HEADER STRUCTURAL PROTEIN 30-NOV-06 2O2T TITLE THE CRYSTAL STRUCTURE OF THE 1ST PDZ DOMAIN OF MPDZ COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIPLE PDZ DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FIRST PDZ DOMAIN; COMPND 5 SYNONYM: MULTI PDZ DOMAIN PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MPDZ, MUPP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS STRUCTURAL PROTEIN, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR E.PAPAGRIGORIOU,C.GILEADI,C.PHILLIPS,C.JOHANSSON,E.SALAH,P.SAVITSKY, AUTHOR 2 F.GORREC,C.UMEANO,G.BERRIDGE,A.C.W.PIKE,J.ELKINS,A.EDWARDS, AUTHOR 3 C.ARROWSMITH,J.WEIGELT,M.SUNDSTROM,D.A.DOYLE,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 4 27-DEC-23 2O2T 1 SEQADV REVDAT 3 13-JUL-11 2O2T 1 VERSN REVDAT 2 24-FEB-09 2O2T 1 VERSN REVDAT 1 12-DEC-06 2O2T 0 JRNL AUTH E.PAPAGRIGORIOU,C.GILEADI,C.PHILLIPS,J.ELKINS,C.JOHANSSON, JRNL AUTH 2 E.SALAH,P.SAVITSKY,G.BERRIDGE,D.A.DOYLE JRNL TITL THE CRYSTAL STRUCTURE OF THE 1ST PDZ DOMAIN OF MPDZ JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 390 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 555 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 23 REMARK 3 BIN FREE R VALUE : 0.4260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.67000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -5.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.754 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.370 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.299 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.678 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1631 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1058 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2207 ; 1.250 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2605 ; 0.880 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 215 ; 5.884 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 66 ;35.494 ;25.152 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 272 ;17.449 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.653 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 266 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1836 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 300 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 331 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1091 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 791 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 931 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 44 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.111 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 22 ; 0.151 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.293 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1113 ; 0.334 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 450 ; 0.117 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1719 ; 0.503 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 569 ; 1.004 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 488 ; 1.664 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 119 A 158 2 REMARK 3 1 B 121 B 158 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 220 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 222 ; 0.46 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 220 ; 0.06 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 222 ; 0.28 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 163 A 231 2 REMARK 3 1 B 163 B 231 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 408 ; 0.03 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 408 ; 0.73 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 408 ; 0.06 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 408 ; 0.35 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0658 -0.3467 32.8807 REMARK 3 T TENSOR REMARK 3 T11: 0.1207 T22: 0.0394 REMARK 3 T33: -0.0133 T12: -0.0195 REMARK 3 T13: 0.0296 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 4.5143 L22: 5.5893 REMARK 3 L33: 6.6441 L12: -0.8614 REMARK 3 L13: -1.6639 L23: 1.4371 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: 0.2413 S13: -0.0598 REMARK 3 S21: 0.0027 S22: -0.1177 S23: 0.2583 REMARK 3 S31: 0.0567 S32: -0.5955 S33: 0.1673 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 121 B 231 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7618 6.6235 9.5408 REMARK 3 T TENSOR REMARK 3 T11: -0.0103 T22: 0.1705 REMARK 3 T33: 0.0436 T12: -0.0417 REMARK 3 T13: -0.0553 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.1080 L22: 7.0351 REMARK 3 L33: 6.7973 L12: 0.3469 REMARK 3 L13: -1.5141 L23: -2.6811 REMARK 3 S TENSOR REMARK 3 S11: -0.0090 S12: -0.0483 S13: 0.0233 REMARK 3 S21: 0.1877 S22: -0.1798 S23: -0.3720 REMARK 3 S31: -0.1456 S32: 0.7692 S33: 0.1888 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040615. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8029 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.08350 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.51290 REMARK 200 R SYM FOR SHELL (I) : 0.54500 REMARK 200 FOR SHELL : 1.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5% JEFFAMINE 2001, 1.1M SODIUM REMARK 280 MALONATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.18300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.18300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EACH MONOMER REPRESENTS THE BIOLOGICAL ASSEMBLY. TWO REMARK 300 BIOLOGICAL UNITS IN THE ASU REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 115 REMARK 465 MET A 116 REMARK 465 PRO A 117 REMARK 465 ALA A 118 REMARK 465 ARG A 160 REMARK 465 GLY A 161 REMARK 465 SER B 115 REMARK 465 MET B 116 REMARK 465 PRO B 117 REMARK 465 ALA B 118 REMARK 465 CYS B 119 REMARK 465 ASP B 120 REMARK 465 ASN B 159 REMARK 465 ARG B 160 REMARK 465 GLY B 161 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 119 SG REMARK 470 ASP A 120 CG OD1 OD2 REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 LEU A 125 CD1 CD2 REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 ASN A 159 CG OD1 ND2 REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 GLN A 198 CD OE1 NE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 213 CE NZ REMARK 470 GLU B 121 CG CD OE1 OE2 REMARK 470 PHE B 122 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP B 123 CG OD1 OD2 REMARK 470 GLN B 124 CD OE1 NE2 REMARK 470 LYS B 127 CD CE NZ REMARK 470 GLU B 136 CD OE1 OE2 REMARK 470 ARG B 156 CD NE CZ NH1 NH2 REMARK 470 GLU B 162 CD OE1 OE2 REMARK 470 ILE B 165 CD1 REMARK 470 GLN B 168 CD OE1 NE2 REMARK 470 LYS B 183 CE NZ REMARK 470 ASP B 197 OD1 OD2 REMARK 470 GLN B 198 CG CD OE1 NE2 REMARK 470 GLN B 204 CG CD OE1 NE2 REMARK 470 LYS B 211 CD CE NZ REMARK 470 LYS B 213 NZ REMARK 470 ARG B 222 CD NE CZ NH1 NH2 REMARK 470 SER B 224 OG REMARK 470 TYR B 229 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 230 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 168 -62.09 -107.68 REMARK 500 THR A 185 -14.15 96.43 REMARK 500 ASP A 214 -128.48 55.81 REMARK 500 SER B 157 -157.45 -97.03 REMARK 500 THR B 185 -12.85 92.13 REMARK 500 ASP B 214 -129.82 56.34 REMARK 500 SER B 224 -168.46 -113.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 2O2T A 117 227 UNP O75970 MPDZ_HUMAN 117 227 DBREF 2O2T B 117 227 UNP O75970 MPDZ_HUMAN 117 227 SEQADV 2O2T SER A 115 UNP O75970 CLONING ARTIFACT SEQADV 2O2T MET A 116 UNP O75970 CLONING ARTIFACT SEQADV 2O2T TYR A 228 UNP O75970 CLONING ARTIFACT SEQADV 2O2T TYR A 229 UNP O75970 CLONING ARTIFACT SEQADV 2O2T LYS A 230 UNP O75970 CLONING ARTIFACT SEQADV 2O2T VAL A 231 UNP O75970 CLONING ARTIFACT SEQADV 2O2T SER B 115 UNP O75970 CLONING ARTIFACT SEQADV 2O2T MET B 116 UNP O75970 CLONING ARTIFACT SEQADV 2O2T TYR B 228 UNP O75970 CLONING ARTIFACT SEQADV 2O2T TYR B 229 UNP O75970 CLONING ARTIFACT SEQADV 2O2T LYS B 230 UNP O75970 CLONING ARTIFACT SEQADV 2O2T VAL B 231 UNP O75970 CLONING ARTIFACT SEQRES 1 A 117 SER MET PRO ALA CYS ASP GLU PHE ASP GLN LEU ILE LYS SEQRES 2 A 117 ASN MET ALA GLN GLY ARG HIS VAL GLU VAL PHE GLU LEU SEQRES 3 A 117 LEU LYS PRO PRO SER GLY GLY LEU GLY PHE SER VAL VAL SEQRES 4 A 117 GLY LEU ARG SER GLU ASN ARG GLY GLU LEU GLY ILE PHE SEQRES 5 A 117 VAL GLN GLU ILE GLN GLU GLY SER VAL ALA HIS ARG ASP SEQRES 6 A 117 GLY ARG LEU LYS GLU THR ASP GLN ILE LEU ALA ILE ASN SEQRES 7 A 117 GLY GLN ALA LEU ASP GLN THR ILE THR HIS GLN GLN ALA SEQRES 8 A 117 ILE SER ILE LEU GLN LYS ALA LYS ASP THR VAL GLN LEU SEQRES 9 A 117 VAL ILE ALA ARG GLY SER LEU PRO GLN TYR TYR LYS VAL SEQRES 1 B 117 SER MET PRO ALA CYS ASP GLU PHE ASP GLN LEU ILE LYS SEQRES 2 B 117 ASN MET ALA GLN GLY ARG HIS VAL GLU VAL PHE GLU LEU SEQRES 3 B 117 LEU LYS PRO PRO SER GLY GLY LEU GLY PHE SER VAL VAL SEQRES 4 B 117 GLY LEU ARG SER GLU ASN ARG GLY GLU LEU GLY ILE PHE SEQRES 5 B 117 VAL GLN GLU ILE GLN GLU GLY SER VAL ALA HIS ARG ASP SEQRES 6 B 117 GLY ARG LEU LYS GLU THR ASP GLN ILE LEU ALA ILE ASN SEQRES 7 B 117 GLY GLN ALA LEU ASP GLN THR ILE THR HIS GLN GLN ALA SEQRES 8 B 117 ILE SER ILE LEU GLN LYS ALA LYS ASP THR VAL GLN LEU SEQRES 9 B 117 VAL ILE ALA ARG GLY SER LEU PRO GLN TYR TYR LYS VAL FORMUL 3 HOH *25(H2 O) HELIX 1 1 CYS A 119 GLN A 131 1 13 HELIX 2 2 SER A 174 GLY A 180 1 7 HELIX 3 3 THR A 201 ALA A 212 1 12 HELIX 4 4 LEU A 225 LYS A 230 5 6 HELIX 5 5 GLU B 121 GLN B 131 1 11 HELIX 6 6 SER B 174 GLY B 180 1 7 HELIX 7 7 THR B 201 ALA B 212 1 12 HELIX 8 8 LEU B 225 LYS B 230 5 6 SHEET 1 A 5 VAL A 135 LEU A 141 0 SHEET 2 A 5 THR A 215 ALA A 221 -1 O ILE A 220 N GLU A 136 SHEET 3 A 5 GLN A 187 ILE A 191 -1 N LEU A 189 O VAL A 219 SHEET 4 A 5 LEU A 163 VAL A 167 -1 N ILE A 165 O ILE A 188 SHEET 5 A 5 VAL A 152 ARG A 156 -1 N VAL A 153 O PHE A 166 SHEET 1 B 4 VAL A 135 LEU A 141 0 SHEET 2 B 4 THR A 215 ALA A 221 -1 O ILE A 220 N GLU A 136 SHEET 3 B 4 GLN A 187 ILE A 191 -1 N LEU A 189 O VAL A 219 SHEET 4 B 4 GLN A 194 ALA A 195 -1 O GLN A 194 N ILE A 191 SHEET 1 C 4 VAL B 135 LEU B 141 0 SHEET 2 C 4 THR B 215 ALA B 221 -1 O VAL B 216 N LEU B 140 SHEET 3 C 4 GLN B 187 ILE B 191 -1 N GLN B 187 O ALA B 221 SHEET 4 C 4 GLN B 194 ALA B 195 -1 O GLN B 194 N ILE B 191 SHEET 1 D 2 VAL B 152 ARG B 156 0 SHEET 2 D 2 LEU B 163 VAL B 167 -1 O PHE B 166 N VAL B 153 CRYST1 100.366 32.660 92.803 90.00 110.68 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009964 0.000000 0.003761 0.00000 SCALE2 0.000000 0.030618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011518 0.00000 MASTER 386 0 0 8 15 0 0 6 1638 2 0 18 END