data_2NL8 # _entry.id 2NL8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2NL8 pdb_00002nl8 10.2210/pdb2nl8/pdb NDB PD0883 ? ? RCSB RCSB040000 ? ? WWPDB D_1000040000 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-12 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-12-27 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 2NL8 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.recvd_initial_deposition_date 2006-10-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2IPR . unspecified PDB 2ITJ . unspecified PDB 2ITL . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martynowski, D.' 1 'Bochkareva, E.' 2 'Bochkarev, A.' 3 # _citation.id primary _citation.title 'Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 25 _citation.page_first 5961 _citation.page_last 5969 _citation.year 2006 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17139255 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7601452 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bochkareva, E.' 1 ? primary 'Martynowski, D.' 2 ? primary 'Seitova, A.' 3 ? primary 'Bochkarev, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '18-nt PEN element of the SV40 DNA origin' 5477.542 1 ? ? ? 'P2 pentamer replaced with ATCAT' 2 polymer man 'large T antigen' 15364.638 1 ? CYS216SER 'Origin binding domain (residues 131-259)' ? 3 water nat water 18.015 82 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DA)(DT)(DC)(DA)(DT)(DG)(DG)(DC)(DC)(DT)(DC)' CGAGGCCATCATGGCCTC W ? 2 'polypeptide(L)' no no ;GSHMKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVS AINNYAQKLSTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNP ; ;GSHMKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVS AINNYAQKLSTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNP ; A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DG n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DA n 1 9 DT n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DC n 1 16 DC n 1 17 DT n 1 18 DC n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 MET n 2 5 LYS n 2 6 VAL n 2 7 GLU n 2 8 ASP n 2 9 PRO n 2 10 LYS n 2 11 ASP n 2 12 PHE n 2 13 PRO n 2 14 SER n 2 15 GLU n 2 16 LEU n 2 17 LEU n 2 18 SER n 2 19 PHE n 2 20 LEU n 2 21 SER n 2 22 HIS n 2 23 ALA n 2 24 VAL n 2 25 PHE n 2 26 SER n 2 27 ASN n 2 28 ARG n 2 29 THR n 2 30 LEU n 2 31 ALA n 2 32 CYS n 2 33 PHE n 2 34 ALA n 2 35 ILE n 2 36 TYR n 2 37 THR n 2 38 THR n 2 39 LYS n 2 40 GLU n 2 41 LYS n 2 42 ALA n 2 43 ALA n 2 44 LEU n 2 45 LEU n 2 46 TYR n 2 47 LYS n 2 48 LYS n 2 49 ILE n 2 50 MET n 2 51 GLU n 2 52 LYS n 2 53 TYR n 2 54 SER n 2 55 VAL n 2 56 THR n 2 57 PHE n 2 58 ILE n 2 59 SER n 2 60 ARG n 2 61 HIS n 2 62 ASN n 2 63 SER n 2 64 TYR n 2 65 ASN n 2 66 HIS n 2 67 ASN n 2 68 ILE n 2 69 LEU n 2 70 PHE n 2 71 PHE n 2 72 LEU n 2 73 THR n 2 74 PRO n 2 75 HIS n 2 76 ARG n 2 77 HIS n 2 78 ARG n 2 79 VAL n 2 80 SER n 2 81 ALA n 2 82 ILE n 2 83 ASN n 2 84 ASN n 2 85 TYR n 2 86 ALA n 2 87 GLN n 2 88 LYS n 2 89 LEU n 2 90 SER n 2 91 THR n 2 92 PHE n 2 93 SER n 2 94 PHE n 2 95 LEU n 2 96 ILE n 2 97 CYS n 2 98 LYS n 2 99 GLY n 2 100 VAL n 2 101 ASN n 2 102 LYS n 2 103 GLU n 2 104 TYR n 2 105 LEU n 2 106 MET n 2 107 TYR n 2 108 SER n 2 109 ALA n 2 110 LEU n 2 111 THR n 2 112 ARG n 2 113 ASP n 2 114 PRO n 2 115 PHE n 2 116 SER n 2 117 VAL n 2 118 ILE n 2 119 GLU n 2 120 GLU n 2 121 SER n 2 122 LEU n 2 123 PRO n 2 124 GLY n 2 125 GLY n 2 126 LEU n 2 127 LYS n 2 128 GLU n 2 129 HIS n 2 130 ASP n 2 131 PHE n 2 132 ASN n 2 133 PRO n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Polyomavirus _entity_src_gen.pdbx_gene_src_gene 'large T antigen' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 776 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Simian virus 40' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10633 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 10 10 DC C W . n A 1 2 DG 2 11 11 DG G W . n A 1 3 DA 3 12 12 DA A W . n A 1 4 DG 4 13 13 DG G W . n A 1 5 DG 5 14 14 DG G W . n A 1 6 DC 6 15 15 DC C W . n A 1 7 DC 7 16 16 DC C W . n A 1 8 DA 8 17 17 DA A W . n A 1 9 DT 9 18 18 DT T W . n A 1 10 DC 10 19 19 DC C W . n A 1 11 DA 11 20 20 DA A W . n A 1 12 DT 12 21 21 DT T W . n A 1 13 DG 13 22 22 DG G W . n A 1 14 DG 14 23 23 DG G W . n A 1 15 DC 15 24 24 DC C W . n A 1 16 DC 16 25 25 DC C W . n A 1 17 DT 17 26 26 DT T W . n A 1 18 DC 18 27 27 DC C W . n B 2 1 GLY 1 127 ? ? ? A . n B 2 2 SER 2 128 ? ? ? A . n B 2 3 HIS 3 129 ? ? ? A . n B 2 4 MET 4 130 ? ? ? A . n B 2 5 LYS 5 131 ? ? ? A . n B 2 6 VAL 6 132 ? ? ? A . n B 2 7 GLU 7 133 133 GLU GLU A . n B 2 8 ASP 8 134 134 ASP ASP A . n B 2 9 PRO 9 135 135 PRO PRO A . n B 2 10 LYS 10 136 136 LYS LYS A . n B 2 11 ASP 11 137 137 ASP ASP A . n B 2 12 PHE 12 138 138 PHE PHE A . n B 2 13 PRO 13 139 139 PRO PRO A . n B 2 14 SER 14 140 140 SER SER A . n B 2 15 GLU 15 141 141 GLU GLU A . n B 2 16 LEU 16 142 142 LEU LEU A . n B 2 17 LEU 17 143 143 LEU LEU A . n B 2 18 SER 18 144 144 SER SER A . n B 2 19 PHE 19 145 145 PHE PHE A . n B 2 20 LEU 20 146 146 LEU LEU A . n B 2 21 SER 21 147 147 SER SER A . n B 2 22 HIS 22 148 148 HIS HIS A . n B 2 23 ALA 23 149 149 ALA ALA A . n B 2 24 VAL 24 150 150 VAL VAL A . n B 2 25 PHE 25 151 151 PHE PHE A . n B 2 26 SER 26 152 152 SER SER A . n B 2 27 ASN 27 153 153 ASN ASN A . n B 2 28 ARG 28 154 154 ARG ARG A . n B 2 29 THR 29 155 155 THR THR A . n B 2 30 LEU 30 156 156 LEU LEU A . n B 2 31 ALA 31 157 157 ALA ALA A . n B 2 32 CYS 32 158 158 CYS CYS A . n B 2 33 PHE 33 159 159 PHE PHE A . n B 2 34 ALA 34 160 160 ALA ALA A . n B 2 35 ILE 35 161 161 ILE ILE A . n B 2 36 TYR 36 162 162 TYR TYR A . n B 2 37 THR 37 163 163 THR THR A . n B 2 38 THR 38 164 164 THR THR A . n B 2 39 LYS 39 165 165 LYS LYS A . n B 2 40 GLU 40 166 166 GLU GLU A . n B 2 41 LYS 41 167 167 LYS LYS A . n B 2 42 ALA 42 168 168 ALA ALA A . n B 2 43 ALA 43 169 169 ALA ALA A . n B 2 44 LEU 44 170 170 LEU LEU A . n B 2 45 LEU 45 171 171 LEU LEU A . n B 2 46 TYR 46 172 172 TYR TYR A . n B 2 47 LYS 47 173 173 LYS LYS A . n B 2 48 LYS 48 174 174 LYS LYS A . n B 2 49 ILE 49 175 175 ILE ILE A . n B 2 50 MET 50 176 176 MET MET A . n B 2 51 GLU 51 177 177 GLU GLU A . n B 2 52 LYS 52 178 178 LYS LYS A . n B 2 53 TYR 53 179 179 TYR TYR A . n B 2 54 SER 54 180 180 SER SER A . n B 2 55 VAL 55 181 181 VAL VAL A . n B 2 56 THR 56 182 182 THR THR A . n B 2 57 PHE 57 183 183 PHE PHE A . n B 2 58 ILE 58 184 184 ILE ILE A . n B 2 59 SER 59 185 185 SER SER A . n B 2 60 ARG 60 186 186 ARG ARG A . n B 2 61 HIS 61 187 187 HIS HIS A . n B 2 62 ASN 62 188 188 ASN ASN A . n B 2 63 SER 63 189 189 SER SER A . n B 2 64 TYR 64 190 190 TYR TYR A . n B 2 65 ASN 65 191 191 ASN ASN A . n B 2 66 HIS 66 192 192 HIS HIS A . n B 2 67 ASN 67 193 193 ASN ASN A . n B 2 68 ILE 68 194 194 ILE ILE A . n B 2 69 LEU 69 195 195 LEU LEU A . n B 2 70 PHE 70 196 196 PHE PHE A . n B 2 71 PHE 71 197 197 PHE PHE A . n B 2 72 LEU 72 198 198 LEU LEU A . n B 2 73 THR 73 199 199 THR THR A . n B 2 74 PRO 74 200 200 PRO PRO A . n B 2 75 HIS 75 201 201 HIS HIS A . n B 2 76 ARG 76 202 202 ARG ARG A . n B 2 77 HIS 77 203 203 HIS HIS A . n B 2 78 ARG 78 204 204 ARG ARG A . n B 2 79 VAL 79 205 205 VAL VAL A . n B 2 80 SER 80 206 206 SER SER A . n B 2 81 ALA 81 207 207 ALA ALA A . n B 2 82 ILE 82 208 208 ILE ILE A . n B 2 83 ASN 83 209 209 ASN ASN A . n B 2 84 ASN 84 210 210 ASN ASN A . n B 2 85 TYR 85 211 211 TYR TYR A . n B 2 86 ALA 86 212 212 ALA ALA A . n B 2 87 GLN 87 213 213 GLN GLN A . n B 2 88 LYS 88 214 214 LYS LYS A . n B 2 89 LEU 89 215 215 LEU LEU A . n B 2 90 SER 90 216 216 SER SER A . n B 2 91 THR 91 217 217 THR THR A . n B 2 92 PHE 92 218 218 PHE PHE A . n B 2 93 SER 93 219 219 SER SER A . n B 2 94 PHE 94 220 220 PHE PHE A . n B 2 95 LEU 95 221 221 LEU LEU A . n B 2 96 ILE 96 222 222 ILE ILE A . n B 2 97 CYS 97 223 223 CYS CYS A . n B 2 98 LYS 98 224 224 LYS LYS A . n B 2 99 GLY 99 225 225 GLY GLY A . n B 2 100 VAL 100 226 226 VAL VAL A . n B 2 101 ASN 101 227 227 ASN ASN A . n B 2 102 LYS 102 228 228 LYS LYS A . n B 2 103 GLU 103 229 229 GLU GLU A . n B 2 104 TYR 104 230 230 TYR TYR A . n B 2 105 LEU 105 231 231 LEU LEU A . n B 2 106 MET 106 232 232 MET MET A . n B 2 107 TYR 107 233 233 TYR TYR A . n B 2 108 SER 108 234 234 SER SER A . n B 2 109 ALA 109 235 235 ALA ALA A . n B 2 110 LEU 110 236 236 LEU LEU A . n B 2 111 THR 111 237 237 THR THR A . n B 2 112 ARG 112 238 238 ARG ARG A . n B 2 113 ASP 113 239 239 ASP ASP A . n B 2 114 PRO 114 240 240 PRO PRO A . n B 2 115 PHE 115 241 241 PHE PHE A . n B 2 116 SER 116 242 242 SER SER A . n B 2 117 VAL 117 243 243 VAL VAL A . n B 2 118 ILE 118 244 244 ILE ILE A . n B 2 119 GLU 119 245 245 GLU GLU A . n B 2 120 GLU 120 246 246 GLU GLU A . n B 2 121 SER 121 247 247 SER SER A . n B 2 122 LEU 122 248 248 LEU LEU A . n B 2 123 PRO 123 249 249 PRO PRO A . n B 2 124 GLY 124 250 ? ? ? A . n B 2 125 GLY 125 251 ? ? ? A . n B 2 126 LEU 126 252 ? ? ? A . n B 2 127 LYS 127 253 ? ? ? A . n B 2 128 GLU 128 254 ? ? ? A . n B 2 129 HIS 129 255 ? ? ? A . n B 2 130 ASP 130 256 ? ? ? A . n B 2 131 PHE 131 257 ? ? ? A . n B 2 132 ASN 132 258 ? ? ? A . n B 2 133 PRO 133 259 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 28 1 HOH HOH W . C 3 HOH 2 29 6 HOH HOH W . C 3 HOH 3 30 7 HOH HOH W . C 3 HOH 4 31 9 HOH HOH W . C 3 HOH 5 32 10 HOH HOH W . C 3 HOH 6 33 11 HOH HOH W . C 3 HOH 7 34 13 HOH HOH W . C 3 HOH 8 35 17 HOH HOH W . C 3 HOH 9 36 25 HOH HOH W . C 3 HOH 10 37 26 HOH HOH W . C 3 HOH 11 38 29 HOH HOH W . C 3 HOH 12 39 32 HOH HOH W . C 3 HOH 13 40 33 HOH HOH W . C 3 HOH 14 41 34 HOH HOH W . C 3 HOH 15 42 37 HOH HOH W . C 3 HOH 16 43 48 HOH HOH W . C 3 HOH 17 44 49 HOH HOH W . C 3 HOH 18 45 53 HOH HOH W . C 3 HOH 19 46 55 HOH HOH W . C 3 HOH 20 47 59 HOH HOH W . C 3 HOH 21 48 64 HOH HOH W . C 3 HOH 22 49 65 HOH HOH W . C 3 HOH 23 50 67 HOH HOH W . C 3 HOH 24 51 75 HOH HOH W . C 3 HOH 25 52 77 HOH HOH W . C 3 HOH 26 53 79 HOH HOH W . D 3 HOH 1 2 2 HOH HOH A . D 3 HOH 2 3 3 HOH HOH A . D 3 HOH 3 4 4 HOH HOH A . D 3 HOH 4 5 5 HOH HOH A . D 3 HOH 5 8 8 HOH HOH A . D 3 HOH 6 12 12 HOH HOH A . D 3 HOH 7 14 14 HOH HOH A . D 3 HOH 8 15 15 HOH HOH A . D 3 HOH 9 16 16 HOH HOH A . D 3 HOH 10 18 18 HOH HOH A . D 3 HOH 11 19 19 HOH HOH A . D 3 HOH 12 20 20 HOH HOH A . D 3 HOH 13 21 21 HOH HOH A . D 3 HOH 14 22 22 HOH HOH A . D 3 HOH 15 23 23 HOH HOH A . D 3 HOH 16 24 24 HOH HOH A . D 3 HOH 17 27 27 HOH HOH A . D 3 HOH 18 28 28 HOH HOH A . D 3 HOH 19 30 30 HOH HOH A . D 3 HOH 20 31 31 HOH HOH A . D 3 HOH 21 35 35 HOH HOH A . D 3 HOH 22 36 36 HOH HOH A . D 3 HOH 23 38 38 HOH HOH A . D 3 HOH 24 39 39 HOH HOH A . D 3 HOH 25 40 40 HOH HOH A . D 3 HOH 26 41 41 HOH HOH A . D 3 HOH 27 42 42 HOH HOH A . D 3 HOH 28 43 43 HOH HOH A . D 3 HOH 29 44 44 HOH HOH A . D 3 HOH 30 45 45 HOH HOH A . D 3 HOH 31 46 46 HOH HOH A . D 3 HOH 32 47 47 HOH HOH A . D 3 HOH 33 50 50 HOH HOH A . D 3 HOH 34 51 51 HOH HOH A . D 3 HOH 35 52 52 HOH HOH A . D 3 HOH 36 54 54 HOH HOH A . D 3 HOH 37 56 56 HOH HOH A . D 3 HOH 38 57 57 HOH HOH A . D 3 HOH 39 58 58 HOH HOH A . D 3 HOH 40 60 60 HOH HOH A . D 3 HOH 41 61 61 HOH HOH A . D 3 HOH 42 62 62 HOH HOH A . D 3 HOH 43 63 63 HOH HOH A . D 3 HOH 44 66 66 HOH HOH A . D 3 HOH 45 68 68 HOH HOH A . D 3 HOH 46 69 69 HOH HOH A . D 3 HOH 47 70 70 HOH HOH A . D 3 HOH 48 71 71 HOH HOH A . D 3 HOH 49 72 72 HOH HOH A . D 3 HOH 50 73 73 HOH HOH A . D 3 HOH 51 74 74 HOH HOH A . D 3 HOH 52 76 76 HOH HOH A . D 3 HOH 53 78 78 HOH HOH A . D 3 HOH 54 80 80 HOH HOH A . D 3 HOH 55 81 81 HOH HOH A . D 3 HOH 56 82 82 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' '(MSC/RIGAKU)' ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 2NL8 _cell.length_a 43.870 _cell.length_b 43.870 _cell.length_c 238.308 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2NL8 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 2NL8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_percent_sol 54.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '20 mM NaAcetate, 20% PEG 3000 + 4% PEG 600, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 297K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 NaAcetate ? ? ? 1 2 1 'PEG 3000' ? ? ? 1 3 1 'PEG 600' ? ? ? 1 4 2 NaAcetate ? ? ? 1 5 2 'PEG 3000' ? ? ? 1 6 2 'PEG 600' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-05-26 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rigaku/MSC green optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2NL8 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 20. _reflns.number_all 11307 _reflns.number_obs 11307 _reflns.percent_possible_obs 94.00 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.044 _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.33 _reflns_shell.percent_possible_all 93. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.439 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2NL8 _refine.ls_number_reflns_obs 10057 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.92 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 94.61 _refine.ls_R_factor_obs 0.23999 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23682 _refine.ls_R_factor_R_free 0.29895 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 518 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 43.138 _refine.aniso_B[1][1] 0.14 _refine.aniso_B[2][2] 0.14 _refine.aniso_B[3][3] -0.28 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1IPR _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.318 _refine.pdbx_overall_ESU_R_Free 0.269 _refine.overall_SU_ML 0.210 _refine.overall_SU_B 8.599 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 961 _refine_hist.pdbx_number_atoms_nucleic_acid 363 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1406 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.92 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 1393 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.191 2.286 ? 1958 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.687 5.000 ? 116 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.013 22.889 ? 45 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.284 15.000 ? 172 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.005 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.120 0.200 ? 219 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 923 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.252 0.200 ? 554 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.315 0.200 ? 900 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.185 0.200 ? 78 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.325 0.200 ? 34 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.220 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.015 1.500 ? 603 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.788 2.000 ? 956 'X-RAY DIFFRACTION' ? r_scbond_it 2.563 3.000 ? 1016 'X-RAY DIFFRACTION' ? r_scangle_it 3.853 4.500 ? 1002 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_R_work 673 _refine_ls_shell.R_factor_R_work 0.328 _refine_ls_shell.percent_reflns_obs 92.16 _refine_ls_shell.R_factor_R_free 0.561 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2NL8 _struct.title 'The origin binding domain of the SV40 large T antigen bound non specifically to a 17 bp palindrome DNA (sites 1 and 3)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NL8 _struct_keywords.pdbx_keywords 'DNA binding protein/DNA' _struct_keywords.text 'DNA binding protein, DNA binding protein-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 2 UNP TALA_SV40 P03070 131 ;KVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVSAINN YAQKLCTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNP ; ? 2 1 PDB 2NL8 2NL8 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NL8 A 5 ? 133 ? P03070 131 ? 259 ? 131 259 2 2 2NL8 W 1 ? 18 ? 2NL8 10 ? 27 ? 10 27 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2NL8 GLY A 1 ? UNP P03070 ? ? 'cloning artifact' 127 1 1 2NL8 SER A 2 ? UNP P03070 ? ? 'cloning artifact' 128 2 1 2NL8 HIS A 3 ? UNP P03070 ? ? 'cloning artifact' 129 3 1 2NL8 MET A 4 ? UNP P03070 ? ? 'cloning artifact' 130 4 1 2NL8 SER A 90 ? UNP P03070 CYS 216 'engineered mutation' 216 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 43.8700000000 -1.0000000000 0.0000000000 0.0000000000 43.8700000000 0.0000000000 0.0000000000 -1.0000000000 119.1540000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR B 38 ? TYR B 53 ? THR A 164 TYR A 179 1 ? 16 HELX_P HELX_P2 2 ARG B 78 ? GLN B 87 ? ARG A 204 GLN A 213 1 ? 10 HELX_P HELX_P3 3 LYS B 102 ? ASP B 113 ? LYS A 228 ASP A 239 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 18 N3 ? ? W DG 11 W DC 27 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 18 O2 ? ? W DG 11 W DC 27 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 18 N4 ? ? W DG 11 W DC 27 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 17 N3 ? ? W DA 12 W DT 26 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 17 O4 ? ? W DA 12 W DT 26 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 16 N3 ? ? W DG 13 W DC 25 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 16 O2 ? ? W DG 13 W DC 25 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 16 N4 ? ? W DG 13 W DC 25 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 15 N3 ? ? W DG 14 W DC 24 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 15 O2 ? ? W DG 14 W DC 24 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 15 N4 ? ? W DG 14 W DC 24 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 14 N1 ? ? W DC 15 W DG 23 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 14 O6 ? ? W DC 15 W DG 23 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 14 N2 ? ? W DC 15 W DG 23 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 13 N1 ? ? W DC 16 W DG 22 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 13 O6 ? ? W DC 16 W DG 22 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 13 N2 ? ? W DC 16 W DG 22 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A DT 12 N3 ? ? W DA 17 W DT 21 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 A DT 12 O4 ? ? W DA 17 W DT 21 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 N3 ? ? ? 1_555 A DA 11 N1 ? ? W DT 18 W DA 20 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 O4 ? ? ? 1_555 A DA 11 N6 ? ? W DT 18 W DA 20 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N1 ? ? ? 1_555 A DT 9 N3 ? ? W DA 20 W DT 18 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 11 N6 ? ? ? 1_555 A DT 9 O4 ? ? W DA 20 W DT 18 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 8 N1 ? ? W DT 21 W DA 17 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 8 N6 ? ? W DT 21 W DA 17 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DC 7 N3 ? ? W DG 22 W DC 16 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DC 7 O2 ? ? W DG 22 W DC 16 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 O6 ? ? ? 1_555 A DC 7 N4 ? ? W DG 22 W DC 16 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DC 6 N3 ? ? W DG 23 W DC 15 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DC 6 O2 ? ? W DG 23 W DC 15 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DC 6 N4 ? ? W DG 23 W DC 15 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 15 N3 ? ? ? 1_555 A DG 5 N1 ? ? W DC 24 W DG 14 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 N4 ? ? ? 1_555 A DG 5 O6 ? ? W DC 24 W DG 14 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 O2 ? ? ? 1_555 A DG 5 N2 ? ? W DC 24 W DG 14 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 N3 ? ? ? 1_555 A DG 4 N1 ? ? W DC 25 W DG 13 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N4 ? ? ? 1_555 A DG 4 O6 ? ? W DC 25 W DG 13 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 A DG 4 N2 ? ? W DC 25 W DG 13 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 17 N3 ? ? ? 1_555 A DA 3 N1 ? ? W DT 26 W DA 12 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 17 O4 ? ? ? 1_555 A DA 3 N6 ? ? W DT 26 W DA 12 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 18 N3 ? ? ? 1_555 A DG 2 N1 ? ? W DC 27 W DG 11 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 18 N4 ? ? ? 1_555 A DG 2 O6 ? ? W DC 27 W DG 11 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 18 O2 ? ? ? 1_555 A DG 2 N2 ? ? W DC 27 W DG 11 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 113 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 239 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 114 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 240 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.15 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU B 95 ? GLY B 99 ? LEU A 221 GLY A 225 A 2 LEU B 30 ? THR B 37 ? LEU A 156 THR A 163 A 3 HIS B 66 ? HIS B 77 ? HIS A 192 HIS A 203 A 4 PHE B 57 ? SER B 63 ? PHE A 183 SER A 189 A 5 PHE B 115 ? GLU B 120 ? PHE A 241 GLU A 246 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS B 98 ? O LYS A 224 N ALA B 34 ? N ALA A 160 A 2 3 N LEU B 30 ? N LEU A 156 O HIS B 77 ? O HIS A 203 A 3 4 O PHE B 70 ? O PHE A 196 N SER B 59 ? N SER A 185 A 4 5 N ARG B 60 ? N ARG A 186 O GLU B 119 ? O GLU A 245 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 C7 _pdbx_validate_symm_contact.auth_asym_id_1 W _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 21 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OG _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 SER _pdbx_validate_symm_contact.auth_seq_id_2 152 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_665 _pdbx_validate_symm_contact.dist 2.01 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" W DG 11 ? ? "C3'" W DG 11 ? ? 1.373 1.419 -0.046 0.006 N 2 1 "O3'" W DA 12 ? ? "C3'" W DA 12 ? ? 1.379 1.419 -0.040 0.006 N 3 1 "O3'" W DG 14 ? ? "C3'" W DG 14 ? ? 1.361 1.419 -0.058 0.006 N 4 1 "O3'" W DC 15 ? ? "C3'" W DC 15 ? ? 1.371 1.419 -0.048 0.006 N 5 1 "O3'" W DC 19 ? ? "C3'" W DC 19 ? ? 1.381 1.419 -0.038 0.006 N 6 1 "C1'" W DT 21 ? ? N1 W DT 21 ? ? 1.582 1.488 0.094 0.013 N 7 1 "O3'" W DT 26 ? ? "C3'" W DT 26 ? ? 1.376 1.419 -0.043 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" W DG 11 ? ? "C2'" W DG 11 ? ? "C1'" W DG 11 ? ? 94.35 102.40 -8.05 0.80 N 2 1 "O4'" W DA 12 ? ? "C1'" W DA 12 ? ? N9 W DA 12 ? ? 103.79 108.00 -4.21 0.70 N 3 1 "O4'" W DG 13 ? ? "C1'" W DG 13 ? ? "C2'" W DG 13 ? ? 100.69 105.90 -5.21 0.80 N 4 1 P W DG 14 ? ? "O5'" W DG 14 ? ? "C5'" W DG 14 ? ? 135.79 120.90 14.89 1.60 N 5 1 "O4'" W DG 14 ? ? "C4'" W DG 14 ? ? "C3'" W DG 14 ? ? 102.04 104.50 -2.46 0.40 N 6 1 "O4'" W DG 14 ? ? "C1'" W DG 14 ? ? N9 W DG 14 ? ? 111.30 108.30 3.00 0.30 N 7 1 "O4'" W DC 15 ? ? "C4'" W DC 15 ? ? "C3'" W DC 15 ? ? 101.89 104.50 -2.61 0.40 N 8 1 "O4'" W DC 15 ? ? "C1'" W DC 15 ? ? N1 W DC 15 ? ? 111.00 108.30 2.70 0.30 N 9 1 N3 W DC 15 ? ? C4 W DC 15 ? ? N4 W DC 15 ? ? 113.17 118.00 -4.83 0.70 N 10 1 "O4'" W DC 16 ? ? "C1'" W DC 16 ? ? N1 W DC 16 ? ? 111.48 108.30 3.18 0.30 N 11 1 "O4'" W DA 17 ? ? "C4'" W DA 17 ? ? "C3'" W DA 17 ? ? 101.63 104.50 -2.87 0.40 N 12 1 C5 W DA 17 ? ? N7 W DA 17 ? ? C8 W DA 17 ? ? 100.59 103.90 -3.31 0.50 N 13 1 "O4'" W DC 19 ? ? "C1'" W DC 19 ? ? "C2'" W DC 19 ? ? 99.94 105.90 -5.96 0.80 N 14 1 "O4'" W DC 19 ? ? "C1'" W DC 19 ? ? N1 W DC 19 ? ? 111.49 108.30 3.19 0.30 N 15 1 N1 W DC 19 ? ? C2 W DC 19 ? ? O2 W DC 19 ? ? 122.71 118.90 3.81 0.60 N 16 1 N3 W DC 19 ? ? C2 W DC 19 ? ? O2 W DC 19 ? ? 117.49 121.90 -4.41 0.70 N 17 1 N1 W DA 20 ? ? C2 W DA 20 ? ? N3 W DA 20 ? ? 124.86 129.30 -4.44 0.50 N 18 1 C2 W DA 20 ? ? N3 W DA 20 ? ? C4 W DA 20 ? ? 113.92 110.60 3.32 0.50 N 19 1 "O4'" W DT 21 ? ? "C4'" W DT 21 ? ? "C3'" W DT 21 ? ? 101.81 104.50 -2.69 0.40 N 20 1 "O4'" W DT 21 ? ? "C1'" W DT 21 ? ? "C2'" W DT 21 ? ? 97.34 105.90 -8.56 0.80 N 21 1 N1 W DT 21 ? ? C2 W DT 21 ? ? N3 W DT 21 ? ? 120.67 114.60 6.07 0.60 N 22 1 C2 W DT 21 ? ? N3 W DT 21 ? ? C4 W DT 21 ? ? 120.03 127.20 -7.17 0.60 N 23 1 C4 W DT 21 ? ? C5 W DT 21 ? ? C6 W DT 21 ? ? 124.26 118.00 6.26 0.60 N 24 1 C5 W DT 21 ? ? C6 W DT 21 ? ? N1 W DT 21 ? ? 118.63 123.70 -5.07 0.60 N 25 1 N3 W DT 21 ? ? C2 W DT 21 ? ? O2 W DT 21 ? ? 115.66 122.30 -6.64 0.60 N 26 1 C6 W DT 21 ? ? C5 W DT 21 ? ? C7 W DT 21 ? ? 118.97 122.90 -3.93 0.60 N 27 1 "C3'" W DG 22 ? ? "C2'" W DG 22 ? ? "C1'" W DG 22 ? ? 97.19 102.40 -5.21 0.80 N 28 1 "O4'" W DG 22 ? ? "C1'" W DG 22 ? ? N9 W DG 22 ? ? 114.31 108.30 6.01 0.30 N 29 1 "O4'" W DG 23 ? ? "C1'" W DG 23 ? ? N9 W DG 23 ? ? 112.89 108.30 4.59 0.30 N 30 1 "O4'" W DC 24 ? ? "C1'" W DC 24 ? ? "C2'" W DC 24 ? ? 100.77 105.90 -5.13 0.80 N 31 1 "O4'" W DC 24 ? ? "C1'" W DC 24 ? ? N1 W DC 24 ? ? 115.00 108.30 6.70 0.30 N 32 1 "O4'" W DC 25 ? ? "C1'" W DC 25 ? ? N1 W DC 25 ? ? 115.87 108.30 7.57 0.30 N 33 1 N1 W DC 25 ? ? C2 W DC 25 ? ? O2 W DC 25 ? ? 123.32 118.90 4.42 0.60 N 34 1 "O5'" W DT 26 ? ? "C5'" W DT 26 ? ? "C4'" W DT 26 ? ? 102.56 109.40 -6.84 0.80 N 35 1 CA A LEU 156 ? ? CB A LEU 156 ? ? CG A LEU 156 ? ? 138.26 115.30 22.96 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 135 ? ? -49.85 150.65 2 1 ALA A 157 ? ? -141.31 12.77 3 1 TYR A 190 ? ? 52.78 -118.73 4 1 ARG A 238 ? ? -75.73 -79.49 5 1 ASP A 239 ? ? 162.04 130.20 6 1 PRO A 240 ? ? -68.86 42.85 7 1 SER A 247 ? ? -65.82 0.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 127 ? B GLY 1 2 1 Y 1 A SER 128 ? B SER 2 3 1 Y 1 A HIS 129 ? B HIS 3 4 1 Y 1 A MET 130 ? B MET 4 5 1 Y 1 A LYS 131 ? B LYS 5 6 1 Y 1 A VAL 132 ? B VAL 6 7 1 Y 1 A GLY 250 ? B GLY 124 8 1 Y 1 A GLY 251 ? B GLY 125 9 1 Y 1 A LEU 252 ? B LEU 126 10 1 Y 1 A LYS 253 ? B LYS 127 11 1 Y 1 A GLU 254 ? B GLU 128 12 1 Y 1 A HIS 255 ? B HIS 129 13 1 Y 1 A ASP 256 ? B ASP 130 14 1 Y 1 A PHE 257 ? B PHE 131 15 1 Y 1 A ASN 258 ? B ASN 132 16 1 Y 1 A PRO 259 ? B PRO 133 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 VAL N N N N 488 VAL CA C N S 489 VAL C C N N 490 VAL O O N N 491 VAL CB C N N 492 VAL CG1 C N N 493 VAL CG2 C N N 494 VAL OXT O N N 495 VAL H H N N 496 VAL H2 H N N 497 VAL HA H N N 498 VAL HB H N N 499 VAL HG11 H N N 500 VAL HG12 H N N 501 VAL HG13 H N N 502 VAL HG21 H N N 503 VAL HG22 H N N 504 VAL HG23 H N N 505 VAL HXT H N N 506 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2NL8 'double helix' 2NL8 'b-form double helix' 2NL8 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 A DC 18 8_665 -0.041 -0.375 -0.420 -12.802 -18.851 -5.927 1 W_DG11:DC27_W W 11 ? W 27 ? 19 1 1 A DA 3 1_555 A DT 17 8_665 -0.313 -0.146 -0.070 -11.111 -11.705 0.190 2 W_DA12:DT26_W W 12 ? W 26 ? 20 1 1 A DG 4 1_555 A DC 16 8_665 -0.048 -0.053 0.154 3.725 -8.387 3.275 3 W_DG13:DC25_W W 13 ? W 25 ? 19 1 1 A DG 5 1_555 A DC 15 8_665 0.095 -0.262 0.383 -7.916 -16.646 2.107 4 W_DG14:DC24_W W 14 ? W 24 ? 19 1 1 A DC 6 1_555 A DG 14 8_665 0.428 -0.437 0.206 -11.791 -16.004 1.987 5 W_DC15:DG23_W W 15 ? W 23 ? 19 1 1 A DC 7 1_555 A DG 13 8_665 0.207 -0.302 0.222 -12.608 -2.005 1.304 6 W_DC16:DG22_W W 16 ? W 22 ? 19 1 1 A DA 8 1_555 A DT 12 8_665 0.795 -0.209 0.056 5.329 -11.265 -2.945 7 W_DA17:DT21_W W 17 ? W 21 ? 20 1 1 A DT 9 1_555 A DA 11 8_665 0.135 -0.004 -0.045 -3.381 -11.986 -2.686 8 W_DT18:DA20_W W 18 ? W 20 ? 20 1 1 A DA 11 1_555 A DT 9 8_665 -0.135 -0.004 -0.045 3.381 -11.986 -2.686 9 W_DA20:DT18_W W 20 ? W 18 ? 20 1 1 A DT 12 1_555 A DA 8 8_665 -0.795 -0.209 0.056 -5.329 -11.265 -2.945 10 W_DT21:DA17_W W 21 ? W 17 ? 20 1 1 A DG 13 1_555 A DC 7 8_665 -0.207 -0.302 0.222 12.608 -2.005 1.304 11 W_DG22:DC16_W W 22 ? W 16 ? 19 1 1 A DG 14 1_555 A DC 6 8_665 -0.428 -0.437 0.206 11.791 -16.004 1.987 12 W_DG23:DC15_W W 23 ? W 15 ? 19 1 1 A DC 15 1_555 A DG 5 8_665 -0.095 -0.262 0.383 7.916 -16.645 2.107 13 W_DC24:DG14_W W 24 ? W 14 ? 19 1 1 A DC 16 1_555 A DG 4 8_665 0.048 -0.053 0.154 -3.725 -8.387 3.275 14 W_DC25:DG13_W W 25 ? W 13 ? 19 1 1 A DT 17 1_555 A DA 3 8_665 0.313 -0.146 -0.070 11.111 -11.705 0.190 15 W_DT26:DA12_W W 26 ? W 12 ? 20 1 1 A DC 18 1_555 A DG 2 8_665 0.041 -0.375 -0.420 12.802 -18.851 -5.927 16 W_DC27:DG11_W W 27 ? W 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 A DC 18 8_665 A DA 3 1_555 A DT 17 8_665 -0.135 1.025 3.190 -8.114 1.196 40.956 1.315 -0.651 3.186 1.689 11.458 41.734 1 WW_DG11DA12:DT26DC27_WW W 11 ? W 27 ? W 12 ? W 26 ? 1 A DA 3 1_555 A DT 17 8_665 A DG 4 1_555 A DC 16 8_665 0.570 -0.108 3.010 -2.544 6.571 28.451 -1.504 -1.626 2.853 13.116 5.078 29.293 2 WW_DA12DG13:DC25DT26_WW W 12 ? W 26 ? W 13 ? W 25 ? 1 A DG 4 1_555 A DC 16 8_665 A DG 5 1_555 A DC 15 8_665 -0.418 -0.667 3.548 -4.154 1.841 35.906 -1.355 0.037 3.535 2.972 6.705 36.183 3 WW_DG13DG14:DC24DC25_WW W 13 ? W 25 ? W 14 ? W 24 ? 1 A DG 5 1_555 A DC 15 8_665 A DC 6 1_555 A DG 14 8_665 -0.442 -1.091 3.442 4.285 0.818 33.853 -1.994 1.460 3.336 1.398 -7.320 34.125 4 WW_DG14DC15:DG23DC24_WW W 14 ? W 24 ? W 15 ? W 23 ? 1 A DC 6 1_555 A DG 14 8_665 A DC 7 1_555 A DG 13 8_665 0.841 -0.103 3.345 3.624 4.785 35.100 -0.889 -0.830 3.369 7.863 -5.955 35.593 5 WW_DC15DC16:DG22DG23_WW W 15 ? W 23 ? W 16 ? W 22 ? 1 A DC 7 1_555 A DG 13 8_665 A DA 8 1_555 A DT 12 8_665 -1.227 0.725 3.006 2.626 1.417 32.556 1.066 2.593 2.929 2.521 -4.673 32.689 6 WW_DC16DA17:DT21DG22_WW W 16 ? W 22 ? W 17 ? W 21 ? 1 A DA 8 1_555 A DT 12 8_665 A DT 9 1_555 A DA 11 8_665 0.084 -0.719 3.552 1.201 -0.447 31.998 -1.216 0.082 3.563 -0.810 -2.177 32.023 7 WW_DA17DT18:DA20DT21_WW W 17 ? W 21 ? W 18 ? W 20 ? 1 A DT 9 1_555 A DA 11 8_665 A DA 11 1_555 A DT 9 8_665 0.000 0.183 6.673 0.000 0.900 67.643 0.094 0.000 6.675 0.809 0.000 67.648 8 WW_DT18DA20:DT18DA20_WW W 18 ? W 20 ? W 20 ? W 18 ? 1 A DA 11 1_555 A DT 9 8_665 A DT 12 1_555 A DA 8 8_665 -0.084 -0.719 3.552 -1.201 -0.447 31.998 -1.216 -0.082 3.563 -0.810 2.177 32.023 9 WW_DA20DT21:DA17DT18_WW W 20 ? W 18 ? W 21 ? W 17 ? 1 A DT 12 1_555 A DA 8 8_665 A DG 13 1_555 A DC 7 8_665 1.227 0.725 3.006 -2.626 1.417 32.556 1.066 -2.593 2.929 2.521 4.673 32.689 10 WW_DT21DG22:DC16DA17_WW W 21 ? W 17 ? W 22 ? W 16 ? 1 A DG 13 1_555 A DC 7 8_665 A DG 14 1_555 A DC 6 8_665 -0.841 -0.103 3.345 -3.624 4.785 35.100 -0.889 0.830 3.369 7.863 5.955 35.593 11 WW_DG22DG23:DC15DC16_WW W 22 ? W 16 ? W 23 ? W 15 ? 1 A DG 14 1_555 A DC 6 8_665 A DC 15 1_555 A DG 5 8_665 0.442 -1.091 3.442 -4.284 0.818 33.853 -1.994 -1.460 3.336 1.398 7.320 34.125 12 WW_DG23DC24:DG14DC15_WW W 23 ? W 15 ? W 24 ? W 14 ? 1 A DC 15 1_555 A DG 5 8_665 A DC 16 1_555 A DG 4 8_665 0.418 -0.667 3.548 4.154 1.841 35.906 -1.355 -0.037 3.535 2.972 -6.705 36.183 13 WW_DC24DC25:DG13DG14_WW W 24 ? W 14 ? W 25 ? W 13 ? 1 A DC 16 1_555 A DG 4 8_665 A DT 17 1_555 A DA 3 8_665 -0.570 -0.108 3.010 2.544 6.571 28.451 -1.504 1.626 2.853 13.116 -5.078 29.293 14 WW_DC25DT26:DA12DG13_WW W 25 ? W 13 ? W 26 ? W 12 ? 1 A DT 17 1_555 A DA 3 8_665 A DC 18 1_555 A DG 2 8_665 0.135 1.025 3.190 8.114 1.196 40.956 1.315 0.651 3.186 1.689 -11.458 41.734 15 WW_DT26DC27:DG11DA12_WW W 26 ? W 12 ? W 27 ? W 11 ? # _pdbx_initial_refinement_model.accession_code 2IPR _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 2NL8 _atom_sites.fract_transf_matrix[1][1] 0.022795 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022795 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004196 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_