HEADER TRANSFERASE 27-NOV-06 2O0L TITLE HUMAN SPERMIDINE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPERMIDINE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PUTRESCINE AMINOPROPYLTRANSFERASE, SPDSY; COMPND 5 EC: 2.5.1.16; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SRM, SPS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SPERMIDINE SYNTHASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.MIN,H.WU,H.ZENG,P.LOPPNAU,J.WEIGELT,M.SUNDSTROM,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,A.BOCHKAREV,A.N.PLOTNIKOV,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 5 27-DEC-23 2O0L 1 REMARK SEQADV REVDAT 4 13-JUL-11 2O0L 1 VERSN REVDAT 3 24-FEB-09 2O0L 1 VERSN REVDAT 2 18-SEP-07 2O0L 1 JRNL REVDAT 1 12-DEC-06 2O0L 0 JRNL AUTH H.WU,J.MIN,Y.IKEGUCHI,H.ZENG,A.DONG,P.LOPPNAU,A.E.PEGG, JRNL AUTH 2 A.N.PLOTNIKOV JRNL TITL STRUCTURE AND MECHANISM OF SPERMIDINE SYNTHASES. JRNL REF BIOCHEMISTRY V. 46 8331 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17585781 JRNL DOI 10.1021/BI602498K REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 36969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1945 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2445 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4443 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 265 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.25000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : -1.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.33000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.216 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.195 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.898 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4596 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6225 ; 1.521 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 556 ; 6.787 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 217 ;36.311 ;24.608 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 787 ;14.717 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;19.166 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 681 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3483 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2172 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3050 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 324 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.182 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.211 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2904 ; 0.718 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4511 ; 1.079 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1977 ; 2.041 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1714 ; 2.922 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 30 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3168 21.7112 67.3151 REMARK 3 T TENSOR REMARK 3 T11: 0.0078 T22: 0.1084 REMARK 3 T33: 0.0972 T12: 0.0130 REMARK 3 T13: 0.0153 T23: -0.0281 REMARK 3 L TENSOR REMARK 3 L11: 0.8158 L22: 2.1675 REMARK 3 L33: 6.0630 L12: 0.7268 REMARK 3 L13: -0.7987 L23: -1.8995 REMARK 3 S TENSOR REMARK 3 S11: 0.0316 S12: -0.0523 S13: 0.1380 REMARK 3 S21: 0.1496 S22: 0.1361 S23: 0.2750 REMARK 3 S31: -0.0170 S32: -0.4070 S33: -0.1677 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 54 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5420 28.4169 81.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0948 REMARK 3 T33: 0.0429 T12: -0.0266 REMARK 3 T13: 0.0696 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.0368 L22: 6.1781 REMARK 3 L33: 1.2351 L12: 0.2886 REMARK 3 L13: -1.7095 L23: -1.4576 REMARK 3 S TENSOR REMARK 3 S11: 0.1772 S12: -0.1315 S13: 0.3747 REMARK 3 S21: 0.4630 S22: 0.0781 S23: 0.4471 REMARK 3 S31: -0.2571 S32: 0.0430 S33: -0.2553 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1096 21.4648 75.2062 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.0935 REMARK 3 T33: 0.0338 T12: -0.0050 REMARK 3 T13: 0.0331 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 2.1143 L22: 0.1187 REMARK 3 L33: 1.3448 L12: -0.5005 REMARK 3 L13: 0.4086 L23: -0.0790 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.0536 S13: 0.1127 REMARK 3 S21: 0.0100 S22: 0.0290 S23: 0.0340 REMARK 3 S31: 0.0542 S32: -0.1670 S33: -0.0140 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 38.8991 24.7276 69.3560 REMARK 3 T TENSOR REMARK 3 T11: 0.0752 T22: 0.0812 REMARK 3 T33: 0.0494 T12: 0.0091 REMARK 3 T13: -0.0025 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.6703 L22: 2.5365 REMARK 3 L33: 1.3012 L12: 1.8389 REMARK 3 L13: -1.4604 L23: -1.3155 REMARK 3 S TENSOR REMARK 3 S11: 0.1228 S12: -0.0406 S13: 0.0422 REMARK 3 S21: 0.2289 S22: -0.0710 S23: -0.0187 REMARK 3 S31: -0.1087 S32: 0.0652 S33: -0.0518 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 42.4313 31.6555 76.2371 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.0808 REMARK 3 T33: 0.0336 T12: -0.0168 REMARK 3 T13: -0.0241 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.8921 L22: 2.6670 REMARK 3 L33: 1.8813 L12: -0.3482 REMARK 3 L13: -0.8599 L23: -0.4551 REMARK 3 S TENSOR REMARK 3 S11: 0.1645 S12: -0.1403 S13: 0.0162 REMARK 3 S21: 0.2720 S22: -0.1481 S23: -0.2196 REMARK 3 S31: -0.1222 S32: 0.1465 S33: -0.0164 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7771 30.2195 83.2871 REMARK 3 T TENSOR REMARK 3 T11: 0.1527 T22: 0.0901 REMARK 3 T33: -0.0170 T12: -0.0590 REMARK 3 T13: 0.0220 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 2.3225 L22: 2.2283 REMARK 3 L33: 0.8705 L12: 1.0103 REMARK 3 L13: -0.5059 L23: -1.3862 REMARK 3 S TENSOR REMARK 3 S11: 0.2829 S12: -0.3169 S13: 0.0927 REMARK 3 S21: 0.3417 S22: -0.2218 S23: -0.0338 REMARK 3 S31: -0.1368 S32: -0.0206 S33: -0.0611 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 147 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): 37.6358 41.6742 74.3586 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.0466 REMARK 3 T33: 0.0414 T12: -0.0179 REMARK 3 T13: 0.0383 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 2.1772 L22: 2.1458 REMARK 3 L33: 0.9434 L12: -0.2859 REMARK 3 L13: 0.4063 L23: 0.5922 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: -0.0868 S13: 0.1071 REMARK 3 S21: 0.1537 S22: -0.0675 S23: 0.1036 REMARK 3 S31: -0.0970 S32: -0.0936 S33: -0.0627 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 187 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 40.6600 43.8041 64.4324 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0437 REMARK 3 T33: 0.0646 T12: -0.0157 REMARK 3 T13: 0.0326 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 7.2186 L22: 5.3063 REMARK 3 L33: 4.2792 L12: -2.2361 REMARK 3 L13: -0.5932 L23: 0.5379 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: 0.1530 S13: 0.0547 REMARK 3 S21: -0.1017 S22: 0.0019 S23: 0.0906 REMARK 3 S31: -0.2131 S32: 0.0104 S33: -0.0376 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 203 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6608 30.7312 56.4899 REMARK 3 T TENSOR REMARK 3 T11: 0.0160 T22: 0.0663 REMARK 3 T33: 0.1124 T12: 0.0172 REMARK 3 T13: 0.0129 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 3.2276 L22: 0.5815 REMARK 3 L33: 1.4907 L12: 1.3592 REMARK 3 L13: 1.1631 L23: 0.5887 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: -0.0064 S13: 0.2589 REMARK 3 S21: 0.1564 S22: -0.0364 S23: 0.0859 REMARK 3 S31: -0.0042 S32: -0.1016 S33: 0.0213 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 225 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3130 39.4319 52.9017 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.0193 REMARK 3 T33: 0.0541 T12: 0.0592 REMARK 3 T13: 0.0113 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 31.7525 L22: 12.8610 REMARK 3 L33: 11.6579 L12: 12.2780 REMARK 3 L13: 4.9307 L23: 2.3617 REMARK 3 S TENSOR REMARK 3 S11: 0.0364 S12: 0.4775 S13: -0.0364 REMARK 3 S21: -0.2221 S22: 0.1283 S23: 0.4164 REMARK 3 S31: 0.0411 S32: -0.0518 S33: -0.1646 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 226 A 248 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1993 28.1866 60.0114 REMARK 3 T TENSOR REMARK 3 T11: 0.0541 T22: 0.0772 REMARK 3 T33: 0.0440 T12: 0.0021 REMARK 3 T13: 0.0062 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.5142 L22: 2.9701 REMARK 3 L33: 0.1583 L12: 1.6864 REMARK 3 L13: -0.3902 L23: -0.6182 REMARK 3 S TENSOR REMARK 3 S11: 0.0820 S12: -0.0317 S13: -0.0318 REMARK 3 S21: 0.1087 S22: -0.1008 S23: -0.0349 REMARK 3 S31: -0.0593 S32: 0.0412 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 249 A 263 REMARK 3 ORIGIN FOR THE GROUP (A): 46.7722 32.8188 58.5246 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.0531 REMARK 3 T33: 0.0987 T12: 0.0121 REMARK 3 T13: 0.0165 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.0984 L22: 2.6087 REMARK 3 L33: 2.9606 L12: -1.0464 REMARK 3 L13: -0.0114 L23: 0.2350 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0419 S13: -0.1952 REMARK 3 S21: -0.2536 S22: 0.0673 S23: -0.1098 REMARK 3 S31: 0.1065 S32: 0.0445 S33: -0.1204 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 264 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): 48.6500 17.8429 71.5007 REMARK 3 T TENSOR REMARK 3 T11: 0.0577 T22: 0.1085 REMARK 3 T33: 0.0656 T12: 0.0016 REMARK 3 T13: -0.0660 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 5.5175 L22: 7.6161 REMARK 3 L33: 5.0428 L12: 3.8789 REMARK 3 L13: -5.0652 L23: -2.1753 REMARK 3 S TENSOR REMARK 3 S11: -0.0254 S12: -0.3252 S13: -0.1467 REMARK 3 S21: 0.4538 S22: -0.1925 S23: -0.4474 REMARK 3 S31: -0.1687 S32: 0.3586 S33: 0.2179 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 277 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4489 20.6765 58.0684 REMARK 3 T TENSOR REMARK 3 T11: 0.0534 T22: 0.0573 REMARK 3 T33: 0.1023 T12: -0.0043 REMARK 3 T13: 0.0113 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 2.0900 L22: 0.6372 REMARK 3 L33: 5.5300 L12: -0.5572 REMARK 3 L13: 2.5125 L23: -1.3458 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: 0.0437 S13: -0.0160 REMARK 3 S21: 0.0031 S22: -0.0066 S23: -0.0455 REMARK 3 S31: 0.0729 S32: 0.0881 S33: 0.0600 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 295 A 300 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7923 28.9566 44.6893 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: -0.0039 REMARK 3 T33: 0.0627 T12: -0.0140 REMARK 3 T13: 0.0017 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 14.5993 L22: 10.0703 REMARK 3 L33: 15.0278 L12: 4.5749 REMARK 3 L13: -5.9887 L23: 0.8543 REMARK 3 S TENSOR REMARK 3 S11: -0.1969 S12: 0.1563 S13: 0.5053 REMARK 3 S21: -0.9725 S22: 0.0952 S23: -0.0139 REMARK 3 S31: -0.8780 S32: 0.1321 S33: 0.1017 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 20 REMARK 3 ORIGIN FOR THE GROUP (A): 4.1973 16.8907 61.4257 REMARK 3 T TENSOR REMARK 3 T11: 0.0456 T22: 0.1526 REMARK 3 T33: 0.0701 T12: -0.0595 REMARK 3 T13: -0.0058 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 15.7266 L22: 13.6645 REMARK 3 L33: 24.1305 L12: 8.7037 REMARK 3 L13: -10.1211 L23: 2.0339 REMARK 3 S TENSOR REMARK 3 S11: -0.4654 S12: -0.5668 S13: -0.9743 REMARK 3 S21: 1.5743 S22: 0.2270 S23: -0.5310 REMARK 3 S31: 1.3853 S32: -1.6875 S33: 0.2384 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 38 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2875 12.6087 62.2916 REMARK 3 T TENSOR REMARK 3 T11: 0.0326 T22: 0.0999 REMARK 3 T33: 0.0585 T12: -0.0028 REMARK 3 T13: 0.0447 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 3.4309 L22: 0.6050 REMARK 3 L33: 1.2157 L12: -0.7849 REMARK 3 L13: 1.8472 L23: -0.1159 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.0736 S13: -0.1788 REMARK 3 S21: 0.0882 S22: -0.0024 S23: 0.1054 REMARK 3 S31: 0.0383 S32: -0.0724 S33: 0.0085 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 39 B 45 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6002 8.0915 49.6763 REMARK 3 T TENSOR REMARK 3 T11: -0.0691 T22: 0.1110 REMARK 3 T33: 0.1751 T12: 0.0244 REMARK 3 T13: 0.0303 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.8513 L22: 30.7770 REMARK 3 L33: 6.8663 L12: 4.7207 REMARK 3 L13: 2.1019 L23: -3.8031 REMARK 3 S TENSOR REMARK 3 S11: 0.1886 S12: 0.0057 S13: -0.3308 REMARK 3 S21: -0.1364 S22: -0.2157 S23: 1.2043 REMARK 3 S31: 0.2602 S32: -0.0717 S33: 0.0271 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 46 B 77 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5414 10.7078 50.7637 REMARK 3 T TENSOR REMARK 3 T11: 0.0271 T22: 0.0861 REMARK 3 T33: 0.0756 T12: 0.0005 REMARK 3 T13: 0.0070 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 2.4381 L22: 0.9507 REMARK 3 L33: 0.9896 L12: 0.8295 REMARK 3 L13: -0.0840 L23: -0.3687 REMARK 3 S TENSOR REMARK 3 S11: -0.0857 S12: 0.0443 S13: -0.1797 REMARK 3 S21: -0.0268 S22: 0.0053 S23: 0.0761 REMARK 3 S31: 0.0278 S32: -0.0804 S33: 0.0804 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 78 B 124 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3002 4.1721 40.0169 REMARK 3 T TENSOR REMARK 3 T11: 0.0348 T22: 0.0648 REMARK 3 T33: 0.0813 T12: 0.0055 REMARK 3 T13: -0.0005 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.6321 L22: 1.0371 REMARK 3 L33: 1.4668 L12: 0.3996 REMARK 3 L13: -0.0531 L23: 0.0863 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0487 S13: -0.0974 REMARK 3 S21: -0.1104 S22: 0.0002 S23: 0.0269 REMARK 3 S31: -0.0357 S32: 0.0219 S33: 0.0020 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 125 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4041 5.5249 40.8162 REMARK 3 T TENSOR REMARK 3 T11: 0.0163 T22: 0.0693 REMARK 3 T33: 0.0901 T12: 0.0122 REMARK 3 T13: -0.0465 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 2.1026 L22: 3.5173 REMARK 3 L33: 1.3863 L12: -1.5835 REMARK 3 L13: -0.7818 L23: -0.9153 REMARK 3 S TENSOR REMARK 3 S11: 0.1371 S12: 0.1737 S13: -0.3075 REMARK 3 S21: -0.1737 S22: -0.1113 S23: 0.1929 REMARK 3 S31: -0.0594 S32: -0.1953 S33: -0.0257 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 145 B 177 REMARK 3 ORIGIN FOR THE GROUP (A): 24.9628 -5.8984 42.5017 REMARK 3 T TENSOR REMARK 3 T11: 0.0309 T22: 0.0560 REMARK 3 T33: 0.0948 T12: -0.0128 REMARK 3 T13: 0.0160 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.4714 L22: 3.4664 REMARK 3 L33: 1.8500 L12: 0.2517 REMARK 3 L13: -0.1690 L23: -0.3621 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: -0.0390 S13: -0.1333 REMARK 3 S21: 0.1922 S22: -0.0679 S23: 0.1826 REMARK 3 S31: 0.0326 S32: -0.1500 S33: 0.0159 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 178 B 186 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0062 -6.8362 56.1447 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0621 REMARK 3 T33: 0.1549 T12: 0.0601 REMARK 3 T13: 0.0497 T23: 0.0521 REMARK 3 L TENSOR REMARK 3 L11: 0.3262 L22: 9.0167 REMARK 3 L33: 22.0930 L12: -1.6772 REMARK 3 L13: 1.4970 L23: -5.2500 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: -1.3270 S13: -0.0349 REMARK 3 S21: 1.0521 S22: -0.1238 S23: 0.1579 REMARK 3 S31: 0.6304 S32: 0.4646 S33: 0.1076 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 187 B 207 REMARK 3 ORIGIN FOR THE GROUP (A): 33.4303 -7.0147 48.3880 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.0817 REMARK 3 T33: 0.1055 T12: 0.0054 REMARK 3 T13: -0.0003 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 2.7824 L22: 4.5166 REMARK 3 L33: 2.7434 L12: -0.1341 REMARK 3 L13: 0.6227 L23: -0.3301 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: -0.1542 S13: -0.0407 REMARK 3 S21: 0.2650 S22: 0.1290 S23: 0.1197 REMARK 3 S31: 0.2132 S32: -0.0688 S33: -0.0850 REMARK 3 REMARK 3 TLS GROUP : 25 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 208 B 220 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7800 3.6973 64.4593 REMARK 3 T TENSOR REMARK 3 T11: 0.0635 T22: 0.0657 REMARK 3 T33: 0.0508 T12: -0.0226 REMARK 3 T13: 0.0290 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 5.7333 L22: 9.9549 REMARK 3 L33: 3.0352 L12: -5.7512 REMARK 3 L13: -0.9769 L23: 2.1947 REMARK 3 S TENSOR REMARK 3 S11: -0.1057 S12: -0.0651 S13: -0.4907 REMARK 3 S21: 0.3556 S22: -0.1370 S23: 0.3043 REMARK 3 S31: 0.1745 S32: -0.0361 S33: 0.2427 REMARK 3 REMARK 3 TLS GROUP : 26 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 221 B 228 REMARK 3 ORIGIN FOR THE GROUP (A): 38.8270 -6.3105 57.7113 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0676 REMARK 3 T33: 0.0653 T12: -0.0045 REMARK 3 T13: -0.0067 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 7.6388 L22: 12.0670 REMARK 3 L33: 16.2261 L12: -6.1247 REMARK 3 L13: -5.8586 L23: 4.7550 REMARK 3 S TENSOR REMARK 3 S11: 0.1315 S12: -0.4327 S13: 0.0292 REMARK 3 S21: 0.0654 S22: 0.0679 S23: -0.1525 REMARK 3 S31: 0.0478 S32: 0.2585 S33: -0.1994 REMARK 3 REMARK 3 TLS GROUP : 27 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 229 B 248 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2129 9.1792 56.0106 REMARK 3 T TENSOR REMARK 3 T11: 0.0486 T22: 0.0863 REMARK 3 T33: 0.0427 T12: 0.0130 REMARK 3 T13: -0.0076 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.6582 L22: 2.4421 REMARK 3 L33: 0.0296 L12: -1.7557 REMARK 3 L13: -0.1295 L23: 0.2436 REMARK 3 S TENSOR REMARK 3 S11: 0.1002 S12: -0.0482 S13: -0.0608 REMARK 3 S21: -0.1280 S22: -0.0908 S23: 0.0356 REMARK 3 S31: -0.0171 S32: 0.0210 S33: -0.0095 REMARK 3 REMARK 3 TLS GROUP : 28 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 249 B 263 REMARK 3 ORIGIN FOR THE GROUP (A): 42.8022 1.9468 48.1231 REMARK 3 T TENSOR REMARK 3 T11: 0.0329 T22: 0.0636 REMARK 3 T33: 0.1159 T12: 0.0040 REMARK 3 T13: 0.0024 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.1159 L22: 2.0379 REMARK 3 L33: 2.1613 L12: 0.1983 REMARK 3 L13: 0.4153 L23: -0.3583 REMARK 3 S TENSOR REMARK 3 S11: 0.0602 S12: 0.0108 S13: 0.0442 REMARK 3 S21: 0.1604 S22: 0.0107 S23: -0.2269 REMARK 3 S31: -0.2418 S32: 0.0375 S33: -0.0710 REMARK 3 REMARK 3 TLS GROUP : 29 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 264 B 290 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7263 15.6729 43.5317 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0754 REMARK 3 T33: 0.0912 T12: -0.0032 REMARK 3 T13: 0.0245 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.3745 L22: 1.7323 REMARK 3 L33: 3.4084 L12: 0.0449 REMARK 3 L13: 0.2979 L23: -0.7992 REMARK 3 S TENSOR REMARK 3 S11: 0.0763 S12: 0.1080 S13: 0.0228 REMARK 3 S21: -0.2139 S22: -0.0282 S23: -0.0409 REMARK 3 S31: 0.0313 S32: 0.1310 S33: -0.0481 REMARK 3 REMARK 3 TLS GROUP : 30 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 291 B 299 REMARK 3 ORIGIN FOR THE GROUP (A): 40.4927 8.4122 66.1856 REMARK 3 T TENSOR REMARK 3 T11: 0.0736 T22: 0.0328 REMARK 3 T33: 0.0718 T12: 0.0223 REMARK 3 T13: 0.0153 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 10.4521 L22: 10.0728 REMARK 3 L33: 8.6493 L12: 1.1702 REMARK 3 L13: 3.7420 L23: 5.4585 REMARK 3 S TENSOR REMARK 3 S11: -0.0664 S12: -0.2620 S13: -0.5524 REMARK 3 S21: 0.2157 S22: 0.0046 S23: -0.2528 REMARK 3 S31: 0.6795 S32: 0.2429 S33: 0.0618 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040535. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : VARIMAX REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36969 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 81.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M MG(OAC)2, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.29650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 ASP A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 PRO A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ASP A 176 REMARK 465 PRO A 177 REMARK 465 MET A 178 REMARK 465 GLY A 179 REMARK 465 PRO A 180 REMARK 465 ALA A 181 REMARK 465 GLU A 182 REMARK 465 SER A 183 REMARK 465 LEU A 184 REMARK 465 PHE A 185 REMARK 465 LYS A 186 REMARK 465 VAL A 301 REMARK 465 SER A 302 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 PRO B 3 REMARK 465 GLY B 4 REMARK 465 PRO B 5 REMARK 465 ASP B 6 REMARK 465 GLY B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 ALA B 10 REMARK 465 SER B 11 REMARK 465 GLY B 12 REMARK 465 PRO B 13 REMARK 465 ALA B 14 REMARK 465 ASP B 300 REMARK 465 VAL B 301 REMARK 465 SER B 302 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 175 OG REMARK 470 GLN A 269 CG CD OE1 NE2 REMARK 470 MET B 178 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 532 O HOH A 613 2.09 REMARK 500 OD1 ASP B 165 O HOH B 413 2.15 REMARK 500 NH2 ARG B 95 O HOH B 384 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 76 CB GLU B 76 CG 0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 55 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 55 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG B 95 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 95 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 PRO B 177 C - N - CA ANGL. DEV. = 13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 43 87.05 -155.88 REMARK 500 ASN A 93 75.83 -154.77 REMARK 500 HIS A 213 56.68 -146.46 REMARK 500 ILE A 238 106.83 -161.41 REMARK 500 TYR A 278 -53.94 -127.20 REMARK 500 ASN B 93 63.80 -164.24 REMARK 500 SER B 175 -168.01 -67.23 REMARK 500 PRO B 177 -49.68 -23.96 REMARK 500 MET B 178 -167.32 -66.30 REMARK 500 HIS B 213 53.34 -140.05 REMARK 500 ILE B 238 103.32 -169.50 REMARK 500 TYR B 278 -58.35 -124.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S4M A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S4M A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O05 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN SPERMIDINE SYNTHASE IN COMPLEX WITH 5- REMARK 900 METHYLTHIOADENOSINE REMARK 900 RELATED ID: 2O06 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN SPERMIDINE SYNTHASE IN COMPLEX WITH 5- REMARK 900 METHYLTHIOADENOSINE AND 1,4-DIAMINOBUTANE REMARK 900 RELATED ID: 2O07 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN SPERMIDINE SYNTHASE IN COMPLEX WITH 5- REMARK 900 METHYLTHIOADENOSINE AND SPERMIDINE DBREF 2O0L A 1 302 UNP P19623 SPEE_HUMAN 1 302 DBREF 2O0L B 1 302 UNP P19623 SPEE_HUMAN 1 302 SEQADV 2O0L GLY A -1 UNP P19623 CLONING ARTIFACT SEQADV 2O0L SER A 0 UNP P19623 CLONING ARTIFACT SEQADV 2O0L GLY B -1 UNP P19623 CLONING ARTIFACT SEQADV 2O0L SER B 0 UNP P19623 CLONING ARTIFACT SEQRES 1 A 304 GLY SER MET GLU PRO GLY PRO ASP GLY PRO ALA ALA SER SEQRES 2 A 304 GLY PRO ALA ALA ILE ARG GLU GLY TRP PHE ARG GLU THR SEQRES 3 A 304 CYS SER LEU TRP PRO GLY GLN ALA LEU SER LEU GLN VAL SEQRES 4 A 304 GLU GLN LEU LEU HIS HIS ARG ARG SER ARG TYR GLN ASP SEQRES 5 A 304 ILE LEU VAL PHE ARG SER LYS THR TYR GLY ASN VAL LEU SEQRES 6 A 304 VAL LEU ASP GLY VAL ILE GLN CYS THR GLU ARG ASP GLU SEQRES 7 A 304 PHE SER TYR GLN GLU MET ILE ALA ASN LEU PRO LEU CYS SEQRES 8 A 304 SER HIS PRO ASN PRO ARG LYS VAL LEU ILE ILE GLY GLY SEQRES 9 A 304 GLY ASP GLY GLY VAL LEU ARG GLU VAL VAL LYS HIS PRO SEQRES 10 A 304 SER VAL GLU SER VAL VAL GLN CYS GLU ILE ASP GLU ASP SEQRES 11 A 304 VAL ILE GLN VAL SER LYS LYS PHE LEU PRO GLY MET ALA SEQRES 12 A 304 ILE GLY TYR SER SER SER LYS LEU THR LEU HIS VAL GLY SEQRES 13 A 304 ASP GLY PHE GLU PHE MET LYS GLN ASN GLN ASP ALA PHE SEQRES 14 A 304 ASP VAL ILE ILE THR ASP SER SER ASP PRO MET GLY PRO SEQRES 15 A 304 ALA GLU SER LEU PHE LYS GLU SER TYR TYR GLN LEU MET SEQRES 16 A 304 LYS THR ALA LEU LYS GLU ASP GLY VAL LEU CYS CYS GLN SEQRES 17 A 304 GLY GLU CYS GLN TRP LEU HIS LEU ASP LEU ILE LYS GLU SEQRES 18 A 304 MET ARG GLN PHE CYS GLN SER LEU PHE PRO VAL VAL ALA SEQRES 19 A 304 TYR ALA TYR CYS THR ILE PRO THR TYR PRO SER GLY GLN SEQRES 20 A 304 ILE GLY PHE MET LEU CYS SER LYS ASN PRO SER THR ASN SEQRES 21 A 304 PHE GLN GLU PRO VAL GLN PRO LEU THR GLN GLN GLN VAL SEQRES 22 A 304 ALA GLN MET GLN LEU LYS TYR TYR ASN SER ASP VAL HIS SEQRES 23 A 304 ARG ALA ALA PHE VAL LEU PRO GLU PHE ALA ARG LYS ALA SEQRES 24 A 304 LEU ASN ASP VAL SER SEQRES 1 B 304 GLY SER MET GLU PRO GLY PRO ASP GLY PRO ALA ALA SER SEQRES 2 B 304 GLY PRO ALA ALA ILE ARG GLU GLY TRP PHE ARG GLU THR SEQRES 3 B 304 CYS SER LEU TRP PRO GLY GLN ALA LEU SER LEU GLN VAL SEQRES 4 B 304 GLU GLN LEU LEU HIS HIS ARG ARG SER ARG TYR GLN ASP SEQRES 5 B 304 ILE LEU VAL PHE ARG SER LYS THR TYR GLY ASN VAL LEU SEQRES 6 B 304 VAL LEU ASP GLY VAL ILE GLN CYS THR GLU ARG ASP GLU SEQRES 7 B 304 PHE SER TYR GLN GLU MET ILE ALA ASN LEU PRO LEU CYS SEQRES 8 B 304 SER HIS PRO ASN PRO ARG LYS VAL LEU ILE ILE GLY GLY SEQRES 9 B 304 GLY ASP GLY GLY VAL LEU ARG GLU VAL VAL LYS HIS PRO SEQRES 10 B 304 SER VAL GLU SER VAL VAL GLN CYS GLU ILE ASP GLU ASP SEQRES 11 B 304 VAL ILE GLN VAL SER LYS LYS PHE LEU PRO GLY MET ALA SEQRES 12 B 304 ILE GLY TYR SER SER SER LYS LEU THR LEU HIS VAL GLY SEQRES 13 B 304 ASP GLY PHE GLU PHE MET LYS GLN ASN GLN ASP ALA PHE SEQRES 14 B 304 ASP VAL ILE ILE THR ASP SER SER ASP PRO MET GLY PRO SEQRES 15 B 304 ALA GLU SER LEU PHE LYS GLU SER TYR TYR GLN LEU MET SEQRES 16 B 304 LYS THR ALA LEU LYS GLU ASP GLY VAL LEU CYS CYS GLN SEQRES 17 B 304 GLY GLU CYS GLN TRP LEU HIS LEU ASP LEU ILE LYS GLU SEQRES 18 B 304 MET ARG GLN PHE CYS GLN SER LEU PHE PRO VAL VAL ALA SEQRES 19 B 304 TYR ALA TYR CYS THR ILE PRO THR TYR PRO SER GLY GLN SEQRES 20 B 304 ILE GLY PHE MET LEU CYS SER LYS ASN PRO SER THR ASN SEQRES 21 B 304 PHE GLN GLU PRO VAL GLN PRO LEU THR GLN GLN GLN VAL SEQRES 22 B 304 ALA GLN MET GLN LEU LYS TYR TYR ASN SER ASP VAL HIS SEQRES 23 B 304 ARG ALA ALA PHE VAL LEU PRO GLU PHE ALA ARG LYS ALA SEQRES 24 B 304 LEU ASN ASP VAL SER HET S4M A 501 24 HET S4M A 502 24 HETNAM S4M 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'- HETNAM 2 S4M DEOXYADENOSINE FORMUL 3 S4M 2(C14 H24 N6 O3 S) FORMUL 5 HOH *265(H2 O) HELIX 1 1 GLU A 76 CYS A 89 1 14 HELIX 2 2 GLY A 105 VAL A 112 1 8 HELIX 3 3 ASP A 126 LEU A 137 1 12 HELIX 4 4 LEU A 137 ILE A 142 1 6 HELIX 5 5 GLY A 143 SER A 146 5 4 HELIX 6 6 ASP A 155 GLN A 162 1 8 HELIX 7 7 GLU A 187 ALA A 196 1 10 HELIX 8 8 HIS A 213 PHE A 228 1 16 HELIX 9 9 TYR A 241 SER A 243 5 3 HELIX 10 10 THR A 267 MET A 274 1 8 HELIX 11 11 ASN A 280 ALA A 287 1 8 HELIX 12 12 PRO A 291 ASP A 300 1 10 HELIX 13 13 GLU B 76 CYS B 89 1 14 HELIX 14 14 GLY B 105 LYS B 113 1 9 HELIX 15 15 ASP B 126 LEU B 137 1 12 HELIX 16 16 LEU B 137 ILE B 142 1 6 HELIX 17 17 GLY B 143 SER B 146 5 4 HELIX 18 18 ASP B 155 LYS B 161 1 7 HELIX 19 19 MET B 178 LYS B 186 5 9 HELIX 20 20 GLU B 187 ALA B 196 1 10 HELIX 21 21 HIS B 213 PHE B 228 1 16 HELIX 22 22 TYR B 241 SER B 243 5 3 HELIX 23 23 THR B 267 MET B 274 1 8 HELIX 24 24 ASN B 280 ALA B 287 1 8 HELIX 25 25 PRO B 291 ASN B 299 1 9 SHEET 1 A 5 TRP A 20 GLU A 23 0 SHEET 2 A 5 GLN A 31 ARG A 45 -1 O LEU A 35 N PHE A 21 SHEET 3 A 5 GLN B 31 ARG B 45 -1 O ALA B 32 N SER A 34 SHEET 4 A 5 TRP B 20 GLU B 23 -1 N GLU B 23 O LEU B 33 SHEET 5 A 5 ILE B 16 ARG B 17 -1 N ARG B 17 O TRP B 20 SHEET 1 B 8 VAL A 68 THR A 72 0 SHEET 2 B 8 ASN A 61 LEU A 65 -1 N LEU A 63 O GLN A 70 SHEET 3 B 8 ASP A 50 SER A 56 -1 N PHE A 54 O VAL A 62 SHEET 4 B 8 GLN A 31 ARG A 45 -1 N HIS A 42 O VAL A 53 SHEET 5 B 8 GLN B 31 ARG B 45 -1 O ALA B 32 N SER A 34 SHEET 6 B 8 ASP B 50 SER B 56 -1 O VAL B 53 N HIS B 42 SHEET 7 B 8 ASN B 61 LEU B 65 -1 O VAL B 64 N LEU B 52 SHEET 8 B 8 VAL B 68 THR B 72 -1 O GLN B 70 N LEU B 63 SHEET 1 C 7 LEU A 149 VAL A 153 0 SHEET 2 C 7 SER A 119 GLU A 124 1 N GLN A 122 O HIS A 152 SHEET 3 C 7 LYS A 96 GLY A 101 1 N ILE A 99 O VAL A 121 SHEET 4 C 7 PHE A 167 ASP A 173 1 O ILE A 171 N ILE A 100 SHEET 5 C 7 LEU A 197 GLN A 206 1 O LYS A 198 N PHE A 167 SHEET 6 C 7 GLN A 245 SER A 252 -1 O MET A 249 N CYS A 205 SHEET 7 C 7 VAL A 230 THR A 237 -1 N ALA A 234 O PHE A 248 SHEET 1 D 7 LEU B 149 VAL B 153 0 SHEET 2 D 7 SER B 119 GLU B 124 1 N GLN B 122 O HIS B 152 SHEET 3 D 7 LYS B 96 GLY B 101 1 N ILE B 99 O VAL B 121 SHEET 4 D 7 PHE B 167 ASP B 173 1 O ILE B 171 N LEU B 98 SHEET 5 D 7 LEU B 197 GLN B 206 1 O LYS B 198 N PHE B 167 SHEET 6 D 7 GLN B 245 SER B 252 -1 O CYS B 251 N LEU B 203 SHEET 7 D 7 VAL B 230 THR B 237 -1 N ALA B 234 O PHE B 248 SITE 1 AC1 17 GLN A 49 GLN A 70 TYR A 79 GLN A 80 SITE 2 AC1 17 GLY A 101 GLY A 103 ASP A 104 CYS A 123 SITE 3 AC1 17 GLU A 124 ILE A 125 ASP A 126 VAL A 129 SITE 4 AC1 17 GLY A 154 ASP A 155 GLY A 156 ASP A 173 SITE 5 AC1 17 TYR A 241 SITE 1 AC2 22 GLN B 49 LEU B 65 GLN B 70 GLN B 80 SITE 2 AC2 22 GLY B 101 GLY B 103 ASP B 104 CYS B 123 SITE 3 AC2 22 GLU B 124 ILE B 125 ASP B 126 VAL B 129 SITE 4 AC2 22 GLY B 154 ASP B 155 GLY B 156 ASP B 173 SITE 5 AC2 22 SER B 175 PRO B 180 ALA B 181 SER B 183 SITE 6 AC2 22 LEU B 184 TYR B 241 CRYST1 58.323 60.593 86.667 90.00 108.96 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017146 0.000000 0.005890 0.00000 SCALE2 0.000000 0.016504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012200 0.00000