HEADER UNKNOWN FUNCTION 20-OCT-06 2NLV TITLE CRYSTAL STRUCTURE OF A XISI-LIKE PROTEIN (AVA_3825) FROM ANABAENA TITLE 2 VARIABILIS ATCC 29413 AT 1.30 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: XISI PROTEIN-LIKE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANABAENA VARIABILIS; SOURCE 3 ORGANISM_TAXID: 240292; SOURCE 4 STRAIN: ATCC 29413; SOURCE 5 GENE: YP_324325.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS XISI-LIKE PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, PSI-BIOLOGY, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 25-JAN-23 2NLV 1 REMARK SEQADV LINK REVDAT 7 18-OCT-17 2NLV 1 REMARK REVDAT 6 24-SEP-14 2NLV 1 JRNL REVDAT 5 10-SEP-14 2NLV 1 JRNL KEYWDS REMARK REVDAT 4 13-JUL-11 2NLV 1 VERSN REVDAT 3 28-JUL-10 2NLV 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2NLV 1 VERSN REVDAT 1 05-DEC-06 2NLV 0 JRNL AUTH W.C.HWANG,J.W.GOLDEN,J.PASCUAL,D.XU,A.CHELTSOV,A.GODZIK JRNL TITL SITE-SPECIFIC RECOMBINATION OF NITROGEN-FIXATION GENES IN JRNL TITL 2 CYANOBACTERIA BY XISF-XISH-XISI COMPLEX: STRUCTURES AND JRNL TITL 3 MODELS. JRNL REF PROTEINS 2014 JRNL REFN ESSN 1097-0134 JRNL PMID 25179344 JRNL DOI 10.1002/PROT.24679 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 52745 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2675 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3600 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 190 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1808 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 296 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 11.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.056 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.699 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2117 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1418 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2906 ; 1.758 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3467 ; 1.000 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 273 ; 6.642 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;36.736 ;24.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 385 ;12.956 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;21.174 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 309 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2492 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 443 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 387 ; 0.239 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1636 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1058 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1171 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 197 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.390 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 32 ; 0.310 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.151 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1389 ; 2.003 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 505 ; 0.463 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2087 ; 2.480 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 951 ; 3.917 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 819 ; 5.631 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): 34.1093 0.6239 13.2380 REMARK 3 T TENSOR REMARK 3 T11: -0.0027 T22: -0.0037 REMARK 3 T33: -0.0065 T12: -0.0086 REMARK 3 T13: 0.0033 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.4045 L22: 0.1259 REMARK 3 L33: 0.1292 L12: -0.1810 REMARK 3 L13: 0.1838 L23: -0.0779 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.0522 S13: -0.0267 REMARK 3 S21: 0.0178 S22: 0.0058 S23: 0.0234 REMARK 3 S31: 0.0045 S32: -0.0480 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): 54.1044 1.8808 18.7640 REMARK 3 T TENSOR REMARK 3 T11: -0.0213 T22: 0.0123 REMARK 3 T33: -0.0182 T12: -0.0111 REMARK 3 T13: 0.0062 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.7646 L22: 0.3875 REMARK 3 L33: 1.3614 L12: 0.1877 REMARK 3 L13: 0.0518 L23: 0.5577 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: -0.0830 S13: 0.0009 REMARK 3 S21: -0.0499 S22: 0.0308 S23: -0.0220 REMARK 3 S31: -0.0229 S32: 0.2104 S33: -0.0270 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 (1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 (2) A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. REMARK 3 (3) ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 4 REMARK 4 2NLV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000040021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000, 0.9795, 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52812 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.099 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.61800 REMARK 200 R SYM FOR SHELL (I) : 0.61800 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LICL, 20.0% PEG-6000, 0.1M TRIS, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 18.67700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT REMARK 300 SCATTERING SUPPORTS THE ASSIGNMENT REMARK 300 OF A DIMER AS A BIOLOGICALLY SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 ASP B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 13 CE NZ REMARK 470 GLN A 26 CG CD OE1 NE2 REMARK 470 GLU A 37 OE1 OE2 REMARK 470 LYS A 102 NZ REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 LYS B 6 CD CE NZ REMARK 470 GLU B 37 CD OE1 OE2 REMARK 470 LYS B 102 CE NZ REMARK 470 ASP B 107 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 32 N CA C O CB CG CD1 REMARK 480 LEU A 32 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 77 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 56 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 55 89.96 -153.08 REMARK 500 TYR A 108 -133.56 -110.02 REMARK 500 SER B 24 162.38 -40.62 REMARK 500 TYR B 108 -156.56 -106.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 115 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-367696 RELATED DB: TARGETDB DBREF 2NLV A 1 111 UNP Q3M6F6 Q3M6F6_ANAVT 1 111 DBREF 2NLV B 1 111 UNP Q3M6F6 Q3M6F6_ANAVT 1 111 SEQADV 2NLV GLY A 0 UNP Q3M6F6 EXPRESSION TAG SEQADV 2NLV GLY B 0 UNP Q3M6F6 EXPRESSION TAG SEQRES 1 A 112 GLY MSE ASP LYS LEU VAL LYS TYR GLN GLU LEU VAL LYS SEQRES 2 A 112 LYS LEU LEU THR ASN TYR ALA SER ASP ASP VAL SER ASP SEQRES 3 A 112 GLN ASP VAL GLU VAL GLN LEU ILE LEU ASP THR GLU ARG SEQRES 4 A 112 ASN HIS TYR GLN TRP MSE ASN VAL GLY TRP GLN GLY LEU SEQRES 5 A 112 ASN ARG ILE TYR ARG CYS VAL ILE HIS PHE ASP ILE LYS SEQRES 6 A 112 ASP GLY LYS ILE TRP LEU GLN GLN ASN LEU THR ASP ARG SEQRES 7 A 112 ASN PRO ALA GLU GLU LEU VAL MSE MSE GLY VAL PRO ARG SEQRES 8 A 112 GLU ASP ILE VAL LEU GLY LEU GLN ALA PRO TYR LYS ARG SEQRES 9 A 112 GLN TYR THR ASP TYR GLY VAL ALA SEQRES 1 B 112 GLY MSE ASP LYS LEU VAL LYS TYR GLN GLU LEU VAL LYS SEQRES 2 B 112 LYS LEU LEU THR ASN TYR ALA SER ASP ASP VAL SER ASP SEQRES 3 B 112 GLN ASP VAL GLU VAL GLN LEU ILE LEU ASP THR GLU ARG SEQRES 4 B 112 ASN HIS TYR GLN TRP MSE ASN VAL GLY TRP GLN GLY LEU SEQRES 5 B 112 ASN ARG ILE TYR ARG CYS VAL ILE HIS PHE ASP ILE LYS SEQRES 6 B 112 ASP GLY LYS ILE TRP LEU GLN GLN ASN LEU THR ASP ARG SEQRES 7 B 112 ASN PRO ALA GLU GLU LEU VAL MSE MSE GLY VAL PRO ARG SEQRES 8 B 112 GLU ASP ILE VAL LEU GLY LEU GLN ALA PRO TYR LYS ARG SEQRES 9 B 112 GLN TYR THR ASP TYR GLY VAL ALA MODRES 2NLV MSE A 1 MET SELENOMETHIONINE MODRES 2NLV MSE A 44 MET SELENOMETHIONINE MODRES 2NLV MSE A 85 MET SELENOMETHIONINE MODRES 2NLV MSE A 86 MET SELENOMETHIONINE MODRES 2NLV MSE B 44 MET SELENOMETHIONINE MODRES 2NLV MSE B 85 MET SELENOMETHIONINE MODRES 2NLV MSE B 86 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 44 8 HET MSE A 85 16 HET MSE A 86 16 HET MSE B 44 16 HET MSE B 85 16 HET MSE B 86 8 HET CL A 112 1 HET CL A 113 1 HET CL A 114 1 HET CL A 115 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 3 CL 4(CL 1-) FORMUL 7 HOH *296(H2 O) HELIX 1 1 GLY A 0 ASP A 21 1 22 HELIX 2 2 ASN A 78 MSE A 86 1 9 HELIX 3 3 PRO A 89 GLU A 91 5 3 HELIX 4 4 ALA A 99 THR A 106 5 8 HELIX 5 5 LYS B 3 ASP B 22 1 20 HELIX 6 6 ASN B 78 MSE B 86 1 9 HELIX 7 7 PRO B 89 GLU B 91 5 3 HELIX 8 8 ALA B 99 THR B 106 5 8 SHEET 1 A 5 VAL A 28 ASP A 35 0 SHEET 2 A 5 HIS A 40 GLN A 49 -1 O HIS A 40 N ASP A 35 SHEET 3 A 5 ASN A 52 LYS A 64 -1 O PHE A 61 N TYR A 41 SHEET 4 A 5 LYS A 67 ASN A 73 -1 O TRP A 69 N ASP A 62 SHEET 5 A 5 ILE A 93 LEU A 95 1 O VAL A 94 N ILE A 68 SHEET 1 B 5 VAL B 28 ASP B 35 0 SHEET 2 B 5 HIS B 40 GLN B 49 -1 O HIS B 40 N ASP B 35 SHEET 3 B 5 ASN B 52 LYS B 64 -1 O ILE B 54 N GLY B 47 SHEET 4 B 5 LYS B 67 ASN B 73 -1 O GLN B 71 N HIS B 60 SHEET 5 B 5 ILE B 93 LEU B 95 1 O VAL B 94 N ILE B 68 LINK C GLY A 0 N MSE A 1 1555 1555 1.32 LINK C MSE A 1 N ASP A 2 1555 1555 1.33 LINK C TRP A 43 N MSE A 44 1555 1555 1.31 LINK C MSE A 44 N ASN A 45 1555 1555 1.31 LINK C VAL A 84 N AMSE A 85 1555 1555 1.34 LINK C VAL A 84 N BMSE A 85 1555 1555 1.32 LINK C AMSE A 85 N AMSE A 86 1555 1555 1.34 LINK C BMSE A 85 N BMSE A 86 1555 1555 1.34 LINK CE BMSE A 85 CE BMSE B 85 1655 1555 1.18 LINK CE BMSE A 85 CE BMSE B 85 1555 1455 1.18 LINK C AMSE A 86 N GLY A 87 1555 1555 1.32 LINK C BMSE A 86 N GLY A 87 1555 1555 1.34 LINK C TRP B 43 N AMSE B 44 1555 1555 1.32 LINK C TRP B 43 N BMSE B 44 1555 1555 1.34 LINK C AMSE B 44 N ASN B 45 1555 1555 1.33 LINK C BMSE B 44 N ASN B 45 1555 1555 1.34 LINK C VAL B 84 N AMSE B 85 1555 1555 1.34 LINK C VAL B 84 N BMSE B 85 1555 1555 1.33 LINK C AMSE B 85 N MSE B 86 1555 1555 1.31 LINK C BMSE B 85 N MSE B 86 1555 1555 1.34 LINK C MSE B 86 N GLY B 87 1555 1555 1.32 SITE 1 AC1 3 ARG A 103 ALA A 111 HOH A 195 SITE 1 AC2 5 ARG A 56 CYS A 57 GLN A 72 HOH A 237 SITE 2 AC2 5 HOH B 177 SITE 1 AC3 2 ARG A 103 TRP B 48 SITE 1 AC4 3 LEU A 32 HOH A 135 HIS B 40 CRYST1 46.779 37.354 63.453 90.00 97.22 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021380 0.000000 0.002710 0.00000 SCALE2 0.000000 0.026770 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015890 0.00000