HEADER ANTIFUNGAL PROTEIN 18-JAN-16 2NB0 TITLE STRUCTURE OF D19S VARIANT OF THE PENICILLIUM ANTIFUNGAL PROTEIN (PAF) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIFUNGAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUE 38-92; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM CHRYSOGENUM; SOURCE 3 ORGANISM_TAXID: 5076; SOURCE 4 GENE: PAF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PSK275 KEYWDS ANTIFUNGAL, PAF, ANTIFUNGAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.FIZIL,G.BATTA REVDAT 2 14-JUN-23 2NB0 1 REMARK SEQADV REVDAT 1 18-JAN-17 2NB0 0 JRNL AUTH C.SONDEREGGER,A.FIZIL,L.BURTSCHER,D.HAJDU,A.MUNOZ,Z.GASPARI, JRNL AUTH 2 N.D.READ,G.BATTA,F.MARX JRNL TITL D19S MUTATION OF THE CATIONIC, CYSTEINE-RICH PROTEIN PAF: JRNL TITL 2 NOVEL INSIGHTS INTO ITS STRUCTURAL DYNAMICS, THERMAL JRNL TITL 3 UNFOLDING AND ANTIFUNGAL FUNCTION. JRNL REF PLOS ONE V. 12 69920 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28072824 JRNL DOI 10.1371/JOURNAL.PONE.0169920 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1, TALOS TALOS +, CYANA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), CORNILESCU, DELAGLIO AND REMARK 3 BAX (TALOS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000104642. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : 0.02 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.7 MM [U-100% 15N] PAFD19S, 5 REMARK 210 V/V [U-2H] D2O, 40 MM SODIUM REMARK 210 CHLORIDE, 10 MM SODIUM PHOSPHATE, REMARK 210 0.04 % POTASSIUM PHOSPHATE, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 3D HNHA; 3D 1H-15N NOESY; 3D 1H- REMARK 210 15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, CARA 1.9, CYANA REMARK 210 2.1, ATNOS-CANDID REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 14 SG CYS A 43 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 -75.60 -144.79 REMARK 500 1 PRO A 29 -164.06 -69.70 REMARK 500 1 LYS A 34 35.06 -149.56 REMARK 500 1 ASN A 41 -84.70 -49.60 REMARK 500 1 LYS A 42 35.76 -153.64 REMARK 500 2 LYS A 2 -76.59 -106.19 REMARK 500 2 PRO A 29 -163.75 -69.73 REMARK 500 2 LYS A 34 34.64 -150.37 REMARK 500 2 ASN A 41 -84.64 -49.48 REMARK 500 2 LYS A 42 35.47 -153.93 REMARK 500 3 LYS A 2 -74.81 -144.22 REMARK 500 3 PRO A 29 -163.84 -69.75 REMARK 500 3 LYS A 34 34.42 -145.41 REMARK 500 3 LYS A 38 150.12 -48.99 REMARK 500 3 ASN A 41 -84.99 -50.27 REMARK 500 3 LYS A 42 34.92 -153.78 REMARK 500 4 LYS A 2 -75.71 69.06 REMARK 500 4 PRO A 29 -164.65 -69.73 REMARK 500 4 LYS A 34 36.28 -149.06 REMARK 500 4 LYS A 38 151.82 -49.57 REMARK 500 4 ASN A 41 -85.57 -50.01 REMARK 500 4 LYS A 42 34.59 -154.04 REMARK 500 5 LYS A 2 -74.02 -152.35 REMARK 500 5 PRO A 29 -164.54 -69.78 REMARK 500 5 LYS A 34 34.75 -145.28 REMARK 500 5 LYS A 38 157.97 -48.32 REMARK 500 5 ASN A 41 -85.36 -51.46 REMARK 500 5 LYS A 42 36.84 -155.75 REMARK 500 5 ASN A 50 23.78 48.67 REMARK 500 6 LYS A 2 -74.67 -147.45 REMARK 500 6 PRO A 29 -164.34 -69.75 REMARK 500 6 LYS A 34 34.44 -144.82 REMARK 500 6 ASN A 41 -85.31 -50.34 REMARK 500 6 LYS A 42 35.71 -153.68 REMARK 500 7 LYS A 2 -74.98 -109.49 REMARK 500 7 ASN A 18 -169.49 -126.20 REMARK 500 7 PRO A 29 -165.57 -69.77 REMARK 500 7 LYS A 34 37.31 -151.36 REMARK 500 7 LYS A 38 152.24 -49.50 REMARK 500 7 ASN A 41 -85.44 -49.59 REMARK 500 7 LYS A 42 36.11 -153.60 REMARK 500 7 ASN A 50 24.08 48.41 REMARK 500 8 LYS A 2 -74.96 -142.31 REMARK 500 8 PRO A 29 -163.67 -69.82 REMARK 500 8 LYS A 34 33.80 -150.21 REMARK 500 8 ASN A 41 -85.04 -49.84 REMARK 500 8 LYS A 42 36.29 -154.11 REMARK 500 9 LYS A 2 -75.03 -118.38 REMARK 500 9 PRO A 29 -164.91 -69.76 REMARK 500 9 LYS A 34 35.43 -147.70 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2MHV RELATED DB: PDB REMARK 900 STRUCTURE OF PENICILLIUM ANTIFUNGAL PROTEIN (PAF) WITH THE NATIVE REMARK 900 SEQUENCE REMARK 900 RELATED ID: 19657 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFT LIST OF 15N-13C LABELLED PAF WITH THE NATIVE SEQUENCE REMARK 900 RELATED ID: 25957 RELATED DB: BMRB DBREF 2NB0 A 1 55 UNP Q01701 Q01701_PENCH 38 92 SEQADV 2NB0 SER A 19 UNP Q01701 ASP 56 CONFLICT SEQRES 1 A 55 ALA LYS TYR THR GLY LYS CYS THR LYS SER LYS ASN GLU SEQRES 2 A 55 CYS LYS TYR LYS ASN SER ALA GLY LYS ASP THR PHE ILE SEQRES 3 A 55 LYS CYS PRO LYS PHE ASP ASN LYS LYS CYS THR LYS ASP SEQRES 4 A 55 ASN ASN LYS CYS THR VAL ASP THR TYR ASN ASN ALA VAL SEQRES 5 A 55 ASP CYS ASP HELIX 1 1 LYS A 38 CYS A 43 1 6 SHEET 1 A 2 TYR A 3 THR A 4 0 SHEET 2 A 2 THR A 44 VAL A 45 -1 O VAL A 45 N TYR A 3 SHEET 1 B 3 LYS A 6 CYS A 7 0 SHEET 2 B 3 GLU A 13 TYR A 16 -1 O LYS A 15 N LYS A 6 SHEET 3 B 3 THR A 24 LYS A 27 -1 O ILE A 26 N CYS A 14 SSBOND 1 CYS A 7 CYS A 36 1555 1555 1.97 SSBOND 2 CYS A 28 CYS A 54 1555 1555 1.97 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1