HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-NOV-06 2O16 TITLE CRYSTAL STRUCTURE OF A PUTATIVE ACETOIN UTILIZATION PROTEIN (ACUB) TITLE 2 FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETOIN UTILIZATION PROTEIN ACUB, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: VC0737; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,J.B.BONANNO,M.RUTTER,K.T.BAIN,A.POWELL,A.SLOCOMBE, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 8 30-AUG-23 2O16 1 REMARK REVDAT 7 03-FEB-21 2O16 1 AUTHOR JRNL REMARK SEQADV REVDAT 6 14-NOV-18 2O16 1 AUTHOR REVDAT 5 18-OCT-17 2O16 1 REMARK REVDAT 4 24-OCT-12 2O16 1 AUTHOR JRNL REVDAT 3 13-JUL-11 2O16 1 VERSN REVDAT 2 24-FEB-09 2O16 1 VERSN REVDAT 1 12-DEC-06 2O16 0 JRNL AUTH Y.PATSKOVSKY,J.B.BONANNO,M.RUTTER,K.T.BAIN,A.POWELL, JRNL AUTH 2 A.SLOCOMBE,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ACETOIN UTILIZATION PROTEIN JRNL TITL 2 (ACUB) FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 22408 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 722 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 225 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : 0.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.61000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.821 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2157 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2929 ; 1.360 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 5.060 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;32.633 ;25.402 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;12.293 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;14.106 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 360 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1519 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1006 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1499 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 195 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 86 ; 0.196 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.259 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1409 ; 1.189 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2192 ; 1.771 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 839 ; 2.663 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 734 ; 4.119 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2O16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22430 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : 0.48100 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XKF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS PH 8.5, 2M AMMONIUM REMARK 280 PHOSPHATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.00300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROBABLE MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 29.00300 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 17 REMARK 465 ARG A 83 REMARK 465 SER A 84 REMARK 465 ALA A 85 REMARK 465 GLN A 86 REMARK 465 GLY A 87 REMARK 465 ASP A 88 REMARK 465 SER A 89 REMARK 465 LEU A 90 REMARK 465 ALA A 91 REMARK 465 SER A 159 REMARK 465 GLU A 160 REMARK 465 PRO A 161 REMARK 465 ASP A 162 REMARK 465 GLU A 163 REMARK 465 LEU A 164 REMARK 465 ASP A 165 REMARK 465 GLU A 166 REMARK 465 GLU A 167 REMARK 465 GLN A 168 REMARK 465 GLU A 169 REMARK 465 GLY A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 MET B 17 REMARK 465 SER B 18 REMARK 465 LEU B 81 REMARK 465 GLN B 82 REMARK 465 ARG B 83 REMARK 465 SER B 84 REMARK 465 ALA B 85 REMARK 465 GLN B 86 REMARK 465 GLY B 87 REMARK 465 ASP B 88 REMARK 465 ASP B 162 REMARK 465 GLU B 163 REMARK 465 LEU B 164 REMARK 465 ASP B 165 REMARK 465 GLU B 166 REMARK 465 GLU B 167 REMARK 465 GLN B 168 REMARK 465 GLU B 169 REMARK 465 GLY B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 142 O4 PO4 A 6 1.81 REMARK 500 OD1 ASP A 142 O HOH A 247 1.90 REMARK 500 O HOH A 183 O HOH A 291 2.11 REMARK 500 OH TYR A 119 O HOH A 296 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 93 O HOH B 224 2645 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 81 88.31 -67.03 REMARK 500 ASP A 134 -24.46 70.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-3506H RELATED DB: TARGETDB DBREF 2O16 A 20 168 UNP Q9KTZ3 Q9KTZ3_VIBCH 21 169 DBREF 2O16 B 20 168 UNP Q9KTZ3 Q9KTZ3_VIBCH 21 169 SEQADV 2O16 MET A 17 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 SER A 18 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 LEU A 19 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 GLU A 169 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 GLY A 170 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 HIS A 171 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS A 172 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS A 173 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS A 174 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS A 175 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS A 176 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 MET B 17 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 SER B 18 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 LEU B 19 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 GLU B 169 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 GLY B 170 UNP Q9KTZ3 CLONING ARTIFACT SEQADV 2O16 HIS B 171 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS B 172 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS B 173 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS B 174 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS B 175 UNP Q9KTZ3 EXPRESSION TAG SEQADV 2O16 HIS B 176 UNP Q9KTZ3 EXPRESSION TAG SEQRES 1 A 160 MET SER LEU MET ILE LYS VAL GLU ASP MET MET THR ARG SEQRES 2 A 160 HIS PRO HIS THR LEU LEU ARG THR HIS THR LEU ASN ASP SEQRES 3 A 160 ALA LYS HIS LEU MET GLU ALA LEU ASP ILE ARG HIS VAL SEQRES 4 A 160 PRO ILE VAL ASP ALA ASN LYS LYS LEU LEU GLY ILE VAL SEQRES 5 A 160 SER GLN ARG ASP LEU LEU ALA ALA GLN GLU SER SER LEU SEQRES 6 A 160 GLN ARG SER ALA GLN GLY ASP SER LEU ALA PHE GLU THR SEQRES 7 A 160 PRO LEU PHE GLU VAL MET HIS THR ASP VAL THR SER VAL SEQRES 8 A 160 ALA PRO GLN ALA GLY LEU LYS GLU SER ALA ILE TYR MET SEQRES 9 A 160 GLN LYS HIS LYS ILE GLY CYS LEU PRO VAL VAL ALA LYS SEQRES 10 A 160 ASP VAL LEU VAL GLY ILE ILE THR ASP SER ASP PHE VAL SEQRES 11 A 160 THR ILE ALA ILE ASN LEU LEU GLU LEU GLN GLU GLU SER SEQRES 12 A 160 GLU PRO ASP GLU LEU ASP GLU GLU GLN GLU GLY HIS HIS SEQRES 13 A 160 HIS HIS HIS HIS SEQRES 1 B 160 MET SER LEU MET ILE LYS VAL GLU ASP MET MET THR ARG SEQRES 2 B 160 HIS PRO HIS THR LEU LEU ARG THR HIS THR LEU ASN ASP SEQRES 3 B 160 ALA LYS HIS LEU MET GLU ALA LEU ASP ILE ARG HIS VAL SEQRES 4 B 160 PRO ILE VAL ASP ALA ASN LYS LYS LEU LEU GLY ILE VAL SEQRES 5 B 160 SER GLN ARG ASP LEU LEU ALA ALA GLN GLU SER SER LEU SEQRES 6 B 160 GLN ARG SER ALA GLN GLY ASP SER LEU ALA PHE GLU THR SEQRES 7 B 160 PRO LEU PHE GLU VAL MET HIS THR ASP VAL THR SER VAL SEQRES 8 B 160 ALA PRO GLN ALA GLY LEU LYS GLU SER ALA ILE TYR MET SEQRES 9 B 160 GLN LYS HIS LYS ILE GLY CYS LEU PRO VAL VAL ALA LYS SEQRES 10 B 160 ASP VAL LEU VAL GLY ILE ILE THR ASP SER ASP PHE VAL SEQRES 11 B 160 THR ILE ALA ILE ASN LEU LEU GLU LEU GLN GLU GLU SER SEQRES 12 B 160 GLU PRO ASP GLU LEU ASP GLU GLU GLN GLU GLY HIS HIS SEQRES 13 B 160 HIS HIS HIS HIS HET PO4 A 1 5 HET PO4 A 6 5 HET PO4 A 7 5 HET PO4 B 2 5 HET PO4 B 3 5 HET PO4 B 4 5 HET PO4 B 5 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 7(O4 P 3-) FORMUL 10 HOH *225(H2 O) HELIX 1 1 LYS A 22 MET A 26 5 5 HELIX 2 2 THR A 39 ASP A 51 1 13 HELIX 3 3 GLN A 70 LEU A 81 1 12 HELIX 4 4 PRO A 95 MET A 100 1 6 HELIX 5 5 GLY A 112 HIS A 123 1 12 HELIX 6 6 THR A 141 GLU A 158 1 18 HELIX 7 7 LYS B 22 MET B 27 1 6 HELIX 8 8 THR B 39 ASP B 51 1 13 HELIX 9 9 GLN B 70 SER B 80 1 11 HELIX 10 10 LEU B 90 THR B 94 5 5 HELIX 11 11 PRO B 95 VAL B 99 5 5 HELIX 12 12 GLY B 112 HIS B 123 1 12 HELIX 13 13 ASP B 144 SER B 159 1 16 SHEET 1 A 3 THR A 28 ARG A 29 0 SHEET 2 A 3 VAL A 135 ILE A 140 -1 O ILE A 139 N THR A 28 SHEET 3 A 3 LEU A 128 ALA A 132 -1 N VAL A 130 O GLY A 138 SHEET 1 B 2 HIS A 54 VAL A 58 0 SHEET 2 B 2 LEU A 64 SER A 69 -1 O LEU A 65 N ILE A 57 SHEET 1 C 2 VAL A 104 SER A 106 0 SHEET 2 C 2 VAL B 104 SER B 106 -1 O SER B 106 N VAL A 104 SHEET 1 D 3 THR B 28 ARG B 29 0 SHEET 2 D 3 VAL B 135 THR B 141 -1 O ILE B 139 N THR B 28 SHEET 3 D 3 CYS B 127 ALA B 132 -1 N LEU B 128 O ILE B 140 SHEET 1 E 3 LEU B 34 LEU B 35 0 SHEET 2 E 3 HIS B 54 VAL B 58 1 O VAL B 58 N LEU B 34 SHEET 3 E 3 LEU B 64 SER B 69 -1 O LEU B 65 N ILE B 57 SITE 1 AC1 8 ILE A 52 ARG A 53 HIS A 54 THR A 141 SITE 2 AC1 8 ASP A 142 SER A 143 HOH A 189 HOH A 274 SITE 1 AC2 7 ILE B 52 ARG B 53 HIS B 54 THR B 141 SITE 2 AC2 7 ASP B 142 SER B 143 HOH B 208 SITE 1 AC3 10 TYR A 119 LYS A 122 HOH A 200 PO4 B 4 SITE 2 AC3 10 SER B 69 ARG B 71 ASP B 72 HIS B 101 SITE 3 AC3 10 HOH B 180 HOH B 203 SITE 1 AC4 9 TYR A 119 LYS A 122 HIS A 123 PO4 B 3 SITE 2 AC4 9 PO4 B 5 HIS B 54 SER B 69 HIS B 101 SITE 3 AC4 9 HOH B 196 SITE 1 AC5 9 LYS A 122 HIS A 123 PO4 B 4 ARG B 53 SITE 2 AC5 9 HIS B 54 LYS B 124 GLY B 126 HOH B 180 SITE 3 AC5 9 HOH B 191 SITE 1 AC6 4 ARG A 53 ASP A 142 HOH A 265 HOH A 271 SITE 1 AC7 7 SER A 69 ARG A 71 ASP A 72 HIS A 101 SITE 2 AC7 7 HOH A 196 HOH A 293 LYS B 122 CRYST1 49.677 58.006 53.561 90.00 108.85 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020130 0.000000 0.006871 0.00000 SCALE2 0.000000 0.017240 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019728 0.00000