HEADER MEMBRANE PROTEIN 29-OCT-06 2NPR TITLE STRUCTURAL STUDIES ON PLASMODIUM VIVAX MEROZOITE SURFACE PROTEIN-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEROZOITE SURFACE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 1-90; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX (STRAIN BELEM); SOURCE 3 ORGANISM_TAXID: 31273; SOURCE 4 STRAIN: BELEM; SOURCE 5 GENE: MSP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-30XA/LIC KEYWDS EGF-LIKE DOMAIN, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.J.BABON,W.D.MORGAN,G.KELLY,J.F.ECCLESTON,J.FEENEY,A.A.HOLDER REVDAT 5 27-DEC-23 2NPR 1 REMARK REVDAT 4 16-MAR-22 2NPR 1 REMARK REVDAT 3 24-FEB-09 2NPR 1 VERSN REVDAT 2 24-APR-07 2NPR 1 JRNL REVDAT 1 20-MAR-07 2NPR 0 JRNL AUTH J.J.BABON,W.D.MORGAN,G.KELLY,J.F.ECCLESTON,J.FEENEY, JRNL AUTH 2 A.A.HOLDER JRNL TITL STRUCTURAL STUDIES ON PLASMODIUM VIVAX MEROZOITE SURFACE JRNL TITL 2 PROTEIN-1 JRNL REF MOL.BIOCHEM.PARASITOL. V. 153 31 2007 JRNL REFN ISSN 0166-6851 JRNL PMID 17343930 JRNL DOI 10.1016/J.MOLBIOPARA.2007.01.015 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR, X-PLOR REMARK 3 AUTHORS : BRUNGER (X-PLOR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: XPLOR REMARK 4 REMARK 4 2NPR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000040153. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 20MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : U-13C,15N MSP1; 20MM K-PHOSPHATE REMARK 210 BUFFER(PH 6.5); 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 2D NOESY; 2D REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMMULATED ANNEALING WITH TAD REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 18 H ARG A 30 1.54 REMARK 500 HH21 ARG A 21 O GLY A 25 1.55 REMARK 500 O THR A 49 H ASP A 52 1.56 REMARK 500 O LYS A 64 H VAL A 72 1.57 REMARK 500 H ALA A 18 O ARG A 30 1.57 REMARK 500 O ALA A 45 H ASN A 47 1.58 REMARK 500 O ASN A 54 H GLY A 56 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 2 -67.39 65.37 REMARK 500 1 SER A 3 -39.39 -152.59 REMARK 500 1 SER A 4 42.05 173.85 REMARK 500 1 CYS A 8 159.70 -41.33 REMARK 500 1 ASP A 10 38.56 -170.91 REMARK 500 1 THR A 26 -173.84 -69.24 REMARK 500 1 LEU A 32 -171.43 -61.99 REMARK 500 1 ALA A 45 -75.33 -87.25 REMARK 500 1 SER A 46 -58.08 67.93 REMARK 500 1 ASP A 52 -156.66 -101.53 REMARK 500 1 ASN A 54 102.16 39.80 REMARK 500 1 CYS A 57 -146.96 -94.16 REMARK 500 1 THR A 76 52.31 -160.15 REMARK 500 1 GLU A 78 110.61 55.75 REMARK 500 1 PHE A 84 -75.52 46.04 REMARK 500 1 VAL A 87 -16.39 -49.64 REMARK 500 2 HIS A 6 14.06 58.30 REMARK 500 2 CYS A 8 147.42 -31.18 REMARK 500 2 ASP A 10 34.45 -175.52 REMARK 500 2 ASP A 15 -176.02 -55.46 REMARK 500 2 ASN A 16 29.22 43.58 REMARK 500 2 THR A 26 -173.45 -62.42 REMARK 500 2 LEU A 32 -177.30 -58.22 REMARK 500 2 ALA A 45 -158.16 -119.27 REMARK 500 2 SER A 46 -43.22 170.63 REMARK 500 2 THR A 49 -175.71 -176.39 REMARK 500 2 ASP A 52 -139.33 -100.63 REMARK 500 2 ASN A 54 27.54 37.30 REMARK 500 2 CYS A 57 -145.43 -106.48 REMARK 500 2 THR A 76 43.20 -157.64 REMARK 500 2 GLU A 78 99.80 56.10 REMARK 500 2 PHE A 84 -72.23 42.96 REMARK 500 3 MET A 2 -59.20 -122.92 REMARK 500 3 ASP A 10 31.69 -176.03 REMARK 500 3 ASP A 15 -175.68 -58.77 REMARK 500 3 ASN A 16 27.19 47.17 REMARK 500 3 THR A 26 -174.14 -69.50 REMARK 500 3 LEU A 32 -176.49 -67.64 REMARK 500 3 ALA A 45 -166.34 -109.09 REMARK 500 3 SER A 46 -50.09 -165.21 REMARK 500 3 THR A 49 -175.34 178.43 REMARK 500 3 ASP A 52 -141.95 -117.22 REMARK 500 3 ASN A 54 91.07 38.08 REMARK 500 3 CYS A 57 -149.76 -104.37 REMARK 500 3 THR A 76 36.44 -170.83 REMARK 500 3 LYS A 77 -164.69 -71.98 REMARK 500 3 PHE A 84 -70.71 35.46 REMARK 500 3 VAL A 87 -19.96 -44.65 REMARK 500 4 SER A 3 -85.00 55.63 REMARK 500 4 SER A 4 -60.24 67.09 REMARK 500 REMARK 500 THIS ENTRY HAS 333 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2NPR A 1 90 UNP Q2I7F0 Q2I7F0_PLAVI 1635 1724 SEQRES 1 A 90 THR MET SER SER GLU HIS THR CYS ILE ASP THR ASN VAL SEQRES 2 A 90 PRO ASP ASN ALA ALA CYS TYR ARG TYR LEU ASP GLY THR SEQRES 3 A 90 GLU GLU TRP ARG CYS LEU LEU THR PHE LYS GLU GLU GLY SEQRES 4 A 90 GLY LYS CYS VAL PRO ALA SER ASN VAL THR CYS LYS ASP SEQRES 5 A 90 ASN ASN GLY GLY CYS ALA PRO GLU ALA GLU CYS LYS MET SEQRES 6 A 90 THR ASP SER ASN LYS ILE VAL CYS LYS CYS THR LYS GLU SEQRES 7 A 90 GLY SER GLU PRO LEU PHE GLU GLY VAL PHE CYS SER SHEET 1 A 2 ALA A 17 TYR A 20 0 SHEET 2 A 2 GLU A 28 CYS A 31 -1 O ARG A 30 N ALA A 18 SHEET 1 B 2 PHE A 35 GLU A 37 0 SHEET 2 B 2 CYS A 42 PRO A 44 -1 O VAL A 43 N LYS A 36 SHEET 1 C 2 ALA A 61 MET A 65 0 SHEET 2 C 2 ILE A 71 CYS A 75 -1 O VAL A 72 N LYS A 64 SHEET 1 D 2 GLU A 81 PRO A 82 0 SHEET 2 D 2 CYS A 89 SER A 90 -1 O SER A 90 N GLU A 81 SSBOND 1 CYS A 8 CYS A 19 1555 1555 2.02 SSBOND 2 CYS A 31 CYS A 42 1555 1555 2.02 SSBOND 3 CYS A 50 CYS A 63 1555 1555 2.02 SSBOND 4 CYS A 57 CYS A 73 1555 1555 2.02 SSBOND 5 CYS A 75 CYS A 89 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1