HEADER PLANT PROTEIN 17-JUL-16 2NDM TITLE NMR SOLUTION STRUCTURE OF PAWS DERIVED PEPTIDE 21 (PDP-21) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAWS DERIVED PEPTIDE 21; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ZINNIA HAAGEANA; SOURCE 4 ORGANISM_TAXID: 1525732; SOURCE 5 OTHER_DETAILS: ASSEMBLED BY FMOC SOLID PHASE PEPTIDE SYNTHESIS AND SOURCE 6 CYCLISED BY NATIVE CHEMICAL LIGATION. KEYWDS PDP, PLANT PEPTIDE, CYCLIC PEPTIDE, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.FRANKE,A.S.JAYASENA,M.F.FISHER,J.E.SWEDBERG,N.L.TAYLOR,J.S.MYLNE, AUTHOR 2 K.ROSENGREN REVDAT 3 14-JUN-23 2NDM 1 REMARK LINK REVDAT 2 07-DEC-16 2NDM 1 JRNL REVDAT 1 24-AUG-16 2NDM 0 JRNL AUTH B.FRANKE,A.S.JAYASENA,M.F.FISHER,J.E.SWEDBERG,N.L.TAYLOR, JRNL AUTH 2 J.S.MYLNE,K.J.ROSENGREN JRNL TITL DIVERSE CYCLIC SEED PEPTIDES IN THE MEXICAN ZINNIA (ZINNIA JRNL TITL 2 HAAGEANA). JRNL REF BIOPOLYMERS V. 106 806 2016 JRNL REFN ISSN 0006-3525 JRNL PMID 27352920 JRNL DOI 10.1002/BIP.22901 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CYANA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TORSION ANGLE DYNAMICS REMARK 4 REMARK 4 2NDM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000104732. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283 REMARK 210 PH : 5.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2 MG/ML PAWS DERIVED PEPTIDE 21 REMARK 210 (PDP-21), 90% H2O/10% D2O; 2 MG/ REMARK 210 ML PAWS DERIVED PEPTIDE 21 (PDP- REMARK 210 21), 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 2D DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CCPNMR, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH BEST MOLPROBITY REMARK 210 SCORE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 9 77.62 57.69 REMARK 500 3 SER A 9 88.24 51.12 REMARK 500 4 SER A 9 105.24 63.76 REMARK 500 5 SER A 9 105.40 64.01 REMARK 500 7 SER A 9 72.07 50.36 REMARK 500 8 SER A 9 71.55 47.89 REMARK 500 9 SER A 9 104.86 63.78 REMARK 500 13 SER A 9 68.04 64.07 REMARK 500 14 SER A 9 91.02 61.46 REMARK 500 20 SER A 9 90.25 58.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 26065 RELATED DB: BMRB REMARK 900 RELATED ID: 2NDL RELATED DB: PDB REMARK 900 RELATED ID: 2NDN RELATED DB: PDB DBREF 2NDM A 1 13 PDB 2NDM 2NDM 1 13 SEQRES 1 A 13 GLY ARG PRO CYS TYR THR LEU GLN SER CYS PHE PRO ASP SSBOND 1 CYS A 4 CYS A 10 1555 1555 2.12 LINK N GLY A 1 C ASP A 13 1555 1555 1.34 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1