HEADER APOPTOSIS 21-DEC-15 2NA7 TITLE TRANSMEMBRANE DOMAIN OF HUMAN FAS/CD95 DEATH RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 6; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: HELICAL TRANSMEMBRANE RESIDUES 171-198; COMPND 5 SYNONYM: APO-1 ANTIGEN, APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS, COMPND 6 FASLG RECEPTOR; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FAS, APT1, FAS1, TNFRSF6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PMM-LR6 KEYWDS TRANSMEMBRANE HELIX TRIMER, TRANSMEMBRANE DOMAIN, PROLINE-CONTAINING KEYWDS 2 MOTIF, APOPTOSIS, STRUCTURAL GENOMICS, PSI-BIOLOGY, MEMBRANE PROTEIN KEYWDS 3 STRUCTURES BY SOLUTION NMR, MPSBYNMR EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR Q.FU,J.J.CHOU,MEMBRANE PROTEIN STRUCTURES BY SOLUTION NMR (MPSBYNMR) REVDAT 3 14-JUN-23 2NA7 1 REMARK SEQADV REVDAT 2 02-MAR-16 2NA7 1 JRNL REVDAT 1 27-JAN-16 2NA7 0 JRNL AUTH Q.FU,T.M.FU,A.C.CRUZ,P.SENGUPTA,S.K.THOMAS,S.WANG, JRNL AUTH 2 R.M.SIEGEL,H.WU,J.J.CHOU JRNL TITL STRUCTURAL BASIS AND FUNCTIONAL ROLE OF INTRAMEMBRANE JRNL TITL 2 TRIMERIZATION OF THE FAS/CD95 DEATH RECEPTOR. JRNL REF MOL.CELL V. 61 602 2016 JRNL REFN ISSN 1097-2765 JRNL PMID 26853147 JRNL DOI 10.1016/J.MOLCEL.2016.01.009 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000104616. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 HUMAN FAS TRANSMEMBRANE DOMAIN, REMARK 210 60 MM [U-100% 2H] ACYL CHAINS REMARK 210 DMPC, 120 MM [U-100% 2H] ACYL REMARK 210 CHAINS DHPC, 20 MM SODIUM REMARK 210 PHOSPHATE, 95% H2O/5% D2O; 1 MM REMARK 210 [U-100% 13C; U-100% 15N; U-85% REMARK 210 2H] HUMAN FAS TRANSMEMBRANE REMARK 210 DOMAIN, 60 MM DMPC, 120 MM DHPC, REMARK 210 20 MM SODIUM PHOSPHATE, 95% H2O/ REMARK 210 5% D2O; 0.5 MM [U-100% 15N; U- REMARK 210 100% 2H] HUMAN FAS TRANSMEMBRANE REMARK 210 DOMAIN, 0.5 MM [U-15% 13C] HUMAN REMARK 210 FAS TRANSMEMBRANE DOMAIN, 60 MM REMARK 210 [U-100% 2H] ACYL CHAINS DMPC, REMARK 210 120 MM [U-100% 2H] ACYL CHAINS REMARK 210 DHPC, 20 MM SODIUM PHOSPHATE, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N TROSY HSQC; 3D TROSY REMARK 210 HNCA; 3D TROSY HN(CA)CO; 3D REMARK 210 TROSY HNCO; 3D 15N NOESY TROSY; REMARK 210 3D 13C NOESY FOR METHYLS; 2D 1H- REMARK 210 13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, XEASY, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 75 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 194 82.70 56.86 REMARK 500 1 GLN A 196 -175.23 -59.75 REMARK 500 1 LYS A 197 -132.86 43.26 REMARK 500 1 GLU B 194 -172.75 174.58 REMARK 500 1 VAL B 195 -44.34 -134.43 REMARK 500 1 GLN B 196 -28.80 -153.52 REMARK 500 1 LYS B 197 -129.06 -168.08 REMARK 500 1 SER C 172 -57.14 -142.33 REMARK 500 1 GLU C 194 -140.64 63.02 REMARK 500 1 VAL C 195 -178.84 43.70 REMARK 500 1 LYS C 197 28.33 -170.37 REMARK 500 2 ASN A 173 -26.76 -144.98 REMARK 500 2 GLU A 194 -165.59 41.49 REMARK 500 2 VAL A 195 98.27 34.94 REMARK 500 2 LYS A 197 -177.70 48.66 REMARK 500 2 SER B 172 -138.73 -174.25 REMARK 500 2 GLU B 194 158.16 -42.27 REMARK 500 2 VAL B 195 -21.37 -171.77 REMARK 500 2 GLN B 196 101.09 -44.94 REMARK 500 2 GLU C 194 70.32 -67.54 REMARK 500 2 LYS C 197 68.88 66.92 REMARK 500 3 SER A 172 -152.86 -155.03 REMARK 500 3 VAL A 195 -36.72 -162.75 REMARK 500 3 ASN B 173 108.06 -44.43 REMARK 500 3 GLU B 194 100.65 53.99 REMARK 500 3 GLN B 196 -52.21 -166.01 REMARK 500 3 LYS B 197 -48.56 -168.87 REMARK 500 3 ASN C 173 -98.89 50.71 REMARK 500 3 GLU C 194 127.84 65.87 REMARK 500 3 GLN C 196 -54.29 -124.81 REMARK 500 4 ASN A 173 -51.99 -141.50 REMARK 500 4 GLU A 194 134.73 57.99 REMARK 500 4 GLN A 196 -114.46 -172.03 REMARK 500 4 LYS A 197 -78.70 -167.53 REMARK 500 4 SER B 172 92.52 -175.64 REMARK 500 4 GLU B 194 -141.02 -177.70 REMARK 500 4 GLN B 196 -131.15 -59.56 REMARK 500 4 LYS B 197 -129.34 -163.23 REMARK 500 4 SER C 172 137.91 60.73 REMARK 500 4 GLU C 194 -178.14 115.88 REMARK 500 4 GLN C 196 141.92 -38.74 REMARK 500 4 LYS C 197 73.73 -65.30 REMARK 500 5 SER A 172 179.85 51.13 REMARK 500 5 ASN A 173 4.81 58.28 REMARK 500 5 GLU A 194 98.52 50.26 REMARK 500 5 LYS A 197 -84.57 -57.50 REMARK 500 5 GLU B 194 -134.02 179.88 REMARK 500 5 VAL B 195 -102.56 -130.62 REMARK 500 5 PRO C 185 -25.41 -39.85 REMARK 500 5 GLU C 194 -19.91 81.17 REMARK 500 REMARK 500 THIS ENTRY HAS 148 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NA6 RELATED DB: PDB REMARK 900 RELATED ID: 25930 RELATED DB: BMRB DBREF 2NA7 A 171 198 UNP P25445 TNR6_HUMAN 171 198 DBREF 2NA7 B 171 198 UNP P25445 TNR6_HUMAN 171 198 DBREF 2NA7 C 171 198 UNP P25445 TNR6_HUMAN 171 198 SEQADV 2NA7 SER A 178 UNP P25445 CYS 178 CONFLICT SEQADV 2NA7 SER B 178 UNP P25445 CYS 178 CONFLICT SEQADV 2NA7 SER C 178 UNP P25445 CYS 178 CONFLICT SEQRES 1 A 28 ARG SER ASN LEU GLY TRP LEU SER LEU LEU LEU LEU PRO SEQRES 2 A 28 ILE PRO LEU ILE VAL TRP VAL LYS ARG LYS GLU VAL GLN SEQRES 3 A 28 LYS THR SEQRES 1 B 28 ARG SER ASN LEU GLY TRP LEU SER LEU LEU LEU LEU PRO SEQRES 2 B 28 ILE PRO LEU ILE VAL TRP VAL LYS ARG LYS GLU VAL GLN SEQRES 3 B 28 LYS THR SEQRES 1 C 28 ARG SER ASN LEU GLY TRP LEU SER LEU LEU LEU LEU PRO SEQRES 2 C 28 ILE PRO LEU ILE VAL TRP VAL LYS ARG LYS GLU VAL GLN SEQRES 3 C 28 LYS THR HELIX 1 1 ASN A 173 LEU A 182 1 10 HELIX 2 2 PRO A 183 GLU A 194 1 12 HELIX 3 3 ASN B 173 LEU B 182 1 10 HELIX 4 4 ILE B 184 GLU B 194 1 11 HELIX 5 5 SER C 172 LEU C 182 1 11 HELIX 6 6 ILE C 184 GLU C 194 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1