data_2NU5 # _entry.id 2NU5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2NU5 pdb_00002nu5 10.2210/pdb2nu5/pdb RCSB RCSB040305 ? ? WWPDB D_1000040305 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2GTY . unspecified PDB 2GUX . unspecified PDB 2GUE 'The same complex obtained by soaking N-acetylglucosamine into a protein crystal' unspecified PDB 2GUC . unspecified PDB 2GUD . unspecified PDB 2HYR . unspecified PDB 2NUO . unspecified # _pdbx_database_status.entry_id 2NU5 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.recvd_initial_deposition_date 2006-11-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ziolkowska, N.E.' 1 'Wlodawer, A.' 2 # _citation.id primary _citation.title 'Crystallographic studies of the complexes of antiviral protein griffithsin with glucose and N-acetylglucosamine' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 16 _citation.page_first 1485 _citation.page_last 1489 _citation.year 2007 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17567736 _citation.pdbx_database_id_DOI 10.1110/ps.072889407 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ziolkowska, N.E.' 1 ? primary 'Shenoy, S.R.' 2 ? primary ;O'Keefe, B.R. ; 3 ? primary 'Wlodawer, A.' 4 ? # _cell.entry_id 2NU5 _cell.length_a 37.570 _cell.length_b 53.410 _cell.length_c 104.010 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2NU5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man griffithsin 12726.842 2 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 6 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 327 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name GRFT # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(ACE)SLTHRKFGGSGGSPFSGLSSIAVRSGSYLDAIIIDGVHHGGSGGNLSPTFTFGSGEYISNMTIRSGDYIDNISFE TNMGRRFGPYGGSGGSANTLSNVKVIQINGSAGDYLDSLDIYYEQY ; _entity_poly.pdbx_seq_one_letter_code_can ;XSLTHRKFGGSGGSPFSGLSSIAVRSGSYLDAIIIDGVHHGGSGGNLSPTFTFGSGEYISNMTIRSGDYIDNISFETNMG RRFGPYGGSGGSANTLSNVKVIQINGSAGDYLDSLDIYYEQY ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 LEU n 1 4 THR n 1 5 HIS n 1 6 ARG n 1 7 LYS n 1 8 PHE n 1 9 GLY n 1 10 GLY n 1 11 SER n 1 12 GLY n 1 13 GLY n 1 14 SER n 1 15 PRO n 1 16 PHE n 1 17 SER n 1 18 GLY n 1 19 LEU n 1 20 SER n 1 21 SER n 1 22 ILE n 1 23 ALA n 1 24 VAL n 1 25 ARG n 1 26 SER n 1 27 GLY n 1 28 SER n 1 29 TYR n 1 30 LEU n 1 31 ASP n 1 32 ALA n 1 33 ILE n 1 34 ILE n 1 35 ILE n 1 36 ASP n 1 37 GLY n 1 38 VAL n 1 39 HIS n 1 40 HIS n 1 41 GLY n 1 42 GLY n 1 43 SER n 1 44 GLY n 1 45 GLY n 1 46 ASN n 1 47 LEU n 1 48 SER n 1 49 PRO n 1 50 THR n 1 51 PHE n 1 52 THR n 1 53 PHE n 1 54 GLY n 1 55 SER n 1 56 GLY n 1 57 GLU n 1 58 TYR n 1 59 ILE n 1 60 SER n 1 61 ASN n 1 62 MET n 1 63 THR n 1 64 ILE n 1 65 ARG n 1 66 SER n 1 67 GLY n 1 68 ASP n 1 69 TYR n 1 70 ILE n 1 71 ASP n 1 72 ASN n 1 73 ILE n 1 74 SER n 1 75 PHE n 1 76 GLU n 1 77 THR n 1 78 ASN n 1 79 MET n 1 80 GLY n 1 81 ARG n 1 82 ARG n 1 83 PHE n 1 84 GLY n 1 85 PRO n 1 86 TYR n 1 87 GLY n 1 88 GLY n 1 89 SER n 1 90 GLY n 1 91 GLY n 1 92 SER n 1 93 ALA n 1 94 ASN n 1 95 THR n 1 96 LEU n 1 97 SER n 1 98 ASN n 1 99 VAL n 1 100 LYS n 1 101 VAL n 1 102 ILE n 1 103 GLN n 1 104 ILE n 1 105 ASN n 1 106 GLY n 1 107 SER n 1 108 ALA n 1 109 GLY n 1 110 ASP n 1 111 TYR n 1 112 LEU n 1 113 ASP n 1 114 SER n 1 115 LEU n 1 116 ASP n 1 117 ILE n 1 118 TYR n 1 119 TYR n 1 120 GLU n 1 121 GLN n 1 122 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Griffithsia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Q66D336 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Griffithsia sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 373036 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Nicotiana benthamiana' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4100 _entity_src_gen.host_org_genus Nicotiana _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code GRFIN_GRISQ _struct_ref.pdbx_db_accession P84801 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SLTHRKFGGSGGSPFSGLSSIAVRSGSYLDAIIIDGVHHGGSGGNLSPTFTFGSGEYISNMTIRSGDYIDNISFETNMGR RFGPYGGSGGSANTLSNVKVIQINGSAGDYLDSLDIYYEQY ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NU5 A 2 ? 122 ? P84801 1 ? 121 ? 1 121 2 1 2NU5 B 2 ? 122 ? P84801 1 ? 121 ? 1 121 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2NU5 ACE A 1 ? UNP P84801 ? ? acetylation 0 1 2 2NU5 ACE B 1 ? UNP P84801 ? ? acetylation 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2NU5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 39.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;1.8M magnesium sulfate, 0.1M MES, 1:10 ratio of griffithsin monomers to N-acetylglucosamine, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2006-06-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2NU5 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 1.564 _reflns.d_resolution_low 50.00 _reflns.number_all 30231 _reflns.number_obs 30231 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.564 _reflns_shell.d_res_low 1.62 _reflns_shell.percent_possible_all 92.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2NU5 _refine.ls_number_reflns_obs 28639 _refine.ls_number_reflns_all 30231 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.564 _refine.ls_percent_reflns_obs 99.36 _refine.ls_R_factor_obs 0.16507 _refine.ls_R_factor_all 0.16507 _refine.ls_R_factor_R_work 0.16294 _refine.ls_R_factor_R_free 0.20512 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1531 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 14.397 _refine.aniso_B[1][1] -0.08 _refine.aniso_B[2][2] -0.66 _refine.aniso_B[3][3] 0.74 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 2GUC _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.090 _refine.pdbx_overall_ESU_R_Free 0.093 _refine.overall_SU_ML 0.060 _refine.overall_SU_B 3.184 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1798 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 105 _refine_hist.number_atoms_solvent 327 _refine_hist.number_atoms_total 2230 _refine_hist.d_res_high 1.564 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.021 ? 2020 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.935 2.006 ? 2728 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.200 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 42.907 23.820 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.778 15.000 ? 317 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.648 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.177 0.200 ? 296 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 1508 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.276 0.200 ? 874 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.316 0.200 ? 1403 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.349 0.200 ? 282 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.218 0.200 ? 49 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.264 0.200 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.436 1.500 ? 1208 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.888 2.000 ? 1917 'X-RAY DIFFRACTION' ? r_scbond_it 3.383 3.000 ? 895 'X-RAY DIFFRACTION' ? r_scangle_it 4.636 4.500 ? 808 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.564 _refine_ls_shell.d_res_low 1.604 _refine_ls_shell.number_reflns_R_work 2007 _refine_ls_shell.R_factor_R_work 0.243 _refine_ls_shell.percent_reflns_obs 96.96 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2NU5 _struct.title 'Crystal structure of a complex of griffithsin cocrystallized with N-acetylglucosamine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NU5 _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN,SUGAR BINDING PROTEIN' _struct_keywords.text 'griffithsin; lectins; domain swapping; mannose binding; HIV; SARS, ANTIVIRAL PROTEIN, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? A ACE 0 A SER 1 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? B ACE 1 C ? ? ? 1_555 B SER 2 N ? ? B ACE 0 B SER 1 1_555 ? ? ? ? ? ? ? 1.312 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 84 A . ? GLY 83 A PRO 85 A ? PRO 84 A 1 8.41 2 GLY 84 B . ? GLY 83 B PRO 85 B ? PRO 84 B 1 6.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 3 ? GLY A 9 ? LEU A 2 GLY A 8 A 2 LEU B 112 ? GLN B 121 ? LEU B 111 GLN B 120 A 3 VAL B 99 ? ALA B 108 ? VAL B 98 ALA B 107 A 4 SER A 14 ? PHE A 16 ? SER A 13 PHE A 15 B 1 VAL A 38 ? GLY A 41 ? VAL A 37 GLY A 40 B 2 LEU A 30 ? ILE A 35 ? LEU A 29 ILE A 34 B 3 SER A 21 ? SER A 26 ? SER A 20 SER A 25 B 4 ASN A 46 ? LEU A 47 ? ASN A 45 LEU A 46 C 1 VAL A 38 ? GLY A 41 ? VAL A 37 GLY A 40 C 2 LEU A 30 ? ILE A 35 ? LEU A 29 ILE A 34 C 3 SER A 21 ? SER A 26 ? SER A 20 SER A 25 C 4 PHE A 51 ? THR A 52 ? PHE A 50 THR A 51 D 1 ARG A 82 ? GLY A 87 ? ARG A 81 GLY A 86 D 2 ILE A 70 ? THR A 77 ? ILE A 69 THR A 76 D 3 ILE A 59 ? SER A 66 ? ILE A 58 SER A 65 D 4 SER A 92 ? SER A 97 ? SER A 91 SER A 96 E 1 SER B 2 ? GLY B 9 ? SER B 1 GLY B 8 E 2 LEU A 112 ? GLN A 121 ? LEU A 111 GLN A 120 E 3 VAL A 99 ? ALA A 108 ? VAL A 98 ALA A 107 E 4 SER B 14 ? PHE B 16 ? SER B 13 PHE B 15 F 1 VAL B 38 ? GLY B 41 ? VAL B 37 GLY B 40 F 2 LEU B 30 ? ILE B 35 ? LEU B 29 ILE B 34 F 3 SER B 21 ? SER B 26 ? SER B 20 SER B 25 F 4 ASN B 46 ? LEU B 47 ? ASN B 45 LEU B 46 G 1 VAL B 38 ? GLY B 41 ? VAL B 37 GLY B 40 G 2 LEU B 30 ? ILE B 35 ? LEU B 29 ILE B 34 G 3 SER B 21 ? SER B 26 ? SER B 20 SER B 25 G 4 PHE B 51 ? THR B 52 ? PHE B 50 THR B 51 H 1 ARG B 82 ? GLY B 87 ? ARG B 81 GLY B 86 H 2 ILE B 70 ? THR B 77 ? ILE B 69 THR B 76 H 3 ILE B 59 ? SER B 66 ? ILE B 58 SER B 65 H 4 SER B 92 ? SER B 97 ? SER B 91 SER B 96 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 6 ? N ARG A 5 O ILE B 117 ? O ILE B 116 A 2 3 O TYR B 118 ? O TYR B 117 N ILE B 102 ? N ILE B 101 A 3 4 O GLY B 106 ? O GLY B 105 N PHE A 16 ? N PHE A 15 B 1 2 O HIS A 40 ? O HIS A 39 N ILE A 33 ? N ILE A 32 B 2 3 O ILE A 34 ? O ILE A 33 N ALA A 23 ? N ALA A 22 B 3 4 N SER A 26 ? N SER A 25 O ASN A 46 ? O ASN A 45 C 1 2 O HIS A 40 ? O HIS A 39 N ILE A 33 ? N ILE A 32 C 2 3 O ILE A 34 ? O ILE A 33 N ALA A 23 ? N ALA A 22 C 3 4 N ILE A 22 ? N ILE A 21 O PHE A 51 ? O PHE A 50 D 1 2 O PHE A 83 ? O PHE A 82 N PHE A 75 ? N PHE A 74 D 2 3 O GLU A 76 ? O GLU A 75 N ASN A 61 ? N ASN A 60 D 3 4 N ILE A 64 ? N ILE A 63 O ASN A 94 ? O ASN A 93 E 1 2 O THR B 4 ? O THR B 3 N TYR A 119 ? N TYR A 118 E 2 3 O TYR A 118 ? O TYR A 117 N ILE A 102 ? N ILE A 101 E 3 4 N ALA A 108 ? N ALA A 107 O SER B 14 ? O SER B 13 F 1 2 O HIS B 40 ? O HIS B 39 N ILE B 33 ? N ILE B 32 F 2 3 O ILE B 34 ? O ILE B 33 N ALA B 23 ? N ALA B 22 F 3 4 N SER B 26 ? N SER B 25 O ASN B 46 ? O ASN B 45 G 1 2 O HIS B 40 ? O HIS B 39 N ILE B 33 ? N ILE B 32 G 2 3 O ILE B 34 ? O ILE B 33 N ALA B 23 ? N ALA B 22 G 3 4 N ILE B 22 ? N ILE B 21 O PHE B 51 ? O PHE B 50 H 1 2 O PHE B 83 ? O PHE B 82 N PHE B 75 ? N PHE B 74 H 2 3 O SER B 74 ? O SER B 73 N THR B 63 ? N THR B 62 H 3 4 N ILE B 64 ? N ILE B 63 O ASN B 94 ? O ASN B 93 # _atom_sites.entry_id 2NU5 _atom_sites.fract_transf_matrix[1][1] 0.026617 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018723 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009614 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'THR B 3 HAS WRONG CHIRALITY AT ATOM CB' 2 'NAG A 122 HAS WRONG CHIRALITY AT ATOM C1' 3 'NAG A 123 HAS WRONG CHIRALITY AT ATOM C1' 4 'NAG A 124 HAS WRONG CHIRALITY AT ATOM C1' 5 'NAG B 122 HAS WRONG CHIRALITY AT ATOM C1' 6 'NAG B 123 HAS WRONG CHIRALITY AT ATOM C1' 7 'NAG B 124 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 LEU 3 2 2 LEU LEU A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 HIS 5 4 4 HIS HIS A . n A 1 6 ARG 6 5 5 ARG ARG A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 PHE 8 7 7 PHE PHE A . n A 1 9 GLY 9 8 8 GLY GLY A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 SER 11 10 10 SER SER A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 SER 14 13 13 SER SER A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 PHE 16 15 15 PHE PHE A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 ARG 25 24 24 ARG ARG A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 GLY 27 26 26 GLY GLY A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 ILE 34 33 33 ILE ILE A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 HIS 39 38 38 HIS HIS A . n A 1 40 HIS 40 39 39 HIS HIS A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 ASN 46 45 45 ASN ASN A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 PRO 49 48 48 PRO PRO A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 PHE 51 50 50 PHE PHE A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 TYR 58 57 57 TYR TYR A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 SER 60 59 59 SER SER A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 MET 62 61 61 MET MET A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 ILE 64 63 63 ILE ILE A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 ASN 72 71 71 ASN ASN A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 SER 74 73 73 SER SER A . n A 1 75 PHE 75 74 74 PHE PHE A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 ASN 78 77 77 ASN ASN A . n A 1 79 MET 79 78 78 MET MET A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 PRO 85 84 84 PRO PRO A . n A 1 86 TYR 86 85 85 TYR TYR A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 THR 95 94 94 THR THR A . n A 1 96 LEU 96 95 95 LEU LEU A . n A 1 97 SER 97 96 96 SER SER A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 VAL 99 98 98 VAL VAL A . n A 1 100 LYS 100 99 99 LYS LYS A . n A 1 101 VAL 101 100 100 VAL VAL A . n A 1 102 ILE 102 101 101 ILE ILE A . n A 1 103 GLN 103 102 102 GLN GLN A . n A 1 104 ILE 104 103 103 ILE ILE A . n A 1 105 ASN 105 104 104 ASN ASN A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 TYR 111 110 110 TYR TYR A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 SER 114 113 113 SER SER A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 ILE 117 116 116 ILE ILE A . n A 1 118 TYR 118 117 117 TYR TYR A . n A 1 119 TYR 119 118 118 TYR TYR A . n A 1 120 GLU 120 119 119 GLU GLU A . n A 1 121 GLN 121 120 120 GLN GLN A . n A 1 122 TYR 122 121 121 TYR TYR A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 SER 2 1 1 SER SER B . n B 1 3 LEU 3 2 2 LEU LEU B . n B 1 4 THR 4 3 3 THR THR B . n B 1 5 HIS 5 4 4 HIS HIS B . n B 1 6 ARG 6 5 5 ARG ARG B . n B 1 7 LYS 7 6 6 LYS LYS B . n B 1 8 PHE 8 7 7 PHE PHE B . n B 1 9 GLY 9 8 8 GLY GLY B . n B 1 10 GLY 10 9 9 GLY GLY B . n B 1 11 SER 11 10 10 SER SER B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 GLY 13 12 12 GLY GLY B . n B 1 14 SER 14 13 13 SER SER B . n B 1 15 PRO 15 14 14 PRO PRO B . n B 1 16 PHE 16 15 15 PHE PHE B . n B 1 17 SER 17 16 16 SER SER B . n B 1 18 GLY 18 17 17 GLY GLY B . n B 1 19 LEU 19 18 18 LEU LEU B . n B 1 20 SER 20 19 19 SER SER B . n B 1 21 SER 21 20 20 SER SER B . n B 1 22 ILE 22 21 21 ILE ILE B . n B 1 23 ALA 23 22 22 ALA ALA B . n B 1 24 VAL 24 23 23 VAL VAL B . n B 1 25 ARG 25 24 24 ARG ARG B . n B 1 26 SER 26 25 25 SER SER B . n B 1 27 GLY 27 26 26 GLY GLY B . n B 1 28 SER 28 27 27 SER SER B . n B 1 29 TYR 29 28 28 TYR TYR B . n B 1 30 LEU 30 29 29 LEU LEU B . n B 1 31 ASP 31 30 30 ASP ASP B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 ILE 33 32 32 ILE ILE B . n B 1 34 ILE 34 33 33 ILE ILE B . n B 1 35 ILE 35 34 34 ILE ILE B . n B 1 36 ASP 36 35 35 ASP ASP B . n B 1 37 GLY 37 36 36 GLY GLY B . n B 1 38 VAL 38 37 37 VAL VAL B . n B 1 39 HIS 39 38 38 HIS HIS B . n B 1 40 HIS 40 39 39 HIS HIS B . n B 1 41 GLY 41 40 40 GLY GLY B . n B 1 42 GLY 42 41 41 GLY GLY B . n B 1 43 SER 43 42 42 SER SER B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 GLY 45 44 44 GLY GLY B . n B 1 46 ASN 46 45 45 ASN ASN B . n B 1 47 LEU 47 46 46 LEU LEU B . n B 1 48 SER 48 47 47 SER SER B . n B 1 49 PRO 49 48 48 PRO PRO B . n B 1 50 THR 50 49 49 THR THR B . n B 1 51 PHE 51 50 50 PHE PHE B . n B 1 52 THR 52 51 51 THR THR B . n B 1 53 PHE 53 52 52 PHE PHE B . n B 1 54 GLY 54 53 53 GLY GLY B . n B 1 55 SER 55 54 54 SER SER B . n B 1 56 GLY 56 55 55 GLY GLY B . n B 1 57 GLU 57 56 56 GLU GLU B . n B 1 58 TYR 58 57 57 TYR TYR B . n B 1 59 ILE 59 58 58 ILE ILE B . n B 1 60 SER 60 59 59 SER SER B . n B 1 61 ASN 61 60 60 ASN ASN B . n B 1 62 MET 62 61 61 MET MET B . n B 1 63 THR 63 62 62 THR THR B . n B 1 64 ILE 64 63 63 ILE ILE B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 SER 66 65 65 SER SER B . n B 1 67 GLY 67 66 66 GLY GLY B . n B 1 68 ASP 68 67 67 ASP ASP B . n B 1 69 TYR 69 68 68 TYR TYR B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 ASP 71 70 70 ASP ASP B . n B 1 72 ASN 72 71 71 ASN ASN B . n B 1 73 ILE 73 72 72 ILE ILE B . n B 1 74 SER 74 73 73 SER SER B . n B 1 75 PHE 75 74 74 PHE PHE B . n B 1 76 GLU 76 75 75 GLU GLU B . n B 1 77 THR 77 76 76 THR THR B . n B 1 78 ASN 78 77 77 ASN ASN B . n B 1 79 MET 79 78 78 MET MET B . n B 1 80 GLY 80 79 79 GLY GLY B . n B 1 81 ARG 81 80 80 ARG ARG B . n B 1 82 ARG 82 81 81 ARG ARG B . n B 1 83 PHE 83 82 82 PHE PHE B . n B 1 84 GLY 84 83 83 GLY GLY B . n B 1 85 PRO 85 84 84 PRO PRO B . n B 1 86 TYR 86 85 85 TYR TYR B . n B 1 87 GLY 87 86 86 GLY GLY B . n B 1 88 GLY 88 87 87 GLY GLY B . n B 1 89 SER 89 88 88 SER SER B . n B 1 90 GLY 90 89 89 GLY GLY B . n B 1 91 GLY 91 90 90 GLY GLY B . n B 1 92 SER 92 91 91 SER SER B . n B 1 93 ALA 93 92 92 ALA ALA B . n B 1 94 ASN 94 93 93 ASN ASN B . n B 1 95 THR 95 94 94 THR THR B . n B 1 96 LEU 96 95 95 LEU LEU B . n B 1 97 SER 97 96 96 SER SER B . n B 1 98 ASN 98 97 97 ASN ASN B . n B 1 99 VAL 99 98 98 VAL VAL B . n B 1 100 LYS 100 99 99 LYS LYS B . n B 1 101 VAL 101 100 100 VAL VAL B . n B 1 102 ILE 102 101 101 ILE ILE B . n B 1 103 GLN 103 102 102 GLN GLN B . n B 1 104 ILE 104 103 103 ILE ILE B . n B 1 105 ASN 105 104 104 ASN ASN B . n B 1 106 GLY 106 105 105 GLY GLY B . n B 1 107 SER 107 106 106 SER SER B . n B 1 108 ALA 108 107 107 ALA ALA B . n B 1 109 GLY 109 108 108 GLY GLY B . n B 1 110 ASP 110 109 109 ASP ASP B . n B 1 111 TYR 111 110 110 TYR TYR B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 ASP 113 112 112 ASP ASP B . n B 1 114 SER 114 113 113 SER SER B . n B 1 115 LEU 115 114 114 LEU LEU B . n B 1 116 ASP 116 115 115 ASP ASP B . n B 1 117 ILE 117 116 116 ILE ILE B . n B 1 118 TYR 118 117 117 TYR TYR B . n B 1 119 TYR 119 118 118 TYR TYR B . n B 1 120 GLU 120 119 119 GLU GLU B . n B 1 121 GLN 121 120 120 GLN GLN B . n B 1 122 TYR 122 121 121 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 122 1 NAG NAG A . D 2 NAG 1 123 2 NAG NAG A . E 2 NAG 1 124 3 NAG NAG A . F 3 SO4 1 9001 9001 SO4 SO4 A . G 2 NAG 1 122 4 NAG NAG B . H 2 NAG 1 123 5 NAG NAG B . I 2 NAG 1 124 6 NAG NAG B . J 3 SO4 1 9002 9002 SO4 SO4 B . K 3 SO4 1 9003 9003 SO4 SO4 B . L 4 HOH 1 9002 1 HOH HOH A . L 4 HOH 2 9003 3 HOH HOH A . L 4 HOH 3 9004 4 HOH HOH A . L 4 HOH 4 9005 6 HOH HOH A . L 4 HOH 5 9006 7 HOH HOH A . L 4 HOH 6 9007 9 HOH HOH A . L 4 HOH 7 9008 14 HOH HOH A . L 4 HOH 8 9009 15 HOH HOH A . L 4 HOH 9 9010 16 HOH HOH A . L 4 HOH 10 9011 18 HOH HOH A . L 4 HOH 11 9012 20 HOH HOH A . L 4 HOH 12 9013 21 HOH HOH A . L 4 HOH 13 9014 22 HOH HOH A . L 4 HOH 14 9015 23 HOH HOH A . L 4 HOH 15 9016 25 HOH HOH A . L 4 HOH 16 9017 27 HOH HOH A . L 4 HOH 17 9018 28 HOH HOH A . L 4 HOH 18 9019 29 HOH HOH A . L 4 HOH 19 9020 30 HOH HOH A . L 4 HOH 20 9021 35 HOH HOH A . L 4 HOH 21 9022 36 HOH HOH A . L 4 HOH 22 9023 37 HOH HOH A . L 4 HOH 23 9024 38 HOH HOH A . L 4 HOH 24 9025 40 HOH HOH A . L 4 HOH 25 9026 42 HOH HOH A . L 4 HOH 26 9027 43 HOH HOH A . L 4 HOH 27 9028 47 HOH HOH A . L 4 HOH 28 9029 48 HOH HOH A . L 4 HOH 29 9030 50 HOH HOH A . L 4 HOH 30 9031 53 HOH HOH A . L 4 HOH 31 9032 54 HOH HOH A . L 4 HOH 32 9033 58 HOH HOH A . L 4 HOH 33 9034 61 HOH HOH A . L 4 HOH 34 9035 63 HOH HOH A . L 4 HOH 35 9036 66 HOH HOH A . L 4 HOH 36 9037 67 HOH HOH A . L 4 HOH 37 9038 80 HOH HOH A . L 4 HOH 38 9039 82 HOH HOH A . L 4 HOH 39 9040 84 HOH HOH A . L 4 HOH 40 9041 85 HOH HOH A . L 4 HOH 41 9042 87 HOH HOH A . L 4 HOH 42 9043 89 HOH HOH A . L 4 HOH 43 9044 91 HOH HOH A . L 4 HOH 44 9045 92 HOH HOH A . L 4 HOH 45 9046 93 HOH HOH A . L 4 HOH 46 9047 96 HOH HOH A . L 4 HOH 47 9048 99 HOH HOH A . L 4 HOH 48 9049 100 HOH HOH A . L 4 HOH 49 9050 104 HOH HOH A . L 4 HOH 50 9051 105 HOH HOH A . L 4 HOH 51 9052 106 HOH HOH A . L 4 HOH 52 9053 109 HOH HOH A . L 4 HOH 53 9054 112 HOH HOH A . L 4 HOH 54 9055 115 HOH HOH A . L 4 HOH 55 9056 116 HOH HOH A . L 4 HOH 56 9057 117 HOH HOH A . L 4 HOH 57 9058 121 HOH HOH A . L 4 HOH 58 9059 124 HOH HOH A . L 4 HOH 59 9060 125 HOH HOH A . L 4 HOH 60 9061 126 HOH HOH A . L 4 HOH 61 9062 127 HOH HOH A . L 4 HOH 62 9063 128 HOH HOH A . L 4 HOH 63 9064 131 HOH HOH A . L 4 HOH 64 9065 132 HOH HOH A . L 4 HOH 65 9066 136 HOH HOH A . L 4 HOH 66 9067 138 HOH HOH A . L 4 HOH 67 9068 139 HOH HOH A . L 4 HOH 68 9069 140 HOH HOH A . L 4 HOH 69 9070 142 HOH HOH A . L 4 HOH 70 9071 146 HOH HOH A . L 4 HOH 71 9072 147 HOH HOH A . L 4 HOH 72 9073 148 HOH HOH A . L 4 HOH 73 9074 149 HOH HOH A . L 4 HOH 74 9075 153 HOH HOH A . L 4 HOH 75 9076 154 HOH HOH A . L 4 HOH 76 9077 158 HOH HOH A . L 4 HOH 77 9078 159 HOH HOH A . L 4 HOH 78 9079 162 HOH HOH A . L 4 HOH 79 9080 165 HOH HOH A . L 4 HOH 80 9081 166 HOH HOH A . L 4 HOH 81 9082 167 HOH HOH A . L 4 HOH 82 9083 176 HOH HOH A . L 4 HOH 83 9084 184 HOH HOH A . L 4 HOH 84 9085 185 HOH HOH A . L 4 HOH 85 9086 189 HOH HOH A . L 4 HOH 86 9087 191 HOH HOH A . L 4 HOH 87 9088 193 HOH HOH A . L 4 HOH 88 9089 195 HOH HOH A . L 4 HOH 89 9090 196 HOH HOH A . L 4 HOH 90 9091 197 HOH HOH A . L 4 HOH 91 9092 198 HOH HOH A . L 4 HOH 92 9093 199 HOH HOH A . L 4 HOH 93 9094 200 HOH HOH A . L 4 HOH 94 9095 201 HOH HOH A . L 4 HOH 95 9096 202 HOH HOH A . L 4 HOH 96 9097 203 HOH HOH A . L 4 HOH 97 9098 204 HOH HOH A . L 4 HOH 98 9099 205 HOH HOH A . L 4 HOH 99 9100 207 HOH HOH A . L 4 HOH 100 9101 214 HOH HOH A . L 4 HOH 101 9102 215 HOH HOH A . L 4 HOH 102 9103 220 HOH HOH A . L 4 HOH 103 9104 221 HOH HOH A . L 4 HOH 104 9105 225 HOH HOH A . L 4 HOH 105 9106 228 HOH HOH A . L 4 HOH 106 9107 229 HOH HOH A . L 4 HOH 107 9108 230 HOH HOH A . L 4 HOH 108 9109 232 HOH HOH A . L 4 HOH 109 9110 233 HOH HOH A . L 4 HOH 110 9111 234 HOH HOH A . L 4 HOH 111 9112 235 HOH HOH A . L 4 HOH 112 9113 236 HOH HOH A . L 4 HOH 113 9114 237 HOH HOH A . L 4 HOH 114 9115 238 HOH HOH A . L 4 HOH 115 9116 239 HOH HOH A . L 4 HOH 116 9117 241 HOH HOH A . L 4 HOH 117 9118 242 HOH HOH A . L 4 HOH 118 9119 243 HOH HOH A . L 4 HOH 119 9120 245 HOH HOH A . L 4 HOH 120 9121 247 HOH HOH A . L 4 HOH 121 9122 249 HOH HOH A . L 4 HOH 122 9123 250 HOH HOH A . L 4 HOH 123 9124 251 HOH HOH A . L 4 HOH 124 9125 252 HOH HOH A . L 4 HOH 125 9126 256 HOH HOH A . L 4 HOH 126 9127 258 HOH HOH A . L 4 HOH 127 9128 261 HOH HOH A . L 4 HOH 128 9129 262 HOH HOH A . L 4 HOH 129 9130 263 HOH HOH A . L 4 HOH 130 9131 265 HOH HOH A . L 4 HOH 131 9132 266 HOH HOH A . L 4 HOH 132 9133 269 HOH HOH A . L 4 HOH 133 9134 271 HOH HOH A . L 4 HOH 134 9135 275 HOH HOH A . L 4 HOH 135 9136 276 HOH HOH A . L 4 HOH 136 9137 279 HOH HOH A . L 4 HOH 137 9138 281 HOH HOH A . L 4 HOH 138 9139 285 HOH HOH A . L 4 HOH 139 9140 286 HOH HOH A . L 4 HOH 140 9141 287 HOH HOH A . L 4 HOH 141 9142 290 HOH HOH A . L 4 HOH 142 9143 293 HOH HOH A . L 4 HOH 143 9144 295 HOH HOH A . L 4 HOH 144 9145 297 HOH HOH A . L 4 HOH 145 9146 298 HOH HOH A . L 4 HOH 146 9147 299 HOH HOH A . L 4 HOH 147 9148 300 HOH HOH A . L 4 HOH 148 9149 302 HOH HOH A . L 4 HOH 149 9150 303 HOH HOH A . L 4 HOH 150 9151 305 HOH HOH A . L 4 HOH 151 9152 306 HOH HOH A . L 4 HOH 152 9153 307 HOH HOH A . L 4 HOH 153 9154 308 HOH HOH A . L 4 HOH 154 9155 316 HOH HOH A . L 4 HOH 155 9156 317 HOH HOH A . L 4 HOH 156 9157 318 HOH HOH A . L 4 HOH 157 9158 319 HOH HOH A . L 4 HOH 158 9159 320 HOH HOH A . L 4 HOH 159 9160 323 HOH HOH A . L 4 HOH 160 9161 325 HOH HOH A . L 4 HOH 161 9162 326 HOH HOH A . M 4 HOH 1 9004 2 HOH HOH B . M 4 HOH 2 9005 5 HOH HOH B . M 4 HOH 3 9006 8 HOH HOH B . M 4 HOH 4 9007 10 HOH HOH B . M 4 HOH 5 9008 11 HOH HOH B . M 4 HOH 6 9009 12 HOH HOH B . M 4 HOH 7 9010 13 HOH HOH B . M 4 HOH 8 9011 17 HOH HOH B . M 4 HOH 9 9012 19 HOH HOH B . M 4 HOH 10 9013 24 HOH HOH B . M 4 HOH 11 9014 26 HOH HOH B . M 4 HOH 12 9015 31 HOH HOH B . M 4 HOH 13 9016 32 HOH HOH B . M 4 HOH 14 9017 33 HOH HOH B . M 4 HOH 15 9018 34 HOH HOH B . M 4 HOH 16 9019 39 HOH HOH B . M 4 HOH 17 9020 41 HOH HOH B . M 4 HOH 18 9021 44 HOH HOH B . M 4 HOH 19 9022 45 HOH HOH B . M 4 HOH 20 9023 46 HOH HOH B . M 4 HOH 21 9024 49 HOH HOH B . M 4 HOH 22 9025 51 HOH HOH B . M 4 HOH 23 9026 52 HOH HOH B . M 4 HOH 24 9027 55 HOH HOH B . M 4 HOH 25 9028 56 HOH HOH B . M 4 HOH 26 9029 57 HOH HOH B . M 4 HOH 27 9030 59 HOH HOH B . M 4 HOH 28 9031 60 HOH HOH B . M 4 HOH 29 9032 62 HOH HOH B . M 4 HOH 30 9033 64 HOH HOH B . M 4 HOH 31 9034 65 HOH HOH B . M 4 HOH 32 9035 68 HOH HOH B . M 4 HOH 33 9036 69 HOH HOH B . M 4 HOH 34 9037 70 HOH HOH B . M 4 HOH 35 9038 71 HOH HOH B . M 4 HOH 36 9039 72 HOH HOH B . M 4 HOH 37 9040 73 HOH HOH B . M 4 HOH 38 9041 74 HOH HOH B . M 4 HOH 39 9042 75 HOH HOH B . M 4 HOH 40 9043 76 HOH HOH B . M 4 HOH 41 9044 77 HOH HOH B . M 4 HOH 42 9045 78 HOH HOH B . M 4 HOH 43 9046 79 HOH HOH B . M 4 HOH 44 9047 81 HOH HOH B . M 4 HOH 45 9048 83 HOH HOH B . M 4 HOH 46 9049 86 HOH HOH B . M 4 HOH 47 9050 88 HOH HOH B . M 4 HOH 48 9051 90 HOH HOH B . M 4 HOH 49 9052 94 HOH HOH B . M 4 HOH 50 9053 95 HOH HOH B . M 4 HOH 51 9054 97 HOH HOH B . M 4 HOH 52 9055 98 HOH HOH B . M 4 HOH 53 9056 101 HOH HOH B . M 4 HOH 54 9057 102 HOH HOH B . M 4 HOH 55 9058 103 HOH HOH B . M 4 HOH 56 9059 107 HOH HOH B . M 4 HOH 57 9060 108 HOH HOH B . M 4 HOH 58 9061 110 HOH HOH B . M 4 HOH 59 9062 111 HOH HOH B . M 4 HOH 60 9063 113 HOH HOH B . M 4 HOH 61 9064 114 HOH HOH B . M 4 HOH 62 9065 118 HOH HOH B . M 4 HOH 63 9066 119 HOH HOH B . M 4 HOH 64 9067 120 HOH HOH B . M 4 HOH 65 9068 122 HOH HOH B . M 4 HOH 66 9069 123 HOH HOH B . M 4 HOH 67 9070 129 HOH HOH B . M 4 HOH 68 9071 130 HOH HOH B . M 4 HOH 69 9072 133 HOH HOH B . M 4 HOH 70 9073 134 HOH HOH B . M 4 HOH 71 9074 135 HOH HOH B . M 4 HOH 72 9075 137 HOH HOH B . M 4 HOH 73 9076 141 HOH HOH B . M 4 HOH 74 9077 143 HOH HOH B . M 4 HOH 75 9078 144 HOH HOH B . M 4 HOH 76 9079 145 HOH HOH B . M 4 HOH 77 9080 150 HOH HOH B . M 4 HOH 78 9081 151 HOH HOH B . M 4 HOH 79 9082 152 HOH HOH B . M 4 HOH 80 9083 155 HOH HOH B . M 4 HOH 81 9084 156 HOH HOH B . M 4 HOH 82 9085 157 HOH HOH B . M 4 HOH 83 9086 160 HOH HOH B . M 4 HOH 84 9087 161 HOH HOH B . M 4 HOH 85 9088 163 HOH HOH B . M 4 HOH 86 9089 164 HOH HOH B . M 4 HOH 87 9090 168 HOH HOH B . M 4 HOH 88 9091 169 HOH HOH B . M 4 HOH 89 9092 170 HOH HOH B . M 4 HOH 90 9093 171 HOH HOH B . M 4 HOH 91 9094 172 HOH HOH B . M 4 HOH 92 9095 173 HOH HOH B . M 4 HOH 93 9096 174 HOH HOH B . M 4 HOH 94 9097 175 HOH HOH B . M 4 HOH 95 9098 177 HOH HOH B . M 4 HOH 96 9099 178 HOH HOH B . M 4 HOH 97 9100 179 HOH HOH B . M 4 HOH 98 9101 180 HOH HOH B . M 4 HOH 99 9102 181 HOH HOH B . M 4 HOH 100 9103 182 HOH HOH B . M 4 HOH 101 9104 183 HOH HOH B . M 4 HOH 102 9105 186 HOH HOH B . M 4 HOH 103 9106 187 HOH HOH B . M 4 HOH 104 9107 188 HOH HOH B . M 4 HOH 105 9108 190 HOH HOH B . M 4 HOH 106 9109 192 HOH HOH B . M 4 HOH 107 9110 194 HOH HOH B . M 4 HOH 108 9111 206 HOH HOH B . M 4 HOH 109 9112 208 HOH HOH B . M 4 HOH 110 9113 209 HOH HOH B . M 4 HOH 111 9114 210 HOH HOH B . M 4 HOH 112 9115 211 HOH HOH B . M 4 HOH 113 9116 212 HOH HOH B . M 4 HOH 114 9117 213 HOH HOH B . M 4 HOH 115 9118 216 HOH HOH B . M 4 HOH 116 9119 217 HOH HOH B . M 4 HOH 117 9120 218 HOH HOH B . M 4 HOH 118 9121 219 HOH HOH B . M 4 HOH 119 9122 222 HOH HOH B . M 4 HOH 120 9123 223 HOH HOH B . M 4 HOH 121 9124 224 HOH HOH B . M 4 HOH 122 9125 226 HOH HOH B . M 4 HOH 123 9126 227 HOH HOH B . M 4 HOH 124 9127 231 HOH HOH B . M 4 HOH 125 9128 240 HOH HOH B . M 4 HOH 126 9129 244 HOH HOH B . M 4 HOH 127 9130 246 HOH HOH B . M 4 HOH 128 9131 248 HOH HOH B . M 4 HOH 129 9132 253 HOH HOH B . M 4 HOH 130 9133 254 HOH HOH B . M 4 HOH 131 9134 255 HOH HOH B . M 4 HOH 132 9135 257 HOH HOH B . M 4 HOH 133 9136 259 HOH HOH B . M 4 HOH 134 9137 260 HOH HOH B . M 4 HOH 135 9138 264 HOH HOH B . M 4 HOH 136 9139 267 HOH HOH B . M 4 HOH 137 9140 268 HOH HOH B . M 4 HOH 138 9141 270 HOH HOH B . M 4 HOH 139 9142 272 HOH HOH B . M 4 HOH 140 9143 273 HOH HOH B . M 4 HOH 141 9144 274 HOH HOH B . M 4 HOH 142 9145 277 HOH HOH B . M 4 HOH 143 9146 278 HOH HOH B . M 4 HOH 144 9147 280 HOH HOH B . M 4 HOH 145 9148 282 HOH HOH B . M 4 HOH 146 9149 283 HOH HOH B . M 4 HOH 147 9150 284 HOH HOH B . M 4 HOH 148 9151 288 HOH HOH B . M 4 HOH 149 9152 289 HOH HOH B . M 4 HOH 150 9153 291 HOH HOH B . M 4 HOH 151 9154 292 HOH HOH B . M 4 HOH 152 9155 294 HOH HOH B . M 4 HOH 153 9156 296 HOH HOH B . M 4 HOH 154 9157 301 HOH HOH B . M 4 HOH 155 9158 304 HOH HOH B . M 4 HOH 156 9159 309 HOH HOH B . M 4 HOH 157 9160 310 HOH HOH B . M 4 HOH 158 9161 311 HOH HOH B . M 4 HOH 159 9162 312 HOH HOH B . M 4 HOH 160 9163 313 HOH HOH B . M 4 HOH 161 9164 314 HOH HOH B . M 4 HOH 162 9165 315 HOH HOH B . M 4 HOH 163 9166 321 HOH HOH B . M 4 HOH 164 9167 322 HOH HOH B . M 4 HOH 165 9168 324 HOH HOH B . M 4 HOH 166 9169 327 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6600 ? 1 MORE -50 ? 1 'SSA (A^2)' 10860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-18 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-08-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Source and taxonomy' 4 2 'Structure model' 'Version format compliance' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' Advisory 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Structure summary' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Refinement description' 14 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' entity 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen 11 5 'Structure model' chem_comp 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' database_2 15 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_chem_comp.pdbx_synonyms' 9 5 'Structure model' '_database_2.pdbx_DOI' 10 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 22.4503 2.0476 6.3921 -0.0087 -0.0141 0.0011 -0.0002 0.0042 0.0015 0.1362 0.0366 0.4882 -0.0091 0.0137 0.0818 0.0037 -0.0198 -0.0120 -0.0019 0.0003 -0.0066 -0.0335 0.0085 -0.0039 'X-RAY DIFFRACTION' 2 ? refined 15.0033 -2.0301 -11.8476 -0.0080 -0.0132 0.0027 -0.0004 0.0030 0.0024 0.1037 0.0967 0.2766 0.0070 0.0346 -0.0198 -0.0057 0.0118 -0.0061 -0.0010 0.0028 0.0012 -0.0045 -0.0065 0.0029 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 2 A 121 A 122 ? 'X-RAY DIFFRACTION' ? 2 2 B 1 B 2 B 121 B 122 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' 'CCD program' ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2 ? 3 DENZO 'data reduction' '(HKL-2000)' ? 4 SCALEPACK 'data scaling' '(HKL-2000)' ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 9049 ? ? O A HOH 9153 ? ? 2.00 2 1 O B HOH 9144 ? ? O B HOH 9145 ? ? 2.02 3 1 OG B SER 1 ? A O B HOH 9138 ? ? 2.07 4 1 O A HOH 9049 ? ? O A HOH 9113 ? ? 2.09 5 1 OD2 A ASP 115 ? B O A HOH 9020 ? ? 2.15 6 1 O B HOH 9132 ? ? O B HOH 9144 ? ? 2.15 7 1 OG B SER 16 ? B O B HOH 9143 ? ? 2.15 8 1 O A HOH 9049 ? ? O A HOH 9152 ? ? 2.17 9 1 OG B SER 54 ? ? O B HOH 9144 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 9106 ? ? 1_555 O B HOH 9068 ? ? 4_445 1.97 2 1 O A HOH 9111 ? ? 1_555 O B HOH 9095 ? ? 4_555 2.05 3 1 O A HOH 9102 ? ? 1_555 O B HOH 9144 ? ? 1_655 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 115 ? ? CG A ASP 115 ? A OD1 A ASP 115 ? A 124.34 118.30 6.04 0.90 N 2 1 OG1 B THR 3 ? ? CB B THR 3 ? ? CG2 B THR 3 ? ? 125.22 110.00 15.22 2.30 N # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CB ? B THR 3 ? PLANAR . 2 1 C1 B A NAG 122 ? 'WRONG HAND' . 3 1 C1 B A NAG 123 ? 'WRONG HAND' . 4 1 C1 B A NAG 124 ? 'WRONG HAND' . 5 1 C1 B B NAG 122 ? 'WRONG HAND' . 6 1 C1 B B NAG 123 ? 'WRONG HAND' . 7 1 C1 B B NAG 124 ? 'WRONG HAND' . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 GLN N N N N 81 GLN CA C N S 82 GLN C C N N 83 GLN O O N N 84 GLN CB C N N 85 GLN CG C N N 86 GLN CD C N N 87 GLN OE1 O N N 88 GLN NE2 N N N 89 GLN OXT O N N 90 GLN H H N N 91 GLN H2 H N N 92 GLN HA H N N 93 GLN HB2 H N N 94 GLN HB3 H N N 95 GLN HG2 H N N 96 GLN HG3 H N N 97 GLN HE21 H N N 98 GLN HE22 H N N 99 GLN HXT H N N 100 GLU N N N N 101 GLU CA C N S 102 GLU C C N N 103 GLU O O N N 104 GLU CB C N N 105 GLU CG C N N 106 GLU CD C N N 107 GLU OE1 O N N 108 GLU OE2 O N N 109 GLU OXT O N N 110 GLU H H N N 111 GLU H2 H N N 112 GLU HA H N N 113 GLU HB2 H N N 114 GLU HB3 H N N 115 GLU HG2 H N N 116 GLU HG3 H N N 117 GLU HE2 H N N 118 GLU HXT H N N 119 GLY N N N N 120 GLY CA C N N 121 GLY C C N N 122 GLY O O N N 123 GLY OXT O N N 124 GLY H H N N 125 GLY H2 H N N 126 GLY HA2 H N N 127 GLY HA3 H N N 128 GLY HXT H N N 129 HIS N N N N 130 HIS CA C N S 131 HIS C C N N 132 HIS O O N N 133 HIS CB C N N 134 HIS CG C Y N 135 HIS ND1 N Y N 136 HIS CD2 C Y N 137 HIS CE1 C Y N 138 HIS NE2 N Y N 139 HIS OXT O N N 140 HIS H H N N 141 HIS H2 H N N 142 HIS HA H N N 143 HIS HB2 H N N 144 HIS HB3 H N N 145 HIS HD1 H N N 146 HIS HD2 H N N 147 HIS HE1 H N N 148 HIS HE2 H N N 149 HIS HXT H N N 150 HOH O O N N 151 HOH H1 H N N 152 HOH H2 H N N 153 ILE N N N N 154 ILE CA C N S 155 ILE C C N N 156 ILE O O N N 157 ILE CB C N S 158 ILE CG1 C N N 159 ILE CG2 C N N 160 ILE CD1 C N N 161 ILE OXT O N N 162 ILE H H N N 163 ILE H2 H N N 164 ILE HA H N N 165 ILE HB H N N 166 ILE HG12 H N N 167 ILE HG13 H N N 168 ILE HG21 H N N 169 ILE HG22 H N N 170 ILE HG23 H N N 171 ILE HD11 H N N 172 ILE HD12 H N N 173 ILE HD13 H N N 174 ILE HXT H N N 175 LEU N N N N 176 LEU CA C N S 177 LEU C C N N 178 LEU O O N N 179 LEU CB C N N 180 LEU CG C N N 181 LEU CD1 C N N 182 LEU CD2 C N N 183 LEU OXT O N N 184 LEU H H N N 185 LEU H2 H N N 186 LEU HA H N N 187 LEU HB2 H N N 188 LEU HB3 H N N 189 LEU HG H N N 190 LEU HD11 H N N 191 LEU HD12 H N N 192 LEU HD13 H N N 193 LEU HD21 H N N 194 LEU HD22 H N N 195 LEU HD23 H N N 196 LEU HXT H N N 197 LYS N N N N 198 LYS CA C N S 199 LYS C C N N 200 LYS O O N N 201 LYS CB C N N 202 LYS CG C N N 203 LYS CD C N N 204 LYS CE C N N 205 LYS NZ N N N 206 LYS OXT O N N 207 LYS H H N N 208 LYS H2 H N N 209 LYS HA H N N 210 LYS HB2 H N N 211 LYS HB3 H N N 212 LYS HG2 H N N 213 LYS HG3 H N N 214 LYS HD2 H N N 215 LYS HD3 H N N 216 LYS HE2 H N N 217 LYS HE3 H N N 218 LYS HZ1 H N N 219 LYS HZ2 H N N 220 LYS HZ3 H N N 221 LYS HXT H N N 222 MET N N N N 223 MET CA C N S 224 MET C C N N 225 MET O O N N 226 MET CB C N N 227 MET CG C N N 228 MET SD S N N 229 MET CE C N N 230 MET OXT O N N 231 MET H H N N 232 MET H2 H N N 233 MET HA H N N 234 MET HB2 H N N 235 MET HB3 H N N 236 MET HG2 H N N 237 MET HG3 H N N 238 MET HE1 H N N 239 MET HE2 H N N 240 MET HE3 H N N 241 MET HXT H N N 242 NAG C1 C N R 243 NAG C2 C N R 244 NAG C3 C N R 245 NAG C4 C N S 246 NAG C5 C N R 247 NAG C6 C N N 248 NAG C7 C N N 249 NAG C8 C N N 250 NAG N2 N N N 251 NAG O1 O N N 252 NAG O3 O N N 253 NAG O4 O N N 254 NAG O5 O N N 255 NAG O6 O N N 256 NAG O7 O N N 257 NAG H1 H N N 258 NAG H2 H N N 259 NAG H3 H N N 260 NAG H4 H N N 261 NAG H5 H N N 262 NAG H61 H N N 263 NAG H62 H N N 264 NAG H81 H N N 265 NAG H82 H N N 266 NAG H83 H N N 267 NAG HN2 H N N 268 NAG HO1 H N N 269 NAG HO3 H N N 270 NAG HO4 H N N 271 NAG HO6 H N N 272 PHE N N N N 273 PHE CA C N S 274 PHE C C N N 275 PHE O O N N 276 PHE CB C N N 277 PHE CG C Y N 278 PHE CD1 C Y N 279 PHE CD2 C Y N 280 PHE CE1 C Y N 281 PHE CE2 C Y N 282 PHE CZ C Y N 283 PHE OXT O N N 284 PHE H H N N 285 PHE H2 H N N 286 PHE HA H N N 287 PHE HB2 H N N 288 PHE HB3 H N N 289 PHE HD1 H N N 290 PHE HD2 H N N 291 PHE HE1 H N N 292 PHE HE2 H N N 293 PHE HZ H N N 294 PHE HXT H N N 295 PRO N N N N 296 PRO CA C N S 297 PRO C C N N 298 PRO O O N N 299 PRO CB C N N 300 PRO CG C N N 301 PRO CD C N N 302 PRO OXT O N N 303 PRO H H N N 304 PRO HA H N N 305 PRO HB2 H N N 306 PRO HB3 H N N 307 PRO HG2 H N N 308 PRO HG3 H N N 309 PRO HD2 H N N 310 PRO HD3 H N N 311 PRO HXT H N N 312 SER N N N N 313 SER CA C N S 314 SER C C N N 315 SER O O N N 316 SER CB C N N 317 SER OG O N N 318 SER OXT O N N 319 SER H H N N 320 SER H2 H N N 321 SER HA H N N 322 SER HB2 H N N 323 SER HB3 H N N 324 SER HG H N N 325 SER HXT H N N 326 SO4 S S N N 327 SO4 O1 O N N 328 SO4 O2 O N N 329 SO4 O3 O N N 330 SO4 O4 O N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HIS N CA sing N N 122 HIS N H sing N N 123 HIS N H2 sing N N 124 HIS CA C sing N N 125 HIS CA CB sing N N 126 HIS CA HA sing N N 127 HIS C O doub N N 128 HIS C OXT sing N N 129 HIS CB CG sing N N 130 HIS CB HB2 sing N N 131 HIS CB HB3 sing N N 132 HIS CG ND1 sing Y N 133 HIS CG CD2 doub Y N 134 HIS ND1 CE1 doub Y N 135 HIS ND1 HD1 sing N N 136 HIS CD2 NE2 sing Y N 137 HIS CD2 HD2 sing N N 138 HIS CE1 NE2 sing Y N 139 HIS CE1 HE1 sing N N 140 HIS NE2 HE2 sing N N 141 HIS OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LEU N CA sing N N 166 LEU N H sing N N 167 LEU N H2 sing N N 168 LEU CA C sing N N 169 LEU CA CB sing N N 170 LEU CA HA sing N N 171 LEU C O doub N N 172 LEU C OXT sing N N 173 LEU CB CG sing N N 174 LEU CB HB2 sing N N 175 LEU CB HB3 sing N N 176 LEU CG CD1 sing N N 177 LEU CG CD2 sing N N 178 LEU CG HG sing N N 179 LEU CD1 HD11 sing N N 180 LEU CD1 HD12 sing N N 181 LEU CD1 HD13 sing N N 182 LEU CD2 HD21 sing N N 183 LEU CD2 HD22 sing N N 184 LEU CD2 HD23 sing N N 185 LEU OXT HXT sing N N 186 LYS N CA sing N N 187 LYS N H sing N N 188 LYS N H2 sing N N 189 LYS CA C sing N N 190 LYS CA CB sing N N 191 LYS CA HA sing N N 192 LYS C O doub N N 193 LYS C OXT sing N N 194 LYS CB CG sing N N 195 LYS CB HB2 sing N N 196 LYS CB HB3 sing N N 197 LYS CG CD sing N N 198 LYS CG HG2 sing N N 199 LYS CG HG3 sing N N 200 LYS CD CE sing N N 201 LYS CD HD2 sing N N 202 LYS CD HD3 sing N N 203 LYS CE NZ sing N N 204 LYS CE HE2 sing N N 205 LYS CE HE3 sing N N 206 LYS NZ HZ1 sing N N 207 LYS NZ HZ2 sing N N 208 LYS NZ HZ3 sing N N 209 LYS OXT HXT sing N N 210 MET N CA sing N N 211 MET N H sing N N 212 MET N H2 sing N N 213 MET CA C sing N N 214 MET CA CB sing N N 215 MET CA HA sing N N 216 MET C O doub N N 217 MET C OXT sing N N 218 MET CB CG sing N N 219 MET CB HB2 sing N N 220 MET CB HB3 sing N N 221 MET CG SD sing N N 222 MET CG HG2 sing N N 223 MET CG HG3 sing N N 224 MET SD CE sing N N 225 MET CE HE1 sing N N 226 MET CE HE2 sing N N 227 MET CE HE3 sing N N 228 MET OXT HXT sing N N 229 NAG C1 C2 sing N N 230 NAG C1 O1 sing N N 231 NAG C1 O5 sing N N 232 NAG C1 H1 sing N N 233 NAG C2 C3 sing N N 234 NAG C2 N2 sing N N 235 NAG C2 H2 sing N N 236 NAG C3 C4 sing N N 237 NAG C3 O3 sing N N 238 NAG C3 H3 sing N N 239 NAG C4 C5 sing N N 240 NAG C4 O4 sing N N 241 NAG C4 H4 sing N N 242 NAG C5 C6 sing N N 243 NAG C5 O5 sing N N 244 NAG C5 H5 sing N N 245 NAG C6 O6 sing N N 246 NAG C6 H61 sing N N 247 NAG C6 H62 sing N N 248 NAG C7 C8 sing N N 249 NAG C7 N2 sing N N 250 NAG C7 O7 doub N N 251 NAG C8 H81 sing N N 252 NAG C8 H82 sing N N 253 NAG C8 H83 sing N N 254 NAG N2 HN2 sing N N 255 NAG O1 HO1 sing N N 256 NAG O3 HO3 sing N N 257 NAG O4 HO4 sing N N 258 NAG O6 HO6 sing N N 259 PHE N CA sing N N 260 PHE N H sing N N 261 PHE N H2 sing N N 262 PHE CA C sing N N 263 PHE CA CB sing N N 264 PHE CA HA sing N N 265 PHE C O doub N N 266 PHE C OXT sing N N 267 PHE CB CG sing N N 268 PHE CB HB2 sing N N 269 PHE CB HB3 sing N N 270 PHE CG CD1 doub Y N 271 PHE CG CD2 sing Y N 272 PHE CD1 CE1 sing Y N 273 PHE CD1 HD1 sing N N 274 PHE CD2 CE2 doub Y N 275 PHE CD2 HD2 sing N N 276 PHE CE1 CZ doub Y N 277 PHE CE1 HE1 sing N N 278 PHE CE2 CZ sing Y N 279 PHE CE2 HE2 sing N N 280 PHE CZ HZ sing N N 281 PHE OXT HXT sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 SO4 S O1 doub N N 313 SO4 S O2 doub N N 314 SO4 S O3 sing N N 315 SO4 S O4 sing N N 316 THR N CA sing N N 317 THR N H sing N N 318 THR N H2 sing N N 319 THR CA C sing N N 320 THR CA CB sing N N 321 THR CA HA sing N N 322 THR C O doub N N 323 THR C OXT sing N N 324 THR CB OG1 sing N N 325 THR CB CG2 sing N N 326 THR CB HB sing N N 327 THR OG1 HG1 sing N N 328 THR CG2 HG21 sing N N 329 THR CG2 HG22 sing N N 330 THR CG2 HG23 sing N N 331 THR OXT HXT sing N N 332 TYR N CA sing N N 333 TYR N H sing N N 334 TYR N H2 sing N N 335 TYR CA C sing N N 336 TYR CA CB sing N N 337 TYR CA HA sing N N 338 TYR C O doub N N 339 TYR C OXT sing N N 340 TYR CB CG sing N N 341 TYR CB HB2 sing N N 342 TYR CB HB3 sing N N 343 TYR CG CD1 doub Y N 344 TYR CG CD2 sing Y N 345 TYR CD1 CE1 sing Y N 346 TYR CD1 HD1 sing N N 347 TYR CD2 CE2 doub Y N 348 TYR CD2 HD2 sing N N 349 TYR CE1 CZ doub Y N 350 TYR CE1 HE1 sing N N 351 TYR CE2 CZ sing Y N 352 TYR CE2 HE2 sing N N 353 TYR CZ OH sing N N 354 TYR OH HH sing N N 355 TYR OXT HXT sing N N 356 VAL N CA sing N N 357 VAL N H sing N N 358 VAL N H2 sing N N 359 VAL CA C sing N N 360 VAL CA CB sing N N 361 VAL CA HA sing N N 362 VAL C O doub N N 363 VAL C OXT sing N N 364 VAL CB CG1 sing N N 365 VAL CB CG2 sing N N 366 VAL CB HB sing N N 367 VAL CG1 HG11 sing N N 368 VAL CG1 HG12 sing N N 369 VAL CG1 HG13 sing N N 370 VAL CG2 HG21 sing N N 371 VAL CG2 HG22 sing N N 372 VAL CG2 HG23 sing N N 373 VAL OXT HXT sing N N 374 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2GUC _pdbx_initial_refinement_model.details ? #