HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-NOV-06 2NWT TITLE NMR STRUCTURE OF PROTEIN UPF0165 PROTEIN AF_2212 FROM ARCHAEOGLOBUS TITLE 2 FULGIDUS; NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET GR83 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0165 PROTEIN AF_2212; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: XL-10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS HOMO DIMER PROTEIN, GFT NMR, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.K.SINGARAPU,D.K.SUKUMARAN,D.PARISH,H.S.ATREYA,G.LIU,A.ELETSKY, AUTHOR 2 C.X.CHEN,M.JIANG,K.CUNNINGHAM,R.XIAO,G.V.T.SWAPNA,T.B.ACTON,B.ROST, AUTHOR 3 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (NESG) REVDAT 4 27-DEC-23 2NWT 1 REMARK REVDAT 3 16-MAR-22 2NWT 1 REMARK SEQADV REVDAT 2 24-FEB-09 2NWT 1 VERSN REVDAT 1 30-JAN-07 2NWT 0 JRNL AUTH K.K.SINGARAPU,D.K.SUKUMARAN,D.PARISH,H.S.ATREYA,G.LIU, JRNL AUTH 2 A.ELETSKY,C.X.CHEN,M.JIANG,K.CUNNINGHAM,L.C.MA,R.XIAO,J.LIU, JRNL AUTH 3 M.BARAN,G.V.T.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE, JRNL AUTH 4 T.SZYPERSKI JRNL TITL NMR STRUCTURE OF PROTEIN Y2212_ARCFU FROM ARCHAEOGLOBUS JRNL TITL 2 FULGIDUS; NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JRNL TITL 3 GR83 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CYANA 2.1, CNS 1.1 REMARK 3 AUTHORS : DELAGLIO ET AL (NMRPIPE), GUNTERT ET AL (CYANA), REMARK 3 BRUNGET ET AL (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NWT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040399. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM PROTEIN Y2212_ARCFU, U REMARK 210 -15N,13C, 5MM CACL, 100MM NACL, REMARK 210 20MM NH4OAC, 10MM DTT, 0.02%NAN3, REMARK 210 5% D2O, 95% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 4,3D, GFT HNNCABCA; 4,3D, GFT REMARK 210 CABCACONNH; 4,3D, GFT HCCH COSY; REMARK 210 3D, 15N-13C RESOLVED REMARK 210 SIMULTANIOUS NOESY; 3D, 15N, 13C REMARK 210 RESOLVED X-FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.5 REMARK 210 METHOD USED : SIMULATED ANNEALING MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 20 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING RECENTLY DEVELOPED REMARK 210 HIGH THROUGHPUT NMR STRUCTURE DETERMINATION PROTOCOL. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB2 PHE A 14 HB2 PHE B 14 1.13 REMARK 500 HA2 GLY A 25 HB VAL B 8 1.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 22 -158.65 -127.11 REMARK 500 1 PRO A 44 -174.87 -69.15 REMARK 500 1 LYS A 52 104.73 61.16 REMARK 500 1 LEU A 62 -171.67 62.18 REMARK 500 1 HIS A 65 -159.02 58.09 REMARK 500 1 PRO B 2 88.17 -69.62 REMARK 500 1 PRO B 16 168.96 -44.93 REMARK 500 1 GLN B 18 148.38 85.53 REMARK 500 1 VAL B 36 161.65 61.53 REMARK 500 1 PRO B 38 -166.48 -75.25 REMARK 500 1 LEU B 62 84.85 45.99 REMARK 500 1 HIS B 64 31.65 -142.87 REMARK 500 2 ASN A 11 45.13 -67.21 REMARK 500 2 LEU A 34 -161.57 56.42 REMARK 500 2 ASP A 40 -158.88 56.24 REMARK 500 2 GLU A 48 -36.77 -144.73 REMARK 500 2 MET A 59 161.92 75.16 REMARK 500 2 LEU A 62 137.06 69.57 REMARK 500 2 LYS B 23 157.77 77.17 REMARK 500 2 ILE B 53 86.34 57.25 REMARK 500 2 ARG B 54 94.49 70.68 REMARK 500 2 SER B 60 128.62 75.73 REMARK 500 2 LEU B 62 83.72 53.35 REMARK 500 2 HIS B 64 35.04 -85.72 REMARK 500 3 PRO A 38 -154.12 -90.71 REMARK 500 3 HIS A 67 -55.87 -124.47 REMARK 500 3 HIS A 68 -24.07 -142.62 REMARK 500 3 ASN B 11 61.28 -66.86 REMARK 500 3 ILE B 53 102.42 54.85 REMARK 500 3 THR B 57 145.49 72.09 REMARK 500 3 LEU B 62 179.11 61.48 REMARK 500 3 HIS B 67 -103.96 -87.13 REMARK 500 3 HIS B 68 146.84 156.65 REMARK 500 4 PRO A 2 44.83 -74.22 REMARK 500 4 PRO A 38 -166.85 -79.88 REMARK 500 4 ILE A 53 100.77 73.65 REMARK 500 4 HIS A 68 -91.43 -174.96 REMARK 500 4 LYS B 19 167.71 55.65 REMARK 500 4 LYS B 23 -163.07 33.95 REMARK 500 4 LEU B 62 103.64 54.86 REMARK 500 4 HIS B 66 77.19 -160.27 REMARK 500 5 LEU A 17 -66.43 -93.06 REMARK 500 5 THR A 57 145.25 69.89 REMARK 500 5 LEU A 62 82.64 50.45 REMARK 500 5 HIS A 64 69.34 62.14 REMARK 500 5 HIS A 65 36.44 -88.20 REMARK 500 5 LYS B 19 123.17 34.27 REMARK 500 5 LEU B 22 -161.97 -110.81 REMARK 500 5 LEU B 34 -150.39 -98.08 REMARK 500 5 PRO B 44 -162.58 -67.18 REMARK 500 REMARK 500 THIS ENTRY HAS 189 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 10 ASN A 11 5 -149.48 REMARK 500 ASN A 11 GLY A 12 5 149.19 REMARK 500 GLN B 18 LYS B 19 8 -143.29 REMARK 500 GLN A 18 LYS A 19 18 -141.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GR83 RELATED DB: TARGETDB DBREF 2NWT A 1 61 UNP O28071 Y2212_ARCFU 1 61 DBREF 2NWT B 1 61 UNP O28071 Y2212_ARCFU 1 61 SEQADV 2NWT LEU A 62 UNP O28071 CLONING ARTIFACT SEQADV 2NWT GLU A 63 UNP O28071 CLONING ARTIFACT SEQADV 2NWT HIS A 64 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 65 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 66 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 67 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 68 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS A 69 UNP O28071 EXPRESSION TAG SEQADV 2NWT LEU B 62 UNP O28071 CLONING ARTIFACT SEQADV 2NWT GLU B 63 UNP O28071 CLONING ARTIFACT SEQADV 2NWT HIS B 64 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 65 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 66 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 67 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 68 UNP O28071 EXPRESSION TAG SEQADV 2NWT HIS B 69 UNP O28071 EXPRESSION TAG SEQRES 1 A 69 MET PRO LYS ILE ILE GLU ALA VAL TYR GLU ASN GLY VAL SEQRES 2 A 69 PHE LYS PRO LEU GLN LYS VAL ASP LEU LYS GLU GLY GLU SEQRES 3 A 69 ARG VAL LYS ILE LYS LEU GLU LEU LYS VAL GLU PRO ILE SEQRES 4 A 69 ASP LEU GLY GLU PRO VAL SER VAL GLU GLU ILE LYS LYS SEQRES 5 A 69 ILE ARG ASP GLY THR TRP MET SER SER LEU GLU HIS HIS SEQRES 6 A 69 HIS HIS HIS HIS SEQRES 1 B 69 MET PRO LYS ILE ILE GLU ALA VAL TYR GLU ASN GLY VAL SEQRES 2 B 69 PHE LYS PRO LEU GLN LYS VAL ASP LEU LYS GLU GLY GLU SEQRES 3 B 69 ARG VAL LYS ILE LYS LEU GLU LEU LYS VAL GLU PRO ILE SEQRES 4 B 69 ASP LEU GLY GLU PRO VAL SER VAL GLU GLU ILE LYS LYS SEQRES 5 B 69 ILE ARG ASP GLY THR TRP MET SER SER LEU GLU HIS HIS SEQRES 6 B 69 HIS HIS HIS HIS HELIX 1 1 GLU A 48 LYS A 52 5 5 SHEET 1 A 7 ILE A 5 GLU A 10 0 SHEET 2 A 7 VAL A 13 PRO A 16 -1 O LYS A 15 N VAL A 8 SHEET 3 A 7 VAL B 13 LEU B 17 -1 O PHE B 14 N PHE A 14 SHEET 4 A 7 GLU B 6 GLU B 10 -1 N VAL B 8 O LYS B 15 SHEET 5 A 7 VAL A 28 LYS A 31 -1 N VAL A 28 O ALA B 7 SHEET 6 A 7 GLU B 26 LEU B 32 -1 O LYS B 29 N LYS A 31 SHEET 7 A 7 ILE A 5 GLU A 10 -1 N ILE A 5 O ILE B 30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1