HEADER TRANSCRIPTION 27-NOV-06 2O0M TITLE THE CRYSTAL STRUCTURE OF THE PUTATIVE SORC FAMILY TRANSCRIPTIONAL TITLE 2 REGULATOR FROM ENTEROCOCCUS FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, SORC FAMILY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS SORC FAMILY, TRANSCRIPTIONAL REGULATOR, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,M.ZHOU,M.BARGASSA,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 27-DEC-23 2O0M 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2O0M 1 VERSN REVDAT 2 24-FEB-09 2O0M 1 VERSN REVDAT 1 13-FEB-07 2O0M 0 JRNL AUTH R.ZHANG,M.ZHOU,M.BARGASSA,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE PUTATIVE SORC FAMILY JRNL TITL 2 TRANSCRIPTIONAL REGULATOR FROM ENTEROCOCCUS FAECALIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 33635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2307 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1902 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 377 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 1.48000 REMARK 3 B33 (A**2) : -2.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.546 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1937 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1795 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2614 ; 1.171 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4185 ; 0.762 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 246 ; 5.365 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;35.037 ;25.181 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;13.509 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.039 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 300 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2137 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 356 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 459 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1840 ; 0.194 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 965 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1012 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 278 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.378 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 57 ; 0.280 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 48 ; 0.207 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1499 ; 1.183 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 507 ; 0.348 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1965 ; 1.370 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 795 ; 2.785 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 649 ; 3.726 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 150 REMARK 3 RESIDUE RANGE : A 151 A 200 REMARK 3 RESIDUE RANGE : A 201 A 250 REMARK 3 RESIDUE RANGE : A 251 A 300 REMARK 3 RESIDUE RANGE : A 301 A 341 REMARK 3 ORIGIN FOR THE GROUP (A): -0.8660 26.6510 16.7030 REMARK 3 T TENSOR REMARK 3 T11: 0.0379 T22: 0.0130 REMARK 3 T33: 0.0628 T12: -0.0027 REMARK 3 T13: -0.0145 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.2057 L22: 0.1473 REMARK 3 L33: 0.7431 L12: 0.0129 REMARK 3 L13: -0.1840 L23: -0.0121 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: -0.0161 S13: -0.0061 REMARK 3 S21: 0.0255 S22: 0.0054 S23: -0.0094 REMARK 3 S31: -0.0083 S32: 0.0877 S33: 0.0088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33635 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 56.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 0.2 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.29100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M TRIS, 25% REMARK 280 PEG3350, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.69900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.83000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.69900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.83000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE BIOLOGICAL UNIT OF THE REMARK 300 PROTEIN IS NOT KNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 466 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 LEU A 2 REMARK 465 LYS A 3 REMARK 465 GLU A 4 REMARK 465 PHE A 5 REMARK 465 LYS A 6 REMARK 465 MSE A 7 REMARK 465 ILE A 8 REMARK 465 GLU A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 ALA A 12 REMARK 465 PRO A 13 REMARK 465 ASP A 14 REMARK 465 MSE A 15 REMARK 465 LEU A 16 REMARK 465 ASP A 17 REMARK 465 VAL A 18 REMARK 465 LEU A 19 REMARK 465 GLN A 20 REMARK 465 GLU A 21 REMARK 465 ARG A 22 REMARK 465 PHE A 23 REMARK 465 GLN A 24 REMARK 465 ILE A 25 REMARK 465 LEU A 26 REMARK 465 ARG A 27 REMARK 465 ASN A 28 REMARK 465 ILE A 29 REMARK 465 TYR A 30 REMARK 465 TRP A 31 REMARK 465 MSE A 32 REMARK 465 GLN A 33 REMARK 465 PRO A 34 REMARK 465 ILE A 35 REMARK 465 GLY A 36 REMARK 465 ARG A 37 REMARK 465 ARG A 38 REMARK 465 SER A 39 REMARK 465 LEU A 40 REMARK 465 SER A 41 REMARK 465 GLU A 42 REMARK 465 THR A 43 REMARK 465 MSE A 44 REMARK 465 GLY A 45 REMARK 465 ILE A 46 REMARK 465 THR A 47 REMARK 465 GLU A 48 REMARK 465 ARG A 49 REMARK 465 VAL A 50 REMARK 465 LEU A 51 REMARK 465 ARG A 52 REMARK 465 THR A 53 REMARK 465 GLU A 54 REMARK 465 THR A 55 REMARK 465 ASP A 56 REMARK 465 VAL A 57 REMARK 465 LEU A 58 REMARK 465 LYS A 59 REMARK 465 GLN A 60 REMARK 465 LEU A 61 REMARK 465 ASN A 62 REMARK 465 LEU A 63 REMARK 465 ILE A 64 REMARK 465 GLU A 65 REMARK 465 PRO A 66 REMARK 465 SER A 67 REMARK 465 LYS A 68 REMARK 465 SER A 69 REMARK 465 GLY A 70 REMARK 465 MSE A 71 REMARK 465 THR A 72 REMARK 465 LEU A 73 REMARK 465 THR A 74 REMARK 465 GLU A 75 REMARK 465 ARG A 76 REMARK 465 GLY A 77 REMARK 465 LEU A 78 REMARK 465 GLU A 79 REMARK 465 VAL A 80 REMARK 465 TYR A 81 REMARK 465 GLN A 82 REMARK 465 GLY A 83 REMARK 465 LEU A 84 REMARK 465 GLU A 85 REMARK 465 LEU A 86 REMARK 465 VAL A 87 REMARK 465 MSE A 88 REMARK 465 ASN A 89 REMARK 465 GLN A 90 REMARK 465 LEU A 91 REMARK 465 LEU A 92 REMARK 465 GLY A 93 REMARK 465 MSE A 94 REMARK 465 GLY A 342 REMARK 465 VAL A 343 REMARK 465 THR A 344 REMARK 465 LEU A 345 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 477 O HOH A 774 1.94 REMARK 500 OH TYR A 104 O2 PO4 A 402 2.08 REMARK 500 N HIS A 95 O HOH A 769 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 560 O HOH A 773 2556 2.01 REMARK 500 CD2 TYR A 207 CD2 TYR A 207 2556 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC85103 RELATED DB: TARGETDB DBREF 2O0M A 1 345 UNP Q833I7 Q833I7_ENTFA 1 345 SEQADV 2O0M MSE A 1 UNP Q833I7 MET 1 MODIFIED RESIDUE SEQADV 2O0M MSE A 7 UNP Q833I7 MET 7 MODIFIED RESIDUE SEQADV 2O0M MSE A 15 UNP Q833I7 MET 15 MODIFIED RESIDUE SEQADV 2O0M MSE A 32 UNP Q833I7 MET 32 MODIFIED RESIDUE SEQADV 2O0M MSE A 44 UNP Q833I7 MET 44 MODIFIED RESIDUE SEQADV 2O0M MSE A 71 UNP Q833I7 MET 71 MODIFIED RESIDUE SEQADV 2O0M MSE A 88 UNP Q833I7 MET 88 MODIFIED RESIDUE SEQADV 2O0M MSE A 94 UNP Q833I7 MET 94 MODIFIED RESIDUE SEQADV 2O0M MSE A 101 UNP Q833I7 MET 101 MODIFIED RESIDUE SEQADV 2O0M MSE A 149 UNP Q833I7 MET 149 MODIFIED RESIDUE SEQADV 2O0M MSE A 154 UNP Q833I7 MET 154 MODIFIED RESIDUE SEQADV 2O0M MSE A 156 UNP Q833I7 MET 156 MODIFIED RESIDUE SEQADV 2O0M MSE A 161 UNP Q833I7 MET 161 MODIFIED RESIDUE SEQADV 2O0M MSE A 195 UNP Q833I7 MET 195 MODIFIED RESIDUE SEQADV 2O0M MSE A 249 UNP Q833I7 MET 249 MODIFIED RESIDUE SEQADV 2O0M MSE A 255 UNP Q833I7 MET 255 MODIFIED RESIDUE SEQADV 2O0M MSE A 260 UNP Q833I7 MET 260 MODIFIED RESIDUE SEQADV 2O0M MSE A 262 UNP Q833I7 MET 262 MODIFIED RESIDUE SEQADV 2O0M MSE A 320 UNP Q833I7 MET 320 MODIFIED RESIDUE SEQRES 1 A 345 MSE LEU LYS GLU PHE LYS MSE ILE GLU ALA VAL ALA PRO SEQRES 2 A 345 ASP MSE LEU ASP VAL LEU GLN GLU ARG PHE GLN ILE LEU SEQRES 3 A 345 ARG ASN ILE TYR TRP MSE GLN PRO ILE GLY ARG ARG SER SEQRES 4 A 345 LEU SER GLU THR MSE GLY ILE THR GLU ARG VAL LEU ARG SEQRES 5 A 345 THR GLU THR ASP VAL LEU LYS GLN LEU ASN LEU ILE GLU SEQRES 6 A 345 PRO SER LYS SER GLY MSE THR LEU THR GLU ARG GLY LEU SEQRES 7 A 345 GLU VAL TYR GLN GLY LEU GLU LEU VAL MSE ASN GLN LEU SEQRES 8 A 345 LEU GLY MSE HIS GLN ILE GLU LYS GLU MSE THR GLN TYR SEQRES 9 A 345 PHE GLY ILE GLN ARG CYS ILE VAL VAL ALA GLY ASP SER SEQRES 10 A 345 ASP ILE GLN LYS LYS VAL LEU SER ASP PHE GLY ASP VAL SEQRES 11 A 345 LEU THR ASN THR LEU ASN LEU LEU LEU PRO ASN GLY GLU SEQRES 12 A 345 ASN THR ILE ALA VAL MSE GLY GLY THR THR MSE ALA MSE SEQRES 13 A 345 VAL ALA GLU ASN MSE GLY SER LEU GLU THR GLU LYS ARG SEQRES 14 A 345 HIS ASN LEU PHE VAL PRO ALA ARG GLY GLY ILE GLY GLU SEQRES 15 A 345 ALA VAL SER VAL GLN ALA ASN SER ILE SER ALA VAL MSE SEQRES 16 A 345 ALA ASN LYS THR GLY GLY ASN TYR ARG ALA LEU TYR VAL SEQRES 17 A 345 PRO GLU GLN LEU SER ARG GLU THR TYR ASN SER LEU LEU SEQRES 18 A 345 GLN GLU PRO SER ILE GLN GLU VAL LEU THR LEU ILE SER SEQRES 19 A 345 HIS ALA ASN CYS VAL VAL HIS SER ILE GLY ARG ALA LEU SEQRES 20 A 345 HIS MSE ALA ALA ARG ARG LYS MSE SER ASP ASP GLU MSE SEQRES 21 A 345 VAL MSE LEU LYS GLN LYS ASN ALA VAL ALA GLU SER PHE SEQRES 22 A 345 GLY TYR PHE PHE ASP GLU GLU GLY LYS VAL VAL TYR LYS SEQRES 23 A 345 ILE PRO ARG ILE GLY LEU GLN LEU LYS ASN LEU GLN GLU SEQRES 24 A 345 ILE PRO TYR VAL VAL ALA ILE ALA GLY GLY LYS THR LYS SEQRES 25 A 345 ALA LYS ALA ILE ARG ALA TYR MSE LYS ASN ALA PRO LYS SEQRES 26 A 345 GLN THR TRP LEU ILE THR ASP GLU ALA ALA ALA ASN GLU SEQRES 27 A 345 ILE LEU LYS GLY VAL THR LEU MODRES 2O0M MSE A 101 MET SELENOMETHIONINE MODRES 2O0M MSE A 149 MET SELENOMETHIONINE MODRES 2O0M MSE A 154 MET SELENOMETHIONINE MODRES 2O0M MSE A 156 MET SELENOMETHIONINE MODRES 2O0M MSE A 161 MET SELENOMETHIONINE MODRES 2O0M MSE A 195 MET SELENOMETHIONINE MODRES 2O0M MSE A 249 MET SELENOMETHIONINE MODRES 2O0M MSE A 255 MET SELENOMETHIONINE MODRES 2O0M MSE A 260 MET SELENOMETHIONINE MODRES 2O0M MSE A 262 MET SELENOMETHIONINE MODRES 2O0M MSE A 320 MET SELENOMETHIONINE HET MSE A 101 8 HET MSE A 149 8 HET MSE A 154 8 HET MSE A 156 8 HET MSE A 161 8 HET MSE A 195 8 HET MSE A 249 8 HET MSE A 255 8 HET MSE A 260 8 HET MSE A 262 8 HET MSE A 320 8 HET PO4 A 401 5 HET PO4 A 402 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 HOH *377(H2 O) HELIX 1 1 HIS A 95 GLY A 106 1 12 HELIX 2 2 LYS A 121 LEU A 139 1 19 HELIX 3 3 GLY A 151 ASN A 160 1 10 HELIX 4 4 ALA A 183 VAL A 186 5 4 HELIX 5 5 GLN A 187 GLY A 200 1 14 HELIX 6 6 SER A 213 GLN A 222 1 10 HELIX 7 7 GLU A 223 HIS A 235 1 13 HELIX 8 8 ALA A 246 ARG A 253 1 8 HELIX 9 9 SER A 256 LYS A 266 1 11 HELIX 10 10 GLN A 293 ILE A 300 5 8 HELIX 11 11 GLY A 309 THR A 311 5 3 HELIX 12 12 LYS A 312 LYS A 321 1 10 HELIX 13 13 GLU A 333 LEU A 340 1 8 SHEET 1 A 7 ARG A 109 VAL A 113 0 SHEET 2 A 7 TRP A 328 ASP A 332 1 O THR A 331 N VAL A 113 SHEET 3 A 7 TYR A 302 ILE A 306 1 N ALA A 305 O ILE A 330 SHEET 4 A 7 CYS A 238 HIS A 241 1 N HIS A 241 O ILE A 306 SHEET 5 A 7 GLY A 142 VAL A 148 1 N ALA A 147 O CYS A 238 SHEET 6 A 7 ARG A 169 PRO A 175 1 O LEU A 172 N ILE A 146 SHEET 7 A 7 ASN A 202 TYR A 203 1 O ASN A 202 N PHE A 173 SHEET 1 B 4 GLY A 244 ARG A 245 0 SHEET 2 B 4 ALA A 270 SER A 272 -1 O GLU A 271 N GLY A 244 SHEET 3 B 4 TYR A 275 PHE A 277 -1 O PHE A 277 N ALA A 270 SHEET 4 B 4 VAL A 283 LYS A 286 -1 O TYR A 285 N PHE A 276 LINK C GLU A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N THR A 102 1555 1555 1.33 LINK C VAL A 148 N MSE A 149 1555 1555 1.33 LINK C MSE A 149 N GLY A 150 1555 1555 1.33 LINK C THR A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N ALA A 155 1555 1555 1.33 LINK C ALA A 155 N MSE A 156 1555 1555 1.32 LINK C MSE A 156 N VAL A 157 1555 1555 1.33 LINK C ASN A 160 N MSE A 161 1555 1555 1.33 LINK C MSE A 161 N GLY A 162 1555 1555 1.33 LINK C VAL A 194 N MSE A 195 1555 1555 1.33 LINK C MSE A 195 N ALA A 196 1555 1555 1.33 LINK C HIS A 248 N MSE A 249 1555 1555 1.34 LINK C MSE A 249 N ALA A 250 1555 1555 1.33 LINK C LYS A 254 N MSE A 255 1555 1555 1.33 LINK C MSE A 255 N SER A 256 1555 1555 1.33 LINK C GLU A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N VAL A 261 1555 1555 1.33 LINK C VAL A 261 N MSE A 262 1555 1555 1.33 LINK C MSE A 262 N LEU A 263 1555 1555 1.33 LINK C TYR A 319 N MSE A 320 1555 1555 1.33 LINK C MSE A 320 N LYS A 321 1555 1555 1.34 SITE 1 AC1 10 GLY A 151 THR A 152 THR A 153 MSE A 249 SITE 2 AC1 10 ARG A 252 LYS A 312 HOH A 407 HOH A 413 SITE 3 AC1 10 HOH A 427 HOH A 561 SITE 1 AC2 5 TYR A 104 ARG A 317 LYS A 321 HOH A 418 SITE 2 AC2 5 HOH A 519 CRYST1 115.398 41.660 64.267 90.00 118.48 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008666 0.000000 0.004701 0.00000 SCALE2 0.000000 0.024004 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017702 0.00000