data_2NCR # _entry.id 2NCR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104701 RCSB ? ? 2NCR PDB pdb_00002ncr 10.2210/pdb2ncr/pdb 26033 BMRB ? ? D_1000104701 WWPDB ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2ncq PDB . unspecified 26033 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2NCR _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2016-04-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kumar, A.' 1 'Mishra, S.K.' 2 # _citation.id primary _citation.title ;Structural insights reveal the dynamics of the repeating r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS) ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mishra, S.K.' 1 ? primary 'Kumar, A.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "RNA_(5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')" _entity.formula_weight 2901.799 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CCGCGGCGG _entity_poly.pdbx_seq_one_letter_code_can CCGCGGCGG _entity_poly.pdbx_strand_id S,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 C n 1 3 G n 1 4 C n 1 5 G n 1 6 G n 1 7 C n 1 8 G n 1 9 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2NCR _struct_ref.pdbx_db_accession 2NCR _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NCR S 1 ? 9 ? 2NCR 1 ? 9 ? 1 9 2 1 2NCR A 1 ? 9 ? 2NCR 1 ? 9 ? 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 # _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.solution_id 1 _pdbx_nmr_exptl.type '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K _pdbx_nmr_exptl_sample_conditions.label ? _pdbx_nmr_exptl_sample_conditions.pH_units ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? # _pdbx_nmr_sample_details.contents ;1.5 mM RNA (5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')-1, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label ? _pdbx_nmr_sample_details.type ? _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.field_strength 400 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2NCR _pdbx_nmr_refine.method 'DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2NCR _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2NCR _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Goddard 'chemical shift assignment' Sparky ? 1 'Bruker Biospin' 'chemical shift calculation' TopSpin ? 2 'Accelrys Software Inc.' 'geometry optimization' Discover ? 3 'Accelrys Software Inc.' refinement Discover ? 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2NCR _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2NCR _struct.title 'Structural insight for dynamics of r(CGG) motif RNA found in Fragile X syndrome/ Fragile X tremor ataxia at 25 degree C' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NCR _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'r(CGG), RNA, Fragile- X syndrome, Fragile-X tremor ataxia' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 B G 9 N1 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 B G 9 O6 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 B G 9 N2 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 8 N1 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 8 O6 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 8 N2 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 7 N3 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 7 O2 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 7 N4 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 6 N1 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 6 O6 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 6 N2 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N1 ? ? ? 1_555 B G 5 O6 ? ? S G 5 A G 5 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 4 N3 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 B C 4 O2 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 B C 4 N4 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 3 N1 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 3 O6 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 3 N2 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 2 N3 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 2 O2 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 2 N4 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 1 N3 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 B C 1 O2 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 B C 1 N4 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2NCR _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C S . n A 1 2 C 2 2 2 C C S . n A 1 3 G 3 3 3 G G S . n A 1 4 C 4 4 4 C C S . n A 1 5 G 5 5 5 G G S . n A 1 6 G 6 6 6 G G S . n A 1 7 C 7 7 7 C C S . n A 1 8 G 8 8 8 G G S . n A 1 9 G 9 9 9 G G S . n B 1 1 C 1 1 1 C C A . n B 1 2 C 2 2 2 C C A . n B 1 3 G 3 3 3 G G A . n B 1 4 C 4 4 4 C C A . n B 1 5 G 5 5 5 G G A . n B 1 6 G 6 6 6 G G A . n B 1 7 C 7 7 7 C C A . n B 1 8 G 8 8 8 G G A . n B 1 9 G 9 9 9 G G A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-19 2 'Structure model' 1 1 2021-07-07 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Experimental preparation' 4 2 'Structure model' 'Refinement description' 5 3 'Structure model' 'Database references' 6 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' ndb_struct_conf_na 2 2 'Structure model' pdbx_nmr_exptl_sample 3 2 'Structure model' pdbx_nmr_refine 4 2 'Structure model' pdbx_nmr_sample_details 5 2 'Structure model' pdbx_nmr_software 6 2 'Structure model' pdbx_nmr_spectrometer 7 3 'Structure model' database_2 8 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_nmr_exptl_sample.isotopic_labeling' 2 2 'Structure model' '_pdbx_nmr_refine.software_ordinal' 3 2 'Structure model' '_pdbx_nmr_sample_details.contents' 4 2 'Structure model' '_pdbx_nmr_software.authors' 5 2 'Structure model' '_pdbx_nmr_software.name' 6 2 'Structure model' '_pdbx_nmr_spectrometer.manufacturer' 7 2 'Structure model' '_pdbx_nmr_spectrometer.model' 8 2 'Structure model' '_pdbx_nmr_spectrometer.type' 9 3 'Structure model' '_database_2.pdbx_DOI' 10 3 'Structure model' '_database_2.pdbx_database_accession' 11 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_exptl_sample.component ;RNA (5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')-1 ; _pdbx_nmr_exptl_sample.concentration 1.5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' _pdbx_nmr_exptl_sample.solution_id 1 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P S C 1 ? ? "O5'" S C 1 ? ? 1.488 1.593 -0.105 0.010 N 2 1 N1 S C 1 ? ? C6 S C 1 ? ? 1.308 1.367 -0.059 0.006 N 3 1 C4 S C 1 ? ? C5 S C 1 ? ? 1.365 1.425 -0.060 0.008 N 4 1 C5 S C 1 ? ? C6 S C 1 ? ? 1.412 1.339 0.073 0.008 N 5 1 P S G 3 ? ? "O5'" S G 3 ? ? 1.513 1.593 -0.080 0.010 N 6 1 N7 S G 3 ? ? C8 S G 3 ? ? 1.347 1.305 0.042 0.006 N 7 1 P S C 4 ? ? "O5'" S C 4 ? ? 1.527 1.593 -0.066 0.010 N 8 1 N1 S C 4 ? ? C6 S C 4 ? ? 1.301 1.367 -0.066 0.006 N 9 1 C2 S C 4 ? ? N3 S C 4 ? ? 1.403 1.353 0.050 0.008 N 10 1 N3 S C 4 ? ? C4 S C 4 ? ? 1.287 1.335 -0.048 0.007 N 11 1 C4 S C 4 ? ? C5 S C 4 ? ? 1.347 1.425 -0.078 0.008 N 12 1 "O4'" S G 5 ? ? "C4'" S G 5 ? ? 1.365 1.451 -0.086 0.013 N 13 1 N3 S G 5 ? ? C4 S G 5 ? ? 1.297 1.350 -0.053 0.007 N 14 1 C4 S G 5 ? ? C5 S G 5 ? ? 1.424 1.379 0.045 0.007 N 15 1 "C5'" S G 6 ? ? "C4'" S G 6 ? ? 1.457 1.508 -0.051 0.007 N 16 1 "C3'" S G 6 ? ? "C2'" S G 6 ? ? 1.433 1.523 -0.090 0.011 N 17 1 C4 S C 7 ? ? N4 S C 7 ? ? 1.399 1.335 0.064 0.009 N 18 1 N1 S C 7 ? ? C6 S C 7 ? ? 1.315 1.367 -0.052 0.006 N 19 1 "O3'" S C 7 ? ? P S G 8 ? ? 1.503 1.607 -0.104 0.012 Y 20 1 P S G 8 ? ? "O5'" S G 8 ? ? 1.526 1.593 -0.067 0.010 N 21 1 C8 S G 8 ? ? N9 S G 8 ? ? 1.325 1.374 -0.049 0.007 N 22 1 N1 S G 9 ? ? C2 S G 9 ? ? 1.322 1.373 -0.051 0.008 N 23 1 C2 S G 9 ? ? N3 S G 9 ? ? 1.372 1.323 0.049 0.008 N 24 1 C4 S G 9 ? ? C5 S G 9 ? ? 1.433 1.379 0.054 0.007 N 25 1 N7 S G 9 ? ? C8 S G 9 ? ? 1.348 1.305 0.043 0.006 N 26 1 P A C 1 ? ? "O5'" A C 1 ? ? 1.514 1.593 -0.079 0.010 N 27 1 C2 A C 1 ? ? N3 A C 1 ? ? 1.402 1.353 0.049 0.008 N 28 1 C4 A C 1 ? ? C5 A C 1 ? ? 1.355 1.425 -0.070 0.008 N 29 1 "O5'" A C 2 ? ? "C5'" A C 2 ? ? 1.354 1.420 -0.066 0.009 N 30 1 N1 A C 2 ? ? C2 A C 2 ? ? 1.317 1.397 -0.080 0.010 N 31 1 C2 A C 2 ? ? N3 A C 2 ? ? 1.414 1.353 0.061 0.008 N 32 1 P A G 3 ? ? "O5'" A G 3 ? ? 1.521 1.593 -0.072 0.010 N 33 1 "C5'" A G 3 ? ? "C4'" A G 3 ? ? 1.585 1.509 0.076 0.012 N 34 1 N1 A G 3 ? ? C2 A G 3 ? ? 1.296 1.373 -0.077 0.008 N 35 1 C4 A G 3 ? ? C5 A G 3 ? ? 1.453 1.379 0.074 0.007 N 36 1 N7 A G 3 ? ? C8 A G 3 ? ? 1.369 1.305 0.064 0.006 N 37 1 "O3'" A G 3 ? ? P A C 4 ? ? 1.491 1.607 -0.116 0.012 Y 38 1 C4 A C 4 ? ? C5 A C 4 ? ? 1.375 1.425 -0.050 0.008 N 39 1 "O4'" A G 5 ? ? "C4'" A G 5 ? ? 1.358 1.451 -0.093 0.013 N 40 1 N7 A G 5 ? ? C8 A G 5 ? ? 1.372 1.305 0.067 0.006 N 41 1 N3 A G 6 ? ? C4 A G 6 ? ? 1.415 1.350 0.065 0.007 N 42 1 N7 A G 6 ? ? C8 A G 6 ? ? 1.395 1.305 0.090 0.006 N 43 1 "O4'" A C 7 ? ? "C4'" A C 7 ? ? 1.371 1.451 -0.080 0.013 N 44 1 N1 A C 7 ? ? C6 A C 7 ? ? 1.298 1.367 -0.069 0.006 N 45 1 C2 A C 7 ? ? N3 A C 7 ? ? 1.403 1.353 0.050 0.008 N 46 1 C4 A C 7 ? ? C5 A C 7 ? ? 1.365 1.425 -0.060 0.008 N 47 1 C5 A C 7 ? ? C6 A C 7 ? ? 1.389 1.339 0.050 0.008 N 48 1 "O3'" A C 7 ? ? P A G 8 ? ? 1.484 1.607 -0.123 0.012 Y 49 1 N1 A G 8 ? ? C2 A G 8 ? ? 1.319 1.373 -0.054 0.008 N 50 1 C5 A G 8 ? ? N7 A G 8 ? ? 1.335 1.388 -0.053 0.006 N 51 1 C4 A G 9 ? ? C5 A G 9 ? ? 1.446 1.379 0.067 0.007 N 52 1 N7 A G 9 ? ? C8 A G 9 ? ? 1.350 1.305 0.045 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 S C 1 ? ? P S C 1 ? ? OP2 S C 1 ? ? 107.85 119.60 -11.75 1.50 N 2 1 "O4'" S C 1 ? ? "C1'" S C 1 ? ? N1 S C 1 ? ? 115.56 108.50 7.06 0.70 N 3 1 N1 S C 1 ? ? C2 S C 1 ? ? N3 S C 1 ? ? 114.46 119.20 -4.74 0.70 N 4 1 C2 S C 1 ? ? N3 S C 1 ? ? C4 S C 1 ? ? 124.59 119.90 4.69 0.50 N 5 1 C5 S C 1 ? ? C6 S C 1 ? ? N1 S C 1 ? ? 125.25 121.00 4.25 0.50 N 6 1 N1 S C 1 ? ? C2 S C 1 ? ? O2 S C 1 ? ? 122.55 118.90 3.65 0.60 N 7 1 OP1 S C 2 ? ? P S C 2 ? ? OP2 S C 2 ? ? 108.14 119.60 -11.46 1.50 N 8 1 "C5'" S C 2 ? ? "C4'" S C 2 ? ? "O4'" S C 2 ? ? 117.20 109.80 7.40 0.90 N 9 1 "C1'" S C 2 ? ? "O4'" S C 2 ? ? "C4'" S C 2 ? ? 116.39 109.90 6.49 0.80 N 10 1 "O4'" S C 2 ? ? "C1'" S C 2 ? ? "C2'" S C 2 ? ? 99.44 105.80 -6.36 1.00 N 11 1 C4 S C 2 ? ? C5 S C 2 ? ? C6 S C 2 ? ? 114.35 117.40 -3.05 0.50 N 12 1 C2 S G 3 ? ? N3 S G 3 ? ? C4 S G 3 ? ? 115.66 111.90 3.76 0.50 N 13 1 N3 S G 3 ? ? C4 S G 3 ? ? C5 S G 3 ? ? 123.35 128.60 -5.25 0.50 N 14 1 N3 S G 3 ? ? C4 S G 3 ? ? N9 S G 3 ? ? 131.13 126.00 5.13 0.60 N 15 1 N1 S G 3 ? ? C6 S G 3 ? ? O6 S G 3 ? ? 123.63 119.90 3.73 0.60 N 16 1 C5 S G 3 ? ? C6 S G 3 ? ? O6 S G 3 ? ? 124.67 128.60 -3.93 0.60 N 17 1 N1 S C 4 ? ? C2 S C 4 ? ? O2 S C 4 ? ? 126.34 118.90 7.44 0.60 N 18 1 "O3'" S C 4 ? ? P S G 5 ? ? "O5'" S G 5 ? ? 115.42 104.00 11.42 1.90 Y 19 1 "O4'" S G 5 ? ? "C1'" S G 5 ? ? N9 S G 5 ? ? 103.38 108.20 -4.82 0.80 N 20 1 C2 S G 5 ? ? N3 S G 5 ? ? C4 S G 5 ? ? 119.24 111.90 7.34 0.50 N 21 1 N3 S G 5 ? ? C4 S G 5 ? ? C5 S G 5 ? ? 122.69 128.60 -5.91 0.50 N 22 1 C4 S G 5 ? ? C5 S G 5 ? ? N7 S G 5 ? ? 107.18 110.80 -3.62 0.40 N 23 1 C8 S G 5 ? ? N9 S G 5 ? ? C4 S G 5 ? ? 103.49 106.40 -2.91 0.40 N 24 1 N9 S G 5 ? ? C4 S G 5 ? ? C5 S G 5 ? ? 108.11 105.40 2.71 0.40 N 25 1 N1 S G 5 ? ? C2 S G 5 ? ? N2 S G 5 ? ? 122.28 116.20 6.08 0.90 N 26 1 C8 S G 5 ? ? N9 S G 5 ? ? "C1'" S G 5 ? ? 138.05 127.00 11.05 1.30 N 27 1 C4 S G 5 ? ? N9 S G 5 ? ? "C1'" S G 5 ? ? 118.32 126.50 -8.18 1.30 N 28 1 OP1 S G 6 ? ? P S G 6 ? ? OP2 S G 6 ? ? 109.32 119.60 -10.28 1.50 N 29 1 "O4'" S G 6 ? ? "C4'" S G 6 ? ? "C3'" S G 6 ? ? 96.92 104.00 -7.08 1.00 N 30 1 C2 S G 6 ? ? N3 S G 6 ? ? C4 S G 6 ? ? 116.45 111.90 4.55 0.50 N 31 1 N3 S G 6 ? ? C4 S G 6 ? ? C5 S G 6 ? ? 125.32 128.60 -3.28 0.50 N 32 1 C4 S G 6 ? ? C5 S G 6 ? ? N7 S G 6 ? ? 107.47 110.80 -3.33 0.40 N 33 1 N9 S G 6 ? ? C4 S G 6 ? ? C5 S G 6 ? ? 108.09 105.40 2.69 0.40 N 34 1 OP1 S C 7 ? ? P S C 7 ? ? OP2 S C 7 ? ? 107.53 119.60 -12.07 1.50 N 35 1 "C5'" S C 7 ? ? "C4'" S C 7 ? ? "C3'" S C 7 ? ? 105.51 115.20 -9.69 1.40 N 36 1 "C5'" S C 7 ? ? "C4'" S C 7 ? ? "O4'" S C 7 ? ? 116.69 109.80 6.89 0.90 N 37 1 C5 S C 7 ? ? C6 S C 7 ? ? N1 S C 7 ? ? 124.13 121.00 3.13 0.50 N 38 1 C2 S G 8 ? ? N3 S G 8 ? ? C4 S G 8 ? ? 115.60 111.90 3.70 0.50 N 39 1 C4 S G 8 ? ? C5 S G 8 ? ? N7 S G 8 ? ? 107.60 110.80 -3.20 0.40 N 40 1 N9 S G 8 ? ? C4 S G 8 ? ? C5 S G 8 ? ? 108.58 105.40 3.18 0.40 N 41 1 "O5'" S G 9 ? ? "C5'" S G 9 ? ? "C4'" S G 9 ? ? 103.47 109.40 -5.93 0.80 N 42 1 "C5'" S G 9 ? ? "C4'" S G 9 ? ? "O4'" S G 9 ? ? 117.09 109.80 7.29 0.90 N 43 1 N3 S G 9 ? ? C4 S G 9 ? ? C5 S G 9 ? ? 124.45 128.60 -4.15 0.50 N 44 1 N1 S G 9 ? ? C2 S G 9 ? ? N2 S G 9 ? ? 122.37 116.20 6.17 0.90 N 45 1 N3 S G 9 ? ? C2 S G 9 ? ? N2 S G 9 ? ? 112.49 119.90 -7.41 0.70 N 46 1 OP1 A C 1 ? ? P A C 1 ? ? OP2 A C 1 ? ? 107.16 119.60 -12.44 1.50 N 47 1 N3 A C 1 ? ? C4 A C 1 ? ? C5 A C 1 ? ? 118.89 121.90 -3.01 0.40 N 48 1 C4 A C 1 ? ? C5 A C 1 ? ? C6 A C 1 ? ? 120.61 117.40 3.21 0.50 N 49 1 N1 A C 1 ? ? C2 A C 1 ? ? O2 A C 1 ? ? 125.89 118.90 6.99 0.60 N 50 1 "O3'" A C 1 ? ? P A C 2 ? ? "O5'" A C 2 ? ? 115.79 104.00 11.79 1.90 Y 51 1 OP1 A C 2 ? ? P A C 2 ? ? OP2 A C 2 ? ? 109.46 119.60 -10.14 1.50 N 52 1 "C5'" A C 2 ? ? "C4'" A C 2 ? ? "O4'" A C 2 ? ? 117.95 109.80 8.15 0.90 N 53 1 OP1 A G 3 ? ? P A G 3 ? ? OP2 A G 3 ? ? 105.92 119.60 -13.68 1.50 N 54 1 C2 A G 3 ? ? N3 A G 3 ? ? C4 A G 3 ? ? 117.95 111.90 6.05 0.50 N 55 1 N3 A G 3 ? ? C4 A G 3 ? ? C5 A G 3 ? ? 120.30 128.60 -8.30 0.50 N 56 1 C5 A G 3 ? ? C6 A G 3 ? ? N1 A G 3 ? ? 114.92 111.50 3.42 0.50 N 57 1 N3 A G 3 ? ? C4 A G 3 ? ? N9 A G 3 ? ? 132.70 126.00 6.70 0.60 N 58 1 N1 A G 3 ? ? C2 A G 3 ? ? N2 A G 3 ? ? 121.67 116.20 5.47 0.90 N 59 1 N3 A G 3 ? ? C2 A G 3 ? ? N2 A G 3 ? ? 113.43 119.90 -6.47 0.70 N 60 1 C5 A G 3 ? ? C6 A G 3 ? ? O6 A G 3 ? ? 121.81 128.60 -6.79 0.60 N 61 1 OP1 A C 4 ? ? P A C 4 ? ? OP2 A C 4 ? ? 108.45 119.60 -11.15 1.50 N 62 1 N1 A C 4 ? ? C2 A C 4 ? ? O2 A C 4 ? ? 123.24 118.90 4.34 0.60 N 63 1 OP1 A G 5 ? ? P A G 5 ? ? OP2 A G 5 ? ? 104.38 119.60 -15.22 1.50 N 64 1 "C5'" A G 5 ? ? "C4'" A G 5 ? ? "O4'" A G 5 ? ? 119.85 109.80 10.05 0.90 N 65 1 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 112.97 108.50 4.47 0.70 N 66 1 C4 A G 5 ? ? C5 A G 5 ? ? N7 A G 5 ? ? 108.06 110.80 -2.74 0.40 N 67 1 N9 A G 5 ? ? C4 A G 5 ? ? C5 A G 5 ? ? 108.93 105.40 3.53 0.40 N 68 1 N3 A G 6 ? ? C4 A G 6 ? ? C5 A G 6 ? ? 123.68 128.60 -4.92 0.50 N 69 1 C5 A G 6 ? ? C6 A G 6 ? ? N1 A G 6 ? ? 115.62 111.50 4.12 0.50 N 70 1 C4 A G 6 ? ? C5 A G 6 ? ? N7 A G 6 ? ? 107.94 110.80 -2.86 0.40 N 71 1 N9 A G 6 ? ? C4 A G 6 ? ? C5 A G 6 ? ? 108.77 105.40 3.37 0.40 N 72 1 N3 A G 6 ? ? C2 A G 6 ? ? N2 A G 6 ? ? 113.35 119.90 -6.55 0.70 N 73 1 N1 A G 6 ? ? C6 A G 6 ? ? O6 A G 6 ? ? 115.44 119.90 -4.46 0.60 N 74 1 OP1 A G 8 ? ? P A G 8 ? ? OP2 A G 8 ? ? 108.64 119.60 -10.96 1.50 N 75 1 "C5'" A G 8 ? ? "C4'" A G 8 ? ? "O4'" A G 8 ? ? 116.19 109.80 6.39 0.90 N 76 1 C2 A G 8 ? ? N3 A G 8 ? ? C4 A G 8 ? ? 117.48 111.90 5.58 0.50 N 77 1 N3 A G 8 ? ? C4 A G 8 ? ? C5 A G 8 ? ? 123.50 128.60 -5.10 0.50 N 78 1 C5 A G 8 ? ? C6 A G 8 ? ? N1 A G 8 ? ? 115.83 111.50 4.33 0.50 N 79 1 C4 A G 8 ? ? C5 A G 8 ? ? N7 A G 8 ? ? 107.96 110.80 -2.84 0.40 N 80 1 C5 A G 8 ? ? N7 A G 8 ? ? C8 A G 8 ? ? 109.10 104.30 4.80 0.50 N 81 1 N3 A G 8 ? ? C4 A G 8 ? ? N9 A G 8 ? ? 130.19 126.00 4.19 0.60 N 82 1 C6 A G 8 ? ? C5 A G 8 ? ? N7 A G 8 ? ? 135.57 130.40 5.17 0.60 N 83 1 N1 A G 8 ? ? C2 A G 8 ? ? N2 A G 8 ? ? 123.64 116.20 7.44 0.90 N 84 1 N3 A G 8 ? ? C2 A G 8 ? ? N2 A G 8 ? ? 113.27 119.90 -6.63 0.70 N 85 1 C5 A G 8 ? ? C6 A G 8 ? ? O6 A G 8 ? ? 123.03 128.60 -5.57 0.60 N 86 1 "O3'" A G 8 ? ? P A G 9 ? ? "O5'" A G 9 ? ? 117.53 104.00 13.53 1.90 Y 87 1 OP1 A G 9 ? ? P A G 9 ? ? OP2 A G 9 ? ? 107.43 119.60 -12.17 1.50 N 88 1 C2 A G 9 ? ? N3 A G 9 ? ? C4 A G 9 ? ? 116.46 111.90 4.56 0.50 N 89 1 N3 A G 9 ? ? C4 A G 9 ? ? C5 A G 9 ? ? 121.81 128.60 -6.79 0.50 N 90 1 C4 A G 9 ? ? C5 A G 9 ? ? N7 A G 9 ? ? 106.24 110.80 -4.56 0.40 N 91 1 N3 A G 9 ? ? C4 A G 9 ? ? N9 A G 9 ? ? 130.66 126.00 4.66 0.60 N 92 1 N3 A G 9 ? ? C2 A G 9 ? ? N2 A G 9 ? ? 113.29 119.90 -6.61 0.70 N # _ndb_struct_conf_na.entry_id 2NCR _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 9 1_555 0.122 -0.077 -0.326 -1.128 -2.413 0.545 1 S_C1:G9_A S 1 ? A 9 ? 19 1 1 A C 2 1_555 B G 8 1_555 0.091 -0.157 -0.280 0.393 -4.309 -0.252 2 S_C2:G8_A S 2 ? A 8 ? 19 1 1 A G 3 1_555 B C 7 1_555 -0.063 -0.126 -0.143 -2.694 -0.162 -1.100 3 S_G3:C7_A S 3 ? A 7 ? 19 1 1 A C 4 1_555 B G 6 1_555 0.251 -0.099 -0.225 1.844 -2.301 -0.804 4 S_C4:G6_A S 4 ? A 6 ? 19 1 1 A G 5 1_555 B G 5 1_555 3.650 0.869 -0.636 -2.566 -34.048 -34.102 5 S_G5:G5_A S 5 ? A 5 ? ? 1 1 A G 6 1_555 B C 4 1_555 -0.240 -0.117 -0.149 -2.422 -3.122 -0.594 6 S_G6:C4_A S 6 ? A 4 ? 19 1 1 A C 7 1_555 B G 3 1_555 0.304 -0.149 -0.180 -0.486 -1.004 1.089 7 S_C7:G3_A S 7 ? A 3 ? 19 1 1 A G 8 1_555 B C 2 1_555 -0.103 -0.194 -0.251 -2.787 -2.739 -1.074 8 S_G8:C2_A S 8 ? A 2 ? 19 1 1 A G 9 1_555 B C 1 1_555 -0.055 -0.095 -0.286 3.268 -2.607 -2.088 9 S_G9:C1_A S 9 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 9 1_555 A C 2 1_555 B G 8 1_555 0.026 -1.332 3.331 0.923 9.372 31.663 -3.877 0.105 2.831 16.720 -1.646 33.000 1 SS_C1C2:G8G9_AA S 1 ? A 9 ? S 2 ? A 8 ? 1 A C 2 1_555 B G 8 1_555 A G 3 1_555 B C 7 1_555 0.030 -1.356 3.358 -0.548 11.301 31.055 -4.224 -0.142 2.711 20.282 0.984 33.004 2 SS_C2G3:C7G8_AA S 2 ? A 8 ? S 3 ? A 7 ? 1 A G 3 1_555 B C 7 1_555 A C 4 1_555 B G 6 1_555 0.064 -1.329 3.219 1.254 6.052 32.670 -3.284 0.087 2.932 10.639 -2.204 33.234 3 SS_G3C4:G6C7_AA S 3 ? A 7 ? S 4 ? A 6 ? 1 A C 4 1_555 B G 6 1_555 A G 5 1_555 B G 5 1_555 -0.986 -1.352 3.809 5.442 9.996 41.198 -2.964 1.957 3.260 13.889 -7.561 42.676 4 SS_C4G5:G5G6_AA S 4 ? A 6 ? S 5 ? A 5 ? 1 A G 5 1_555 B G 5 1_555 A G 6 1_555 B C 4 1_555 0.797 -1.821 3.092 -0.582 13.412 18.580 -8.246 -2.166 1.438 36.060 1.564 22.888 5 SS_G5G6:C4G5_AA S 5 ? A 5 ? S 6 ? A 4 ? 1 A G 6 1_555 B C 4 1_555 A C 7 1_555 B G 3 1_555 0.068 -1.264 3.305 -0.039 7.425 33.939 -3.222 -0.120 2.970 12.534 0.067 34.718 6 SS_G6C7:G3C4_AA S 6 ? A 4 ? S 7 ? A 3 ? 1 A C 7 1_555 B G 3 1_555 A G 8 1_555 B C 2 1_555 -0.144 -1.369 3.318 0.776 11.095 29.241 -4.523 0.406 2.631 21.043 -1.472 31.241 7 SS_C7G8:C2G3_AA S 7 ? A 3 ? S 8 ? A 2 ? 1 A G 8 1_555 B C 2 1_555 A G 9 1_555 B C 1 1_555 -0.051 -1.402 3.185 -0.589 8.968 32.017 -3.831 -0.001 2.704 15.873 1.042 33.222 8 SS_G8G9:C1C2_AA S 8 ? A 2 ? S 9 ? A 1 ? #