data_2NVJ # _entry.id 2NVJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2NVJ pdb_00002nvj 10.2210/pdb2nvj/pdb RCSB RCSB040353 ? ? WWPDB D_1000040353 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2NVJ _pdbx_database_status.recvd_initial_deposition_date 2006-11-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hemminga, M.A.' 1 'van Mierlo, C.P.' 2 'Wechselberger, R.' 3 'de Jong, E.R.' 4 'Duarte, A.M.' 5 # _citation.id primary _citation.title ;Segment TM7 from the cytoplasmic hemi-channel from V(O)-H(+)-V-ATPase includes a flexible region that has a potential role in proton translocation ; _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1768 _citation.page_first 2263 _citation.page_last 2270 _citation.year 2007 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17573038 _citation.pdbx_database_id_DOI 10.1016/j.bbamem.2007.05.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Duarte, A.M.' 1 ? primary 'de Jong, E.R.' 2 ? primary 'Wechselberger, R.' 3 ? primary 'van Mierlo, C.P.' 4 ? primary 'Hemminga, M.A.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description '25mer peptide from Vacuolar ATP synthase subunit a, vacuolar isoform' _entity.formula_weight 2837.260 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.3.14 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'sMTM7, V-ATPase, V-ATPase a subunit, Vacuolar proton pump a subunit, V-ATPase 95 kDa subunit, Vacuolar pH protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code EFCLNCVSHTASYLRLWALSLAHAQ _entity_poly.pdbx_seq_one_letter_code_can EFCLNCVSHTASYLRLWALSLAHAQ _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 CYS n 1 4 LEU n 1 5 ASN n 1 6 CYS n 1 7 VAL n 1 8 SER n 1 9 HIS n 1 10 THR n 1 11 ALA n 1 12 SER n 1 13 TYR n 1 14 LEU n 1 15 ARG n 1 16 LEU n 1 17 TRP n 1 18 ALA n 1 19 LEU n 1 20 SER n 1 21 LEU n 1 22 ALA n 1 23 HIS n 1 24 ALA n 1 25 GLN n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The peptide was chemically synthesized. This sequence occurs naturally in the yeast.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLN 25 25 25 GLN GLN A . n # _exptl.entry_id 2NVJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 2NVJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2NVJ _struct.title 'NMR structures of transmembrane segment from subunit a from the yeast proton V-ATPase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NVJ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'alfa helix, 3, 10 helix, pi helix, HYDROLASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VPH1_YEAST _struct_ref.pdbx_db_accession P32563 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EFCLNCVSHTASYLRLWALSLAHAQ _struct_ref.pdbx_align_begin 720 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2NVJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32563 _struct_ref_seq.db_align_beg 720 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 744 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 11 ? LEU A 16 ? ALA A 11 LEU A 16 1 ? 6 HELX_P HELX_P2 2 TRP A 17 ? LEU A 19 ? TRP A 17 LEU A 19 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 3 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 6 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 3 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 6 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 4 OE2 A GLU 1 ? ? H A SER 8 ? ? 1.56 2 6 OE2 A GLU 1 ? ? H A SER 8 ? ? 1.57 3 8 OE2 A GLU 1 ? ? HG A SER 8 ? ? 1.58 4 9 HA A ASN 5 ? ? HB2 A HIS 9 ? ? 1.31 5 11 OE1 A GLU 1 ? ? H A SER 8 ? ? 1.58 6 13 HD1 A HIS 23 ? ? O A GLN 25 ? ? 1.59 7 15 OE2 A GLU 1 ? ? H A SER 8 ? ? 1.60 8 16 OE2 A GLU 1 ? ? HG A SER 8 ? ? 1.57 9 16 HD1 A HIS 23 ? ? OXT A GLN 25 ? ? 1.58 10 17 OE2 A GLU 1 ? ? HG A SER 8 ? ? 1.50 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 18 CE1 A TYR 13 ? ? CZ A TYR 13 ? ? 1.469 1.381 0.088 0.013 N 2 18 CZ A TYR 13 ? ? CE2 A TYR 13 ? ? 1.292 1.381 -0.089 0.013 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 4 ? ? 63.21 -5.92 2 1 ASN A 5 ? ? -145.41 -54.75 3 1 ALA A 11 ? ? 65.80 -58.74 4 1 LEU A 19 ? ? -149.59 31.08 5 1 ALA A 22 ? ? -146.04 -35.08 6 2 ASN A 5 ? ? -151.69 -51.58 7 2 THR A 10 ? ? -148.03 -64.15 8 2 ALA A 11 ? ? 70.79 -45.85 9 2 TRP A 17 ? ? -67.58 94.46 10 2 ALA A 18 ? ? -175.97 -58.59 11 3 ASN A 5 ? ? 170.38 -49.52 12 3 ALA A 11 ? ? 62.94 -66.08 13 3 ALA A 22 ? ? -148.43 -38.23 14 4 ASN A 5 ? ? -176.40 -51.00 15 4 ALA A 11 ? ? 67.97 -46.86 16 4 LEU A 16 ? ? -89.57 -70.19 17 4 TRP A 17 ? ? 53.33 85.98 18 4 LEU A 21 ? ? -152.03 -58.15 19 4 ALA A 22 ? ? -141.43 -42.05 20 5 CYS A 3 ? ? -114.32 -85.78 21 5 LEU A 4 ? ? 177.01 25.00 22 5 ASN A 5 ? ? 171.42 -46.61 23 5 ALA A 11 ? ? 66.87 -47.61 24 5 LEU A 21 ? ? 68.01 176.12 25 5 ALA A 22 ? ? -138.11 -40.67 26 6 ASN A 5 ? ? 170.91 -47.36 27 6 ALA A 11 ? ? 59.88 2.39 28 6 LEU A 16 ? ? 74.27 -63.58 29 7 ASN A 5 ? ? 176.39 -55.94 30 7 VAL A 7 ? ? -104.76 -60.48 31 7 ALA A 11 ? ? 69.80 -65.91 32 7 LEU A 16 ? ? -67.30 90.37 33 7 ALA A 18 ? ? 70.10 -78.34 34 7 LEU A 19 ? ? -89.49 47.98 35 8 ASN A 5 ? ? -178.78 -46.10 36 8 THR A 10 ? ? -95.22 -60.79 37 8 ALA A 11 ? ? 65.79 -63.80 38 9 ASN A 5 ? ? 169.10 -44.96 39 9 THR A 10 ? ? -145.84 -42.81 40 9 ALA A 11 ? ? 69.43 -9.99 41 9 TRP A 17 ? ? 72.29 -42.76 42 9 LEU A 21 ? ? 72.46 157.36 43 10 ASN A 5 ? ? 178.60 -67.40 44 10 SER A 8 ? ? -92.71 -63.68 45 10 THR A 10 ? ? -166.05 -47.52 46 10 SER A 12 ? ? -140.66 -54.83 47 10 TRP A 17 ? ? -145.26 -28.86 48 10 LEU A 21 ? ? -94.52 -81.81 49 11 ASN A 5 ? ? 175.58 -51.50 50 12 ASN A 5 ? ? 165.11 -52.15 51 12 ALA A 11 ? ? 64.44 -66.04 52 12 ALA A 18 ? ? -164.16 -67.32 53 12 ALA A 22 ? ? -165.89 -43.44 54 13 ASN A 5 ? ? 177.21 -53.05 55 13 HIS A 9 ? ? -87.73 38.45 56 13 THR A 10 ? ? -139.53 -48.96 57 13 ALA A 11 ? ? 68.67 -53.60 58 13 ALA A 18 ? ? -146.06 -57.94 59 13 LEU A 21 ? ? 57.33 -92.77 60 13 HIS A 23 ? ? -155.02 -27.21 61 13 ALA A 24 ? ? 73.24 -20.66 62 14 ASN A 5 ? ? 170.11 -49.36 63 14 THR A 10 ? ? -130.94 -65.22 64 14 ALA A 11 ? ? 70.04 -45.00 65 14 TYR A 13 ? ? -67.04 87.38 66 14 LEU A 14 ? ? 175.71 -40.07 67 14 ARG A 15 ? ? -160.44 -40.12 68 14 LEU A 21 ? ? -165.95 -76.87 69 14 ALA A 22 ? ? -167.07 25.69 70 15 ASN A 5 ? ? 173.24 -50.22 71 15 ALA A 11 ? ? 66.91 -46.79 72 15 ARG A 15 ? ? -141.58 -71.37 73 15 ALA A 24 ? ? -178.46 77.21 74 16 ASN A 5 ? ? -177.06 -57.22 75 16 SER A 12 ? ? -135.08 -49.07 76 16 LEU A 21 ? ? -101.31 -153.62 77 17 ASN A 5 ? ? -176.16 -57.47 78 17 THR A 10 ? ? -143.04 -55.13 79 17 ALA A 11 ? ? 67.63 -57.76 80 18 PHE A 2 ? ? -80.44 -71.58 81 18 LEU A 4 ? ? 70.50 -3.79 82 18 ASN A 5 ? ? -146.39 -52.42 83 18 ALA A 22 ? ? -162.75 38.68 84 19 LEU A 4 ? ? 67.09 -6.69 85 19 ASN A 5 ? ? -138.17 -55.33 86 19 SER A 8 ? ? -60.75 -76.82 87 19 HIS A 9 ? ? -88.03 35.34 88 19 THR A 10 ? ? -143.05 -65.64 89 20 ASN A 5 ? ? 171.69 -47.41 90 20 ALA A 11 ? ? 68.03 -46.90 91 20 TRP A 17 ? ? -137.79 -61.01 92 20 LEU A 21 ? ? 66.86 -174.46 93 20 ALA A 22 ? ? -145.08 -55.93 # _pdbx_nmr_ensemble.entry_id 2NVJ _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2NVJ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2mM sMTM7 peptide (natural abundance labeling); 100% d6-DMSO' _pdbx_nmr_sample_details.solvent_system '100% d6-DMSO' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR ? ? 1 refinement CNS 1.1 ? 2 'structure solution' 'Aria 1.2' ? ? 3 'data analysis' Sparky ? ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 GLN N N N N 72 GLN CA C N S 73 GLN C C N N 74 GLN O O N N 75 GLN CB C N N 76 GLN CG C N N 77 GLN CD C N N 78 GLN OE1 O N N 79 GLN NE2 N N N 80 GLN OXT O N N 81 GLN H H N N 82 GLN H2 H N N 83 GLN HA H N N 84 GLN HB2 H N N 85 GLN HB3 H N N 86 GLN HG2 H N N 87 GLN HG3 H N N 88 GLN HE21 H N N 89 GLN HE22 H N N 90 GLN HXT H N N 91 GLU N N N N 92 GLU CA C N S 93 GLU C C N N 94 GLU O O N N 95 GLU CB C N N 96 GLU CG C N N 97 GLU CD C N N 98 GLU OE1 O N N 99 GLU OE2 O N N 100 GLU OXT O N N 101 GLU H H N N 102 GLU H2 H N N 103 GLU HA H N N 104 GLU HB2 H N N 105 GLU HB3 H N N 106 GLU HG2 H N N 107 GLU HG3 H N N 108 GLU HE2 H N N 109 GLU HXT H N N 110 HIS N N N N 111 HIS CA C N S 112 HIS C C N N 113 HIS O O N N 114 HIS CB C N N 115 HIS CG C Y N 116 HIS ND1 N Y N 117 HIS CD2 C Y N 118 HIS CE1 C Y N 119 HIS NE2 N Y N 120 HIS OXT O N N 121 HIS H H N N 122 HIS H2 H N N 123 HIS HA H N N 124 HIS HB2 H N N 125 HIS HB3 H N N 126 HIS HD1 H N N 127 HIS HD2 H N N 128 HIS HE1 H N N 129 HIS HE2 H N N 130 HIS HXT H N N 131 LEU N N N N 132 LEU CA C N S 133 LEU C C N N 134 LEU O O N N 135 LEU CB C N N 136 LEU CG C N N 137 LEU CD1 C N N 138 LEU CD2 C N N 139 LEU OXT O N N 140 LEU H H N N 141 LEU H2 H N N 142 LEU HA H N N 143 LEU HB2 H N N 144 LEU HB3 H N N 145 LEU HG H N N 146 LEU HD11 H N N 147 LEU HD12 H N N 148 LEU HD13 H N N 149 LEU HD21 H N N 150 LEU HD22 H N N 151 LEU HD23 H N N 152 LEU HXT H N N 153 PHE N N N N 154 PHE CA C N S 155 PHE C C N N 156 PHE O O N N 157 PHE CB C N N 158 PHE CG C Y N 159 PHE CD1 C Y N 160 PHE CD2 C Y N 161 PHE CE1 C Y N 162 PHE CE2 C Y N 163 PHE CZ C Y N 164 PHE OXT O N N 165 PHE H H N N 166 PHE H2 H N N 167 PHE HA H N N 168 PHE HB2 H N N 169 PHE HB3 H N N 170 PHE HD1 H N N 171 PHE HD2 H N N 172 PHE HE1 H N N 173 PHE HE2 H N N 174 PHE HZ H N N 175 PHE HXT H N N 176 SER N N N N 177 SER CA C N S 178 SER C C N N 179 SER O O N N 180 SER CB C N N 181 SER OG O N N 182 SER OXT O N N 183 SER H H N N 184 SER H2 H N N 185 SER HA H N N 186 SER HB2 H N N 187 SER HB3 H N N 188 SER HG H N N 189 SER HXT H N N 190 THR N N N N 191 THR CA C N S 192 THR C C N N 193 THR O O N N 194 THR CB C N R 195 THR OG1 O N N 196 THR CG2 C N N 197 THR OXT O N N 198 THR H H N N 199 THR H2 H N N 200 THR HA H N N 201 THR HB H N N 202 THR HG1 H N N 203 THR HG21 H N N 204 THR HG22 H N N 205 THR HG23 H N N 206 THR HXT H N N 207 TRP N N N N 208 TRP CA C N S 209 TRP C C N N 210 TRP O O N N 211 TRP CB C N N 212 TRP CG C Y N 213 TRP CD1 C Y N 214 TRP CD2 C Y N 215 TRP NE1 N Y N 216 TRP CE2 C Y N 217 TRP CE3 C Y N 218 TRP CZ2 C Y N 219 TRP CZ3 C Y N 220 TRP CH2 C Y N 221 TRP OXT O N N 222 TRP H H N N 223 TRP H2 H N N 224 TRP HA H N N 225 TRP HB2 H N N 226 TRP HB3 H N N 227 TRP HD1 H N N 228 TRP HE1 H N N 229 TRP HE3 H N N 230 TRP HZ2 H N N 231 TRP HZ3 H N N 232 TRP HH2 H N N 233 TRP HXT H N N 234 TYR N N N N 235 TYR CA C N S 236 TYR C C N N 237 TYR O O N N 238 TYR CB C N N 239 TYR CG C Y N 240 TYR CD1 C Y N 241 TYR CD2 C Y N 242 TYR CE1 C Y N 243 TYR CE2 C Y N 244 TYR CZ C Y N 245 TYR OH O N N 246 TYR OXT O N N 247 TYR H H N N 248 TYR H2 H N N 249 TYR HA H N N 250 TYR HB2 H N N 251 TYR HB3 H N N 252 TYR HD1 H N N 253 TYR HD2 H N N 254 TYR HE1 H N N 255 TYR HE2 H N N 256 TYR HH H N N 257 TYR HXT H N N 258 VAL N N N N 259 VAL CA C N S 260 VAL C C N N 261 VAL O O N N 262 VAL CB C N N 263 VAL CG1 C N N 264 VAL CG2 C N N 265 VAL OXT O N N 266 VAL H H N N 267 VAL H2 H N N 268 VAL HA H N N 269 VAL HB H N N 270 VAL HG11 H N N 271 VAL HG12 H N N 272 VAL HG13 H N N 273 VAL HG21 H N N 274 VAL HG22 H N N 275 VAL HG23 H N N 276 VAL HXT H N N 277 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 GLN N CA sing N N 68 GLN N H sing N N 69 GLN N H2 sing N N 70 GLN CA C sing N N 71 GLN CA CB sing N N 72 GLN CA HA sing N N 73 GLN C O doub N N 74 GLN C OXT sing N N 75 GLN CB CG sing N N 76 GLN CB HB2 sing N N 77 GLN CB HB3 sing N N 78 GLN CG CD sing N N 79 GLN CG HG2 sing N N 80 GLN CG HG3 sing N N 81 GLN CD OE1 doub N N 82 GLN CD NE2 sing N N 83 GLN NE2 HE21 sing N N 84 GLN NE2 HE22 sing N N 85 GLN OXT HXT sing N N 86 GLU N CA sing N N 87 GLU N H sing N N 88 GLU N H2 sing N N 89 GLU CA C sing N N 90 GLU CA CB sing N N 91 GLU CA HA sing N N 92 GLU C O doub N N 93 GLU C OXT sing N N 94 GLU CB CG sing N N 95 GLU CB HB2 sing N N 96 GLU CB HB3 sing N N 97 GLU CG CD sing N N 98 GLU CG HG2 sing N N 99 GLU CG HG3 sing N N 100 GLU CD OE1 doub N N 101 GLU CD OE2 sing N N 102 GLU OE2 HE2 sing N N 103 GLU OXT HXT sing N N 104 HIS N CA sing N N 105 HIS N H sing N N 106 HIS N H2 sing N N 107 HIS CA C sing N N 108 HIS CA CB sing N N 109 HIS CA HA sing N N 110 HIS C O doub N N 111 HIS C OXT sing N N 112 HIS CB CG sing N N 113 HIS CB HB2 sing N N 114 HIS CB HB3 sing N N 115 HIS CG ND1 sing Y N 116 HIS CG CD2 doub Y N 117 HIS ND1 CE1 doub Y N 118 HIS ND1 HD1 sing N N 119 HIS CD2 NE2 sing Y N 120 HIS CD2 HD2 sing N N 121 HIS CE1 NE2 sing Y N 122 HIS CE1 HE1 sing N N 123 HIS NE2 HE2 sing N N 124 HIS OXT HXT sing N N 125 LEU N CA sing N N 126 LEU N H sing N N 127 LEU N H2 sing N N 128 LEU CA C sing N N 129 LEU CA CB sing N N 130 LEU CA HA sing N N 131 LEU C O doub N N 132 LEU C OXT sing N N 133 LEU CB CG sing N N 134 LEU CB HB2 sing N N 135 LEU CB HB3 sing N N 136 LEU CG CD1 sing N N 137 LEU CG CD2 sing N N 138 LEU CG HG sing N N 139 LEU CD1 HD11 sing N N 140 LEU CD1 HD12 sing N N 141 LEU CD1 HD13 sing N N 142 LEU CD2 HD21 sing N N 143 LEU CD2 HD22 sing N N 144 LEU CD2 HD23 sing N N 145 LEU OXT HXT sing N N 146 PHE N CA sing N N 147 PHE N H sing N N 148 PHE N H2 sing N N 149 PHE CA C sing N N 150 PHE CA CB sing N N 151 PHE CA HA sing N N 152 PHE C O doub N N 153 PHE C OXT sing N N 154 PHE CB CG sing N N 155 PHE CB HB2 sing N N 156 PHE CB HB3 sing N N 157 PHE CG CD1 doub Y N 158 PHE CG CD2 sing Y N 159 PHE CD1 CE1 sing Y N 160 PHE CD1 HD1 sing N N 161 PHE CD2 CE2 doub Y N 162 PHE CD2 HD2 sing N N 163 PHE CE1 CZ doub Y N 164 PHE CE1 HE1 sing N N 165 PHE CE2 CZ sing Y N 166 PHE CE2 HE2 sing N N 167 PHE CZ HZ sing N N 168 PHE OXT HXT sing N N 169 SER N CA sing N N 170 SER N H sing N N 171 SER N H2 sing N N 172 SER CA C sing N N 173 SER CA CB sing N N 174 SER CA HA sing N N 175 SER C O doub N N 176 SER C OXT sing N N 177 SER CB OG sing N N 178 SER CB HB2 sing N N 179 SER CB HB3 sing N N 180 SER OG HG sing N N 181 SER OXT HXT sing N N 182 THR N CA sing N N 183 THR N H sing N N 184 THR N H2 sing N N 185 THR CA C sing N N 186 THR CA CB sing N N 187 THR CA HA sing N N 188 THR C O doub N N 189 THR C OXT sing N N 190 THR CB OG1 sing N N 191 THR CB CG2 sing N N 192 THR CB HB sing N N 193 THR OG1 HG1 sing N N 194 THR CG2 HG21 sing N N 195 THR CG2 HG22 sing N N 196 THR CG2 HG23 sing N N 197 THR OXT HXT sing N N 198 TRP N CA sing N N 199 TRP N H sing N N 200 TRP N H2 sing N N 201 TRP CA C sing N N 202 TRP CA CB sing N N 203 TRP CA HA sing N N 204 TRP C O doub N N 205 TRP C OXT sing N N 206 TRP CB CG sing N N 207 TRP CB HB2 sing N N 208 TRP CB HB3 sing N N 209 TRP CG CD1 doub Y N 210 TRP CG CD2 sing Y N 211 TRP CD1 NE1 sing Y N 212 TRP CD1 HD1 sing N N 213 TRP CD2 CE2 doub Y N 214 TRP CD2 CE3 sing Y N 215 TRP NE1 CE2 sing Y N 216 TRP NE1 HE1 sing N N 217 TRP CE2 CZ2 sing Y N 218 TRP CE3 CZ3 doub Y N 219 TRP CE3 HE3 sing N N 220 TRP CZ2 CH2 doub Y N 221 TRP CZ2 HZ2 sing N N 222 TRP CZ3 CH2 sing Y N 223 TRP CZ3 HZ3 sing N N 224 TRP CH2 HH2 sing N N 225 TRP OXT HXT sing N N 226 TYR N CA sing N N 227 TYR N H sing N N 228 TYR N H2 sing N N 229 TYR CA C sing N N 230 TYR CA CB sing N N 231 TYR CA HA sing N N 232 TYR C O doub N N 233 TYR C OXT sing N N 234 TYR CB CG sing N N 235 TYR CB HB2 sing N N 236 TYR CB HB3 sing N N 237 TYR CG CD1 doub Y N 238 TYR CG CD2 sing Y N 239 TYR CD1 CE1 sing Y N 240 TYR CD1 HD1 sing N N 241 TYR CD2 CE2 doub Y N 242 TYR CD2 HD2 sing N N 243 TYR CE1 CZ doub Y N 244 TYR CE1 HE1 sing N N 245 TYR CE2 CZ sing Y N 246 TYR CE2 HE2 sing N N 247 TYR CZ OH sing N N 248 TYR OH HH sing N N 249 TYR OXT HXT sing N N 250 VAL N CA sing N N 251 VAL N H sing N N 252 VAL N H2 sing N N 253 VAL CA C sing N N 254 VAL CA CB sing N N 255 VAL CA HA sing N N 256 VAL C O doub N N 257 VAL C OXT sing N N 258 VAL CB CG1 sing N N 259 VAL CB CG2 sing N N 260 VAL CB HB sing N N 261 VAL CG1 HG11 sing N N 262 VAL CG1 HG12 sing N N 263 VAL CG1 HG13 sing N N 264 VAL CG2 HG21 sing N N 265 VAL CG2 HG22 sing N N 266 VAL CG2 HG23 sing N N 267 VAL OXT HXT sing N N 268 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 2NVJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_