HEADER PROTEIN BINDING 25-FEB-16 2NBK OBSLTE 04-APR-18 2NBK 6CO4 TITLE PROTEIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUE 20-130; COMPND 5 SYNONYM: 110 KDA CELL MEMBRANE GLYCOPROTEIN, GP110, ADHESION- COMPND 6 REGULATING MOLECULE 1, ARM-1, PROTEASOME REGULATORY PARTICLE NON- COMPND 7 ATPASE 13, HRPN13, RPN13 HOMOLOG; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 940-953; COMPND 13 SYNONYM: 26S PROTEASOME REGULATORY SUBUNIT RPN2, 26S PROTEASOME COMPND 14 REGULATORY SUBUNIT S1, 26S PROTEASOME SUBUNIT P112; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADRM1, GP110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PRSET; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: PSMD1; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PRSET KEYWDS PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR X.LU,K.WALTERS REVDAT 2 04-APR-18 2NBK 1 OBSLTE REVDAT 1 21-JUN-17 2NBK 0 JRNL AUTH X.LU,U.NOWICKA,V.SRIDHARAN,F.LIU,L.RANDLES,D.HYMEL,M.DYBA, JRNL AUTH 2 S.G.TARASOV,N.I.TARASOVA,X.Z.ZHAO,J.HAMAZAKI,S.MURATA, JRNL AUTH 3 T.R.BURKE,K.J.WALTERS JRNL TITL STRUCTURE OF THE RPN13-RPN2 COMPLEX PROVIDES INSIGHTS FOR JRNL TITL 2 RPN13 AND UCH37 AS ANTICANCER TARGETS. JRNL REF NAT COMMUN V. 8 15540 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28598414 JRNL DOI 10.1038/NCOMMS15540 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XEASY, X-PLOR_NIH REMARK 3 AUTHORS : BARTELS ET AL. (XEASY), SCHWIETERS, KUSZEWSKI, REMARK 3 TJANDRA AND CLORE (X-PLOR_NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NBK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000104662. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.2 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 2 MM REMARK 210 DTT, 50 MM SODIUM CHLORIDE, 0.1 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 20 MM POTASSIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.1 % SODIUM REMARK 210 AZIDE, 2 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 2D 1H-13C HSQC ALIPHATIC; 2D 1H- REMARK 210 13C HSQC AROMATIC; 3D HN(CA)CO; REMARK 210 3D HALF-FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 700 MHZ; 850 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, NMRPIPE, TOPSPIN, TALOS, REMARK 210 PROCHECKNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 23 -63.62 -106.64 REMARK 500 1 PRO A 77 88.93 -42.32 REMARK 500 1 ASP A 78 -42.22 168.95 REMARK 500 1 CYS A 80 77.07 170.15 REMARK 500 1 SER A 102 -0.60 59.47 REMARK 500 1 MET A 109 62.88 -69.08 REMARK 500 1 GLU B 941 70.90 48.93 REMARK 500 1 PRO B 945 -174.40 -61.58 REMARK 500 1 ASP B 952 80.82 -60.92 REMARK 500 2 TYR A 22 70.23 -118.94 REMARK 500 2 SER A 55 26.27 82.42 REMARK 500 2 ASP A 78 -12.85 69.04 REMARK 500 2 CYS A 80 101.62 174.77 REMARK 500 2 SER A 102 25.30 -156.97 REMARK 500 2 GLN A 110 2.90 -65.28 REMARK 500 2 LYS A 113 -71.64 -63.42 REMARK 500 2 THR A 114 27.21 44.06 REMARK 500 2 PRO B 945 -178.11 -69.52 REMARK 500 2 ASP B 952 80.12 -61.98 REMARK 500 3 ASP A 78 -17.92 72.48 REMARK 500 3 LYS A 113 -172.37 177.84 REMARK 500 3 THR A 114 -18.40 -169.48 REMARK 500 3 ASP A 115 -2.17 61.29 REMARK 500 3 PRO B 942 -175.67 -47.57 REMARK 500 3 PRO B 945 -175.80 -48.43 REMARK 500 3 ASP B 952 81.30 -59.49 REMARK 500 4 THR A 52 -78.66 -69.93 REMARK 500 4 ASP A 53 -22.01 -179.37 REMARK 500 4 ASP A 78 -13.82 76.65 REMARK 500 4 CYS A 80 97.09 171.25 REMARK 500 4 SER A 102 11.85 -142.27 REMARK 500 4 THR A 114 40.86 22.02 REMARK 500 4 PRO B 945 -177.77 -48.72 REMARK 500 4 ASP B 952 80.45 -65.29 REMARK 500 5 LYS A 21 -80.74 -58.36 REMARK 500 5 LEU A 23 -62.91 -107.81 REMARK 500 5 PHE A 26 173.84 179.59 REMARK 500 5 SER A 55 14.46 -155.92 REMARK 500 5 LEU A 56 -151.89 54.94 REMARK 500 5 PRO A 77 64.73 -67.38 REMARK 500 5 ASP A 78 -19.87 163.57 REMARK 500 5 CYS A 80 99.17 165.86 REMARK 500 5 MET A 109 61.96 -64.84 REMARK 500 5 PRO B 945 -176.57 -69.01 REMARK 500 5 ASP B 952 81.11 -58.02 REMARK 500 6 PRO A 77 82.31 -44.15 REMARK 500 6 ASP A 78 -24.02 163.94 REMARK 500 6 CYS A 80 96.71 161.78 REMARK 500 6 LYS A 113 97.62 -69.92 REMARK 500 6 PRO B 942 170.35 -46.69 REMARK 500 REMARK 500 THIS ENTRY HAS 84 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25979 RELATED DB: BMRB DBREF 2NBK A 20 130 UNP Q16186 ADRM1_HUMAN 20 130 DBREF 2NBK B 940 953 UNP Q99460 PSMD1_HUMAN 940 953 SEQRES 1 A 111 ASN LYS TYR LEU VAL GLU PHE ARG ALA GLY LYS MET SER SEQRES 2 A 111 LEU LYS GLY THR THR VAL THR PRO ASP LYS ARG LYS GLY SEQRES 3 A 111 LEU VAL TYR ILE GLN GLN THR ASP ASP SER LEU ILE HIS SEQRES 4 A 111 PHE CYS TRP LYS ASP ARG THR SER GLY ASN VAL GLU ASP SEQRES 5 A 111 ASP LEU ILE ILE PHE PRO ASP ASP CYS GLU PHE LYS ARG SEQRES 6 A 111 VAL PRO GLN CYS PRO SER GLY ARG VAL TYR VAL LEU LYS SEQRES 7 A 111 PHE LYS ALA GLY SER LYS ARG LEU PHE PHE TRP MET GLN SEQRES 8 A 111 GLU PRO LYS THR ASP GLN ASP GLU GLU HIS CYS ARG LYS SEQRES 9 A 111 VAL ASN GLU TYR LEU ASN ASN SEQRES 1 B 14 GLN GLU PRO GLU PRO PRO GLU PRO PHE GLU TYR ILE ASP SEQRES 2 B 14 ASP HELIX 1 1 PRO A 112 ASP A 115 5 4 HELIX 2 2 GLN A 116 ASN A 129 1 14 SHEET 1 A 5 THR A 37 PRO A 40 0 SHEET 2 A 5 VAL A 24 LYS A 34 -1 N SER A 32 O THR A 39 SHEET 3 A 5 GLY A 45 GLN A 51 -1 O ILE A 49 N VAL A 24 SHEET 4 A 5 ILE A 57 ASP A 63 -1 O HIS A 58 N GLN A 50 SHEET 5 A 5 VAL A 69 ILE A 75 -1 O ASP A 71 N TRP A 61 SHEET 1 B 5 THR A 37 PRO A 40 0 SHEET 2 B 5 VAL A 24 LYS A 34 -1 N SER A 32 O THR A 39 SHEET 3 B 5 ARG A 104 TRP A 108 -1 O TRP A 108 N GLY A 29 SHEET 4 B 5 GLY A 91 LYS A 97 -1 N LEU A 96 O LEU A 105 SHEET 5 B 5 GLU A 81 CYS A 88 -1 N GLU A 81 O LYS A 97 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1