx_SG_project.project_name PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-27 2 'Structure model' 1 1 2016-03-02 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Mouse Fas Transmembrane Domain-1' 1 ? mM '[U-100% 13C; U-100% 15N]' 1 DMPC-2 60 ? mM '[U-100% 2H] acyl chains' 1 DHPC-3 120 ? mM '[U-100% 2H] acyl chains' 1 'sodium phosphate-4' 20 ? mM ? 1 'Mouse Fas Transmembrane Domain-5' 1 ? mM '[U-100% 13C; U-100% 15N; U-85% 2H]' 2 DMPC-6 60 ? mM ? 2 DHPC-7 120 ? mM ? 2 'sodium phosphate-8' 20 ? mM ? 2 'Mouse Fas Transmembrane Domain-9' 0.5 ? mM '[U-100% 15N; U-100% 2H]' 3 'Mouse Fas Transmembrane Domain-10' 0.5 ? mM '[U-15% 13C]' 3 DMPC-11 60 ? mM '[U-100% 2H] acyl chains' 3 DHPC-12 120 ? mM '[U-100% 2H] acyl chains' 3 'sodium phosphate-13' 20 ? mM ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H2 A ARG 167 ? ? H A ASN 168 ? ? 1.35 2 2 HH B TYR 186 ? ? HZ2 B LYS 193 ? ? 1.27 3 9 H3 A ARG 167 ? ? H A ASN 168 ? ? 1.28 4 13 HH12 B ARG 187 ? ? HH21 C ARG 187 ? ? 1.33 5 15 HH21 A ARG 187 ? ? HH21 B ARG 190 ? ? 1.26 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 181 ? ? -58.93 -9.96 2 1 LYS A 191 ? ? -73.12 46.87 3 1 ARG A 192 ? ? 41.07 -125.44 4 1 ASN B 168 ? ? -160.96 100.52 5 1 ARG B 190 ? ? 87.93 -142.81 6 1 ARG B 192 ? ? -115.45 -94.48 7 1 LYS B 193 ? ? 69.28 -70.90 8 1 ASN C 168 ? ? -173.87 -168.03 9 1 ARG C 169 ? ? 60.75 -82.91 10 1 ARG C 190 ? ? -27.47 88.14 11 2 ARG A 190 ? ? 62.81 -69.99 12 2 ARG A 192 ? ? -151.44 -62.94 13 2 ASN B 168 ? ? -100.01 42.16 14 2 ARG B 190 ? ? 33.60 40.31 15 2 LYS B 191 ? ? -91.88 -113.24 16 2 LYS B 193 ? ? -171.36 -55.75 17 2 ARG C 190 ? ? -46.70 169.78 18 3 ASN A 168 ? ? 57.92 115.92 19 3 ARG A 169 ? ? -148.85 -21.39 20 3 ARG A 190 ? ? 55.60 -80.68 21 3 LYS A 191 ? ? -46.18 172.63 22 3 ARG A 192 ? ? 96.91 135.51 23 3 LYS A 193 ? ? 55.77 -78.74 24 3 ASN B 168 ? ? -175.05 55.62 25 3 ARG B 169 ? ? -175.25 43.71 26 3 ARG B 190 ? ? 32.79 -84.62 27 3 LYS B 193 ? ? -150.21 -16.86 28 3 ASN C 168 ? ? -68.37 -179.27 29 3 ARG C 190 ? ? 66.41 157.23 30 3 LYS C 191 ? ? -152.42 84.10 31 3 ARG C 192 ? ? -48.48 166.70 32 3 LYS C 193 ? ? -153.01 -45.57 33 4 ASN A 168 ? ? -49.20 -177.07 34 4 ARG A 169 ? ? -141.33 31.55 35 4 ARG A 190 ? ? 11.22 -111.36 36 4 LYS A 191 ? ? 78.51 -164.99 37 4 ASN B 168 ? ? -43.57 166.97 38 4 ARG B 169 ? ? -162.05 0.99 39 4 ARG B 190 ? ? 40.47 -84.14 40 4 LYS B 191 ? ? -53.59 -172.47 41 4 ARG B 192 ? ? -149.36 -132.19 42 4 LYS B 193 ? ? -148.53 -57.06 43 4 ASN C 168 ? ? 61.51 175.11 44 4 ARG C 169 ? ? 54.34 89.38 45 4 PRO C 181 ? ? -59.74 -9.68 46 4 ARG C 190 ? ? 23.10 -114.56 47 4 LYS C 191 ? ? 56.81 136.47 48 4 ARG C 192 ? ? -172.89 122.37 49 5 ILE A 180 ? ? -48.68 -19.84 50 5 PRO A 181 ? ? -59.49 -9.64 51 5 LYS A 193 ? ? 71.89 157.29 52 5 ARG B 190 ? ? 93.75 171.41 53 5 ASN C 168 ? ? 62.42 166.87 54 5 ARG C 169 ? ? -170.08 -7.73 55 5 LYS C 191 ? ? -101.09 -67.96 56 5 ARG C 192 ? ? -168.10 -16.81 57 5 LYS C 193 ? ? 59.55 -81.03 58 6 PRO A 181 ? ? -48.97 -10.14 59 6 ARG A 190 ? ? 61.93 92.65 60 6 LYS A 191 ? ? 59.09 116.78 61 6 ARG A 192 ? ? -170.00 -10.68 62 6 ASN B 168 ? ? -64.74 -150.48 63 6 ARG B 190 ? ? -24.97 -97.42 64 6 LYS B 191 ? ? 55.86 158.34 65 6 ASN C 168 ? ? 57.83 86.51 66 6 ARG C 169 ? ? -172.85 44.29 67 6 ILE C 180 ? ? -48.65 -17.74 68 6 ARG C 190 ? ? 55.16 176.27 69 6 LYS C 193 ? ? -60.05 -73.72 70 7 ARG A 169 ? ? -163.64 -21.20 71 7 ILE A 180 ? ? -36.66 -36.41 72 7 PRO A 181 ? ? -32.55 -17.03 73 7 ARG A 190 ? ? 33.37 36.39 74 7 LYS A 193 ? ? -153.70 68.72 75 7 ASN B 168 ? ? -159.95 -34.74 76 7 ARG B 169 ? ? 70.19 -44.80 77 7 ARG B 190 ? ? -2.40 -59.28 78 7 ARG B 192 ? ? -59.28 75.16 79 7 LYS B 193 ? ? 54.38 -155.24 80 7 ARG C 169 ? ? -140.78 27.73 81 7 ARG C 190 ? ? 29.63 47.39 82 8 PRO A 181 ? ? -59.81 -9.68 83 8 ARG A 190 ? ? -13.73 78.68 84 8 LYS A 191 ? ? -156.21 70.97 85 8 LYS A 193 ? ? -106.73 45.54 86 8 ASN B 168 ? ? -151.83 18.63 87 8 ARG B 190 ? ? 5.15 61.98 88 8 LYS B 191 ? ? 56.89 114.84 89 8 ARG B 192 ? ? -69.01 -173.15 90 8 ARG C 169 ? ? 32.45 48.26 91 8 LYS C 191 ? ? -81.54 -75.64 92 8 ARG C 192 ? ? 66.37 138.42 93 8 LYS C 193 ? ? -143.31 -3.71 94 9 ASN A 168 ? ? -93.40 -144.60 95 9 ARG A 169 ? ? -165.11 16.13 96 9 ARG A 190 ? ? 91.10 -28.05 97 9 ARG B 190 ? ? 54.98 8.78 98 9 ASN C 168 ? ? 66.08 -154.40 99 9 ARG C 169 ? ? -157.87 -6.85 100 9 LYS C 193 ? ? -159.35 -60.13 101 10 ARG A 169 ? ? -145.71 -71.14 102 10 ARG A 190 ? ? 64.37 -138.58 103 10 LYS A 191 ? ? 32.75 -130.28 104 10 ARG A 192 ? ? -159.87 -97.03 105 10 LYS A 193 ? ? 55.66 70.09 106 10 ARG B 190 ? ? 33.89 -87.56 107 10 LYS B 191 ? ? -153.49 -129.80 108 10 ARG B 192 ? ? 57.72 -74.89 109 10 ASN C 168 ? ? 52.71 -178.42 110 10 ARG C 190 ? ? 16.65 -80.66 111 10 LYS C 191 ? ? -104.91 -117.40 112 10 ARG C 192 ? ? 30.79 83.20 113 10 LYS C 193 ? ? 78.57 84.94 114 11 ASN A 168 ? ? -151.03 63.24 115 11 ARG A 169 ? ? -172.00 -26.91 116 11 ARG A 190 ? ? 56.05 -148.99 117 11 ARG A 192 ? ? -39.96 118.58 118 11 LYS A 193 ? ? 44.60 83.59 119 11 ARG B 169 ? ? -140.66 10.17 120 11 ARG B 190 ? ? 36.93 -127.47 121 11 LYS B 191 ? ? 31.28 -104.86 122 11 ARG B 192 ? ? 57.71 143.70 123 11 ARG C 169 ? ? -156.14 -18.01 124 11 ARG C 190 ? ? 115.17 122.04 125 11 ARG C 192 ? ? 47.53 -134.97 126 12 ARG A 169 ? ? -149.53 -16.67 127 12 LYS A 191 ? ? -161.95 -44.57 128 12 ASN B 168 ? ? -170.47 54.28 129 12 ARG B 169 ? ? -140.70 -5.21 130 12 LYS B 191 ? ? -141.73 -71.20 131 12 ARG C 169 ? ? -163.27 9.40 132 12 PRO C 181 ? ? -52.10 -9.67 133 12 ARG C 190 ? ? -46.64 86.38 134 12 LYS C 191 ? ? 5.23 60.88 135 12 ARG C 192 ? ? 32.03 -153.87 136 12 LYS C 193 ? ? -121.86 -52.36 137 13 ASN A 168 ? ? 40.73 80.19 138 13 PRO A 181 ? ? -50.00 -9.68 139 13 ARG A 190 ? ? -21.75 -42.09 140 13 LYS A 191 ? ? -68.65 -172.50 141 13 LYS A 193 ? ? -152.50 19.76 142 13 ARG B 169 ? ? -172.17 26.80 143 13 ARG B 190 ? ? 42.92 -155.74 144 13 LYS B 191 ? ? -170.49 -47.65 145 13 LYS B 193 ? ? 65.94 113.18 146 13 ASN C 168 ? ? -161.68 -131.54 147 13 ARG C 190 ? ? 42.54 -159.40 148 13 LYS C 193 ? ? -49.72 -73.21 149 14 ASN A 168 ? ? -152.69 56.94 150 14 ARG A 190 ? ? 51.48 -178.03 151 14 LYS A 191 ? ? -73.82 -164.70 152 14 LYS A 193 ? ? 55.30 113.76 153 14 ASN B 168 ? ? -81.02 -133.53 154 14 ARG B 190 ? ? -39.66 -22.35 155 14 LYS B 191 ? ? 57.62 -171.30 156 14 ARG B 192 ? ? 66.51 72.53 157 14 ASN C 168 ? ? 64.44 105.79 158 14 ARG C 190 ? ? -48.67 -178.07 159 14 LYS C 191 ? ? 97.65 -21.91 160 14 LYS C 193 ? ? 70.05 35.03 161 15 ASN A 168 ? ? -119.09 -135.35 162 15 ARG A 190 ? ? 38.68 -152.20 163 15 LYS A 191 ? ? -97.00 -143.62 164 15 ASN B 168 ? ? -151.43 75.63 165 15 ARG B 169 ? ? -140.30 13.09 166 15 ARG B 190 ? ? -51.39 90.73 167 15 LYS B 191 ? ? -134.00 -57.77 168 15 ASN C 168 ? ? -140.11 15.97 169 15 LYS C 191 ? ? -48.48 109.77 170 15 ARG C 192 ? ? -164.43 -14.09 #