HEADER MEMBRANE PROTEIN 27-NOV-06 2O00 TITLE NMR STRUCTURE ANALYSIS OF THE PENETRATIN CONJUGATED GAS (374-394) TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PENETRATIN CONJUGATED GAS (374-394) PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: CONTINUOUS FLOW SOLID PHASE METHOD USING FMOC SOURCE 4 CHEMISTRY KEYWDS CONFORMATIONAL ANALYSIS, G PROTEIN, GAS SUBUNIT, A2A ADENOSINE KEYWDS 2 RECEPTOR, CELL-PENETRATING PEPTIDES, PENETRATIN, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 24 AUTHOR A.M.D'URSI,P.ROVERO,S.ALBRIZIO,C.ESPSITO,G.D'ERRICO,E.NOVELLINO REVDAT 4 27-DEC-23 2O00 1 REMARK REVDAT 3 16-MAR-22 2O00 1 REMARK REVDAT 2 24-FEB-09 2O00 1 VERSN REVDAT 1 05-JUN-07 2O00 0 JRNL AUTH S.ALBRIZIO,L.GIUSTI,G.D'ERRICO,C.ESPOSITO,F.PORCHIA, JRNL AUTH 2 G.CALIENDO,E.NOVELLINO,M.R.MAZZONI,P.ROVERO,A.M.D'URSI JRNL TITL DRIVING FORCES IN THE DELIVERY OF PENETRATIN CONJUGATED G JRNL TITL 2 PROTEIN FRAGMENT. JRNL REF J.MED.CHEM. V. 50 1458 2007 JRNL REFN ISSN 0022-2623 JRNL PMID 17348636 JRNL DOI 10.1021/JM060935B REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2O00 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000040514. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1MM PEPTIDE, 100MM SODIUM REMARK 210 DODECYL SULPHATE, 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 1.3, SPARKY 1.3 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 24 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 24 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 2 52.80 37.96 REMARK 500 1 ILE A 5 45.63 -97.26 REMARK 500 1 PHE A 7 40.29 -87.38 REMARK 500 1 GLN A 8 40.34 171.26 REMARK 500 1 LYS A 13 72.46 173.03 REMARK 500 1 LYS A 15 103.87 54.18 REMARK 500 1 LYS A 16 -31.02 166.93 REMARK 500 1 ARG A 23 57.05 -94.86 REMARK 500 1 ASP A 24 -72.37 -143.08 REMARK 500 1 ILE A 25 -61.23 -161.84 REMARK 500 1 ARG A 28 57.03 72.72 REMARK 500 1 MET A 29 -43.41 -144.95 REMARK 500 1 LEU A 31 -157.45 -58.59 REMARK 500 1 ARG A 32 -44.11 -174.86 REMARK 500 1 GLN A 33 73.59 42.41 REMARK 500 1 TYR A 34 39.02 -87.70 REMARK 500 1 GLU A 35 -160.23 -57.29 REMARK 500 2 ILE A 5 -77.23 -85.02 REMARK 500 2 TRP A 6 -60.95 71.93 REMARK 500 2 PHE A 7 33.59 -85.08 REMARK 500 2 GLN A 8 36.76 177.27 REMARK 500 2 ARG A 10 -37.27 -172.05 REMARK 500 2 ARG A 11 -33.84 78.25 REMARK 500 2 TRP A 14 50.31 -91.75 REMARK 500 2 LYS A 16 -29.05 163.27 REMARK 500 2 ARG A 23 55.34 -90.58 REMARK 500 2 ASP A 24 -78.26 -144.14 REMARK 500 2 ILE A 25 -61.57 -151.76 REMARK 500 2 GLN A 27 10.27 59.47 REMARK 500 2 LEU A 31 -166.31 -56.26 REMARK 500 2 TYR A 34 36.07 -88.65 REMARK 500 2 GLU A 35 -160.29 -57.27 REMARK 500 2 LEU A 36 -33.77 -36.75 REMARK 500 3 TRP A 6 -47.85 -132.48 REMARK 500 3 ASN A 9 32.28 -95.99 REMARK 500 3 LYS A 13 70.63 175.03 REMARK 500 3 LYS A 15 40.79 173.60 REMARK 500 3 ARG A 17 -41.99 -166.69 REMARK 500 3 ARG A 23 57.40 -93.69 REMARK 500 3 ASP A 24 -73.90 -143.59 REMARK 500 3 ILE A 25 -59.45 -157.35 REMARK 500 3 GLN A 27 -10.48 68.48 REMARK 500 3 ARG A 28 7.68 -151.91 REMARK 500 3 MET A 29 47.66 36.14 REMARK 500 3 LEU A 31 -164.15 -73.62 REMARK 500 3 ARG A 32 32.97 -94.87 REMARK 500 3 GLN A 33 38.84 -99.47 REMARK 500 3 TYR A 34 41.38 -86.63 REMARK 500 3 GLU A 35 -160.48 -57.16 REMARK 500 4 GLN A 2 64.59 65.43 REMARK 500 REMARK 500 THIS ENTRY HAS 405 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NZZ RELATED DB: PDB REMARK 900 SAME PEPTIDE IN SODIUM DODECYL SULPHATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IS NOT AVAILABLE IN THE UNIPROT DATABASE AT REMARK 999 THE TIME OF PROCESSING. DBREF 2O00 A 1 37 PDB 2O00 2O00 1 37 SEQRES 1 A 37 ARG GLN ILE LYS ILE TRP PHE GLN ASN ARG ARG MET LYS SEQRES 2 A 37 TRP LYS LYS ARG VAL PHE ASN ASP ALA ARG ASP ILE ILE SEQRES 3 A 37 GLN ARG MET HIS LEU ARG GLN TYR GLU LEU LEU HELIX 1 1 ILE A 5 ASN A 9 5 5 HELIX 2 2 ARG A 17 ALA A 22 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1