HEADER LIGAND BINDING PROTEIN 24-OCT-06 2NNC TITLE STRUCTURE OF THE SULFUR CARRIER PROTEIN SOXY FROM CHLOROBIUM LIMICOLA TITLE 2 F THIOSULFATOPHILUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFUR COVALENTLY-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROBIUM LIMICOLA; SOURCE 3 ORGANISM_TAXID: 1092; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C43(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS SULFUR BINDING PROTEIN, SOXY, BETA SANDWICH, GREEN SULFUR BACTERIUM, KEYWDS 2 LIGAND BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.STOUT,G.VAN DRIESSCHE,S.N.SAVVIDES,J.VAN BEEUMEN REVDAT 5 27-DEC-23 2NNC 1 REMARK SEQADV REVDAT 4 18-OCT-17 2NNC 1 REMARK REVDAT 3 13-JUL-11 2NNC 1 VERSN REVDAT 2 24-FEB-09 2NNC 1 VERSN REVDAT 1 13-MAR-07 2NNC 0 JRNL AUTH J.STOUT,G.VAN DRIESSCHE,S.N.SAVVIDES,J.VAN BEEUMEN JRNL TITL X-RAY CRYSTALLOGRAPHIC ANALYSIS OF THE SULFUR CARRIER JRNL TITL 2 PROTEIN SOXY FROM CHLOROBIUM LIMICOLA F. THIOSULFATOPHILUM JRNL TITL 3 REVEALS A TETRAMERIC STRUCTURE. JRNL REF PROTEIN SCI. V. 16 589 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17327392 JRNL DOI 10.1110/PS.062633607 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 12527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 619 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 302 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 33.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 16 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.35000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : 0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.828 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1648 ; 0.011 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): 1576 ; 0.001 ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2248 ; 1.317 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): 3637 ; 0.717 ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 223 ; 6.364 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 48 ;40.415 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 253 ;13.338 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;19.826 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 282 ; 0.069 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1819 ; 0.004 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): 294 ; 0.001 ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 276 ; 0.179 ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1454 ; 0.192 ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 789 ; 0.171 ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 987 ; 0.086 ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 45 ; 0.138 ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.130 ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): 43 ; 0.189 ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.039 ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1165 ; 0.571 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 448 ; 0.118 ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1826 ; 0.788 ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 546 ; 1.354 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 422 ; 2.155 ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9790 58.7478 42.5442 REMARK 3 T TENSOR REMARK 3 T11: -0.2222 T22: 0.1925 REMARK 3 T33: -0.2725 T12: -0.0953 REMARK 3 T13: -0.0127 T23: 0.1118 REMARK 3 L TENSOR REMARK 3 L11: 6.7043 L22: 27.9973 REMARK 3 L33: 11.2964 L12: 8.8574 REMARK 3 L13: -5.3352 L23: 1.1268 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.2315 S13: 0.3573 REMARK 3 S21: -0.6477 S22: 0.3079 S23: 0.1431 REMARK 3 S31: -1.0631 S32: 0.8711 S33: -0.3794 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9649 55.5196 33.7477 REMARK 3 T TENSOR REMARK 3 T11: -0.2153 T22: -0.2262 REMARK 3 T33: -0.2906 T12: -0.0715 REMARK 3 T13: 0.0238 T23: 0.0426 REMARK 3 L TENSOR REMARK 3 L11: 4.1433 L22: 3.9572 REMARK 3 L33: 8.0375 L12: -0.7129 REMARK 3 L13: 1.2213 L23: -1.1267 REMARK 3 S TENSOR REMARK 3 S11: -0.1217 S12: 0.0251 S13: -0.1295 REMARK 3 S21: -0.2012 S22: -0.0432 S23: 0.1983 REMARK 3 S31: -0.3241 S32: 0.5920 S33: 0.1650 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 21 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3349 29.4260 51.4867 REMARK 3 T TENSOR REMARK 3 T11: -0.0452 T22: 0.1675 REMARK 3 T33: 0.4030 T12: -0.1680 REMARK 3 T13: -0.1103 T23: 0.5481 REMARK 3 L TENSOR REMARK 3 L11: 5.0829 L22: 55.1183 REMARK 3 L33: 0.8040 L12: 15.4043 REMARK 3 L13: -1.9458 L23: -5.1905 REMARK 3 S TENSOR REMARK 3 S11: 0.1257 S12: -0.5823 S13: -0.9535 REMARK 3 S21: 0.3860 S22: -0.7671 S23: -1.8110 REMARK 3 S31: -0.1213 S32: 0.4744 S33: 0.6414 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): -1.9256 39.7501 41.5862 REMARK 3 T TENSOR REMARK 3 T11: -0.0793 T22: -0.1839 REMARK 3 T33: 0.0164 T12: -0.1020 REMARK 3 T13: -0.0493 T23: 0.1446 REMARK 3 L TENSOR REMARK 3 L11: 8.7654 L22: 10.9809 REMARK 3 L33: 5.3144 L12: 3.9140 REMARK 3 L13: 1.0960 L23: -1.9030 REMARK 3 S TENSOR REMARK 3 S11: 0.1911 S12: -0.2035 S13: -1.0289 REMARK 3 S21: -0.6070 S22: -0.0658 S23: 0.3200 REMARK 3 S31: 0.9538 S32: -0.2838 S33: -0.1253 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000040071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-05; 26-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 293 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG; EMBL/DESY, REMARK 200 HAMBURG REMARK 200 BEAMLINE : BW7A; BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.06; 1.04 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13122 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 7.810 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE 2.08, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM PHOSPHATE, SODIUM ACETATE, REMARK 280 DTT, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.65150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.65150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.36250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.05700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.36250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.05700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.65150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.36250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.05700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.65150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.36250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.05700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 120.11400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 95.30300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 TRP A 2 REMARK 465 SER A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 PHE A 7 REMARK 465 GLY A 118 REMARK 465 GLY A 119 REMARK 465 CYS A 120 REMARK 465 GLY A 121 REMARK 465 GLY A 122 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 THR B 116 REMARK 465 ILE B 117 REMARK 465 GLY B 118 REMARK 465 GLY B 119 REMARK 465 CYS B 120 REMARK 465 GLY B 121 REMARK 465 GLY B 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 11 CE NZ REMARK 470 LYS A 34 CE NZ REMARK 470 ILE A 38 CD1 REMARK 470 ARG A 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 92 NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 ILE A 117 CD1 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LYS B 5 CE NZ REMARK 470 LYS B 11 CE NZ REMARK 470 ILE B 25 CD1 REMARK 470 LYS B 34 CE NZ REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 ILE B 38 CD1 REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 ASN B 41 CG OD1 ND2 REMARK 470 PHE B 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 79 CD NE CZ NH1 NH2 REMARK 470 ARG B 87 NE CZ NH1 NH2 REMARK 470 ARG B 89 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 92 CG CD CE NZ REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 VAL B 115 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 81 72.53 37.57 REMARK 500 ALA B 30 35.98 -86.25 REMARK 500 PRO B 54 -72.94 -49.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDZ A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDZ A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HDZ A 1007 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NNF RELATED DB: PDB DBREF 2NNC A 1 122 UNP Q8RLX2 Q8RLX2_CHLLI 33 154 DBREF 2NNC B 1 122 UNP Q8RLX2 Q8RLX2_CHLLI 33 154 SEQADV 2NNC MET A -1 UNP Q8RLX2 CLONING ARTIFACT SEQADV 2NNC GLY A 0 UNP Q8RLX2 CLONING ARTIFACT SEQADV 2NNC ASP A 14 UNP Q8RLX2 GLU 46 SEE REMARK 999 SEQADV 2NNC MET B -1 UNP Q8RLX2 CLONING ARTIFACT SEQADV 2NNC GLY B 0 UNP Q8RLX2 CLONING ARTIFACT SEQADV 2NNC ASP B 14 UNP Q8RLX2 GLU 46 SEE REMARK 999 SEQRES 1 A 124 MET GLY SER TRP SER GLU LYS ALA PHE SER ALA SER LYS SEQRES 2 A 124 LEU ASP ASP ALA ILE ALA ALA LYS PHE GLY SER LEU PRO SEQRES 3 A 124 ILE GLN GLU SER THR ALA ILE GLN ILE LYS ALA PRO GLU SEQRES 4 A 124 ILE ALA GLU ASN GLY ALA PHE VAL PRO VAL THR VAL ALA SEQRES 5 A 124 THR SER ILE PRO GLY ALA THR ASN ILE SER ILE PHE THR SEQRES 6 A 124 PRO ALA ASN PHE SER PRO MET VAL ALA SER PHE ASP VAL SEQRES 7 A 124 LEU PRO ARG MET LYS PRO GLU VAL SER LEU ARG MET ARG SEQRES 8 A 124 MET ALA LYS THR GLU ASN LEU VAL VAL VAL VAL GLN ALA SEQRES 9 A 124 GLY GLY LYS LEU TYR ARG ALA VAL ARG GLU VAL LYS VAL SEQRES 10 A 124 THR ILE GLY GLY CYS GLY GLY SEQRES 1 B 124 MET GLY SER TRP SER GLU LYS ALA PHE SER ALA SER LYS SEQRES 2 B 124 LEU ASP ASP ALA ILE ALA ALA LYS PHE GLY SER LEU PRO SEQRES 3 B 124 ILE GLN GLU SER THR ALA ILE GLN ILE LYS ALA PRO GLU SEQRES 4 B 124 ILE ALA GLU ASN GLY ALA PHE VAL PRO VAL THR VAL ALA SEQRES 5 B 124 THR SER ILE PRO GLY ALA THR ASN ILE SER ILE PHE THR SEQRES 6 B 124 PRO ALA ASN PHE SER PRO MET VAL ALA SER PHE ASP VAL SEQRES 7 B 124 LEU PRO ARG MET LYS PRO GLU VAL SER LEU ARG MET ARG SEQRES 8 B 124 MET ALA LYS THR GLU ASN LEU VAL VAL VAL VAL GLN ALA SEQRES 9 B 124 GLY GLY LYS LEU TYR ARG ALA VAL ARG GLU VAL LYS VAL SEQRES 10 B 124 THR ILE GLY GLY CYS GLY GLY HET CL A 123 1 HET PO4 A1004 5 HET HDZ A1005 2 HET HDZ A1006 2 HET HDZ A1007 2 HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION HETNAM HDZ NITROGEN MOLECULE FORMUL 3 CL CL 1- FORMUL 4 PO4 O4 P 3- FORMUL 5 HDZ 3(N2) FORMUL 8 HOH *47(H2 O) HELIX 1 1 SER A 8 GLY A 21 1 14 HELIX 2 2 SER B 1 GLY B 21 1 21 SHEET 1 A 3 ILE A 25 GLU A 27 0 SHEET 2 A 3 LYS A 105 VAL A 115 1 O ARG A 108 N GLN A 26 SHEET 3 A 3 ILE A 38 ALA A 39 1 N ALA A 39 O LYS A 114 SHEET 1 B10 ILE A 25 GLU A 27 0 SHEET 2 B10 LYS A 105 VAL A 115 1 O ARG A 108 N GLN A 26 SHEET 3 B10 GLU A 94 ALA A 102 -1 N LEU A 96 O ARG A 111 SHEET 4 B10 ALA A 56 PHE A 62 -1 N PHE A 62 O VAL A 97 SHEET 5 B10 MET A 70 VAL A 76 -1 O ALA A 72 N ILE A 61 SHEET 6 B10 MET B 70 VAL B 76 -1 O SER B 73 N ASP A 75 SHEET 7 B10 ALA B 56 PHE B 62 -1 N ILE B 59 O PHE B 74 SHEET 8 B10 GLU B 94 ALA B 102 -1 O VAL B 97 N PHE B 62 SHEET 9 B10 LYS B 105 VAL B 113 -1 O TYR B 107 N VAL B 100 SHEET 10 B10 ILE B 25 GLU B 27 1 N GLN B 26 O ARG B 108 SHEET 1 C 6 ILE A 31 LYS A 34 0 SHEET 2 C 6 PHE A 44 THR A 51 -1 O THR A 48 N LYS A 34 SHEET 3 C 6 GLU A 83 ARG A 89 -1 O VAL A 84 N VAL A 49 SHEET 4 C 6 GLU B 83 ARG B 89 -1 O SER B 85 N GLU A 83 SHEET 5 C 6 PHE B 44 THR B 51 -1 N VAL B 47 O LEU B 86 SHEET 6 C 6 ILE B 31 LYS B 34 -1 N LYS B 34 O THR B 48 SITE 1 AC1 4 PRO A 36 GLU A 37 HOH A1009 HOH A1016 SITE 1 AC2 3 LYS A 19 ASP A 75 TRP B 2 SITE 1 AC3 6 PRO A 46 VAL A 47 THR A 48 SER A 85 SITE 2 AC3 6 LEU A 86 HOH B 135 SITE 1 AC4 2 ALA A 35 PRO A 46 SITE 1 AC5 4 ASP A 13 ILE A 16 ALA A 17 GLY A 21 CRYST1 40.725 120.114 95.303 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024600 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008300 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010500 0.00000