data_2O52 # _entry.id 2O52 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2O52 pdb_00002o52 10.2210/pdb2o52/pdb RCSB RCSB040696 ? ? WWPDB D_1000040696 ? ? # _pdbx_database_status.entry_id 2O52 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, H.' 1 'Tempel, W.' 2 'Wang, J.' 3 'Shen, Y.' 4 'Landry, R.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Sundstrom, M.' 8 'Weigelt, J.' 9 'Bochkarev, A.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Crystal structure of human RAB4B in complex with GDP' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, H.' 1 ? primary 'Tempel, W.' 2 ? primary 'Wang, J.' 3 ? primary 'Shen, Y.' 4 ? primary 'Landry, R.' 5 ? primary 'Arrowsmith, C.H.' 6 ? primary 'Edwards, A.M.' 7 ? primary 'Sundstrom, M.' 8 ? primary 'Weigelt, J.' 9 ? primary 'Bochkarev, A.' 10 ? primary 'Park, H.' 11 ? # _cell.length_a 67.528 _cell.length_b 67.528 _cell.length_c 179.955 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 2O52 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.Int_Tables_number 96 _symmetry.entry_id 2O52 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-4B' 22336.215 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 4 non-polymer syn BETA-MERCAPTOETHANOL 78.133 2 ? ? ? ? 5 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 6 water nat water 18.015 75 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSIWSDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQEN ELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSIWSDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQEN ELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 ILE n 1 21 TRP n 1 22 SER n 1 23 ASP n 1 24 PHE n 1 25 LEU n 1 26 PHE n 1 27 LYS n 1 28 PHE n 1 29 LEU n 1 30 VAL n 1 31 ILE n 1 32 GLY n 1 33 SER n 1 34 ALA n 1 35 GLY n 1 36 THR n 1 37 GLY n 1 38 LYS n 1 39 SER n 1 40 CYS n 1 41 LEU n 1 42 LEU n 1 43 HIS n 1 44 GLN n 1 45 PHE n 1 46 ILE n 1 47 GLU n 1 48 ASN n 1 49 LYS n 1 50 PHE n 1 51 LYS n 1 52 GLN n 1 53 ASP n 1 54 SER n 1 55 ASN n 1 56 HIS n 1 57 THR n 1 58 ILE n 1 59 GLY n 1 60 VAL n 1 61 GLU n 1 62 PHE n 1 63 GLY n 1 64 SER n 1 65 ARG n 1 66 VAL n 1 67 VAL n 1 68 ASN n 1 69 VAL n 1 70 GLY n 1 71 GLY n 1 72 LYS n 1 73 THR n 1 74 VAL n 1 75 LYS n 1 76 LEU n 1 77 GLN n 1 78 ILE n 1 79 TRP n 1 80 ASP n 1 81 THR n 1 82 ALA n 1 83 GLY n 1 84 GLN n 1 85 GLU n 1 86 ARG n 1 87 PHE n 1 88 ARG n 1 89 SER n 1 90 VAL n 1 91 THR n 1 92 ARG n 1 93 SER n 1 94 TYR n 1 95 TYR n 1 96 ARG n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 GLY n 1 101 ALA n 1 102 LEU n 1 103 LEU n 1 104 VAL n 1 105 TYR n 1 106 ASP n 1 107 ILE n 1 108 THR n 1 109 SER n 1 110 ARG n 1 111 GLU n 1 112 THR n 1 113 TYR n 1 114 ASN n 1 115 SER n 1 116 LEU n 1 117 ALA n 1 118 ALA n 1 119 TRP n 1 120 LEU n 1 121 THR n 1 122 ASP n 1 123 ALA n 1 124 ARG n 1 125 THR n 1 126 LEU n 1 127 ALA n 1 128 SER n 1 129 PRO n 1 130 ASN n 1 131 ILE n 1 132 VAL n 1 133 VAL n 1 134 ILE n 1 135 LEU n 1 136 CYS n 1 137 GLY n 1 138 ASN n 1 139 LYS n 1 140 LYS n 1 141 ASP n 1 142 LEU n 1 143 ASP n 1 144 PRO n 1 145 GLU n 1 146 ARG n 1 147 GLU n 1 148 VAL n 1 149 THR n 1 150 PHE n 1 151 LEU n 1 152 GLU n 1 153 ALA n 1 154 SER n 1 155 ARG n 1 156 PHE n 1 157 ALA n 1 158 GLN n 1 159 GLU n 1 160 ASN n 1 161 GLU n 1 162 LEU n 1 163 MET n 1 164 PHE n 1 165 LEU n 1 166 GLU n 1 167 THR n 1 168 SER n 1 169 ALA n 1 170 LEU n 1 171 THR n 1 172 GLY n 1 173 GLU n 1 174 ASN n 1 175 VAL n 1 176 GLU n 1 177 GLU n 1 178 ALA n 1 179 PHE n 1 180 LEU n 1 181 LYS n 1 182 CYS n 1 183 ALA n 1 184 ARG n 1 185 THR n 1 186 ILE n 1 187 LEU n 1 188 ASN n 1 189 LYS n 1 190 ILE n 1 191 ASP n 1 192 SER n 1 193 GLY n 1 194 GLU n 1 195 LEU n 1 196 ASP n 1 197 PRO n 1 198 GLU n 1 199 ARG n 1 200 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RAB4B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus (DE-3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-thrombin-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB4B_HUMAN _struct_ref.pdbx_db_accession P61018 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGAL LVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKC ARTILNKIDSGELDPERM ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2O52 A 23 ? 200 ? P61018 6 ? 183 ? 6 183 2 1 2O52 B 23 ? 200 ? P61018 6 ? 183 ? 6 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2O52 MET A 1 ? UNP P61018 ? ? 'cloning artifact' -16 1 1 2O52 GLY A 2 ? UNP P61018 ? ? 'cloning artifact' -15 2 1 2O52 SER A 3 ? UNP P61018 ? ? 'cloning artifact' -14 3 1 2O52 SER A 4 ? UNP P61018 ? ? 'cloning artifact' -13 4 1 2O52 HIS A 5 ? UNP P61018 ? ? 'expression tag' -12 5 1 2O52 HIS A 6 ? UNP P61018 ? ? 'expression tag' -11 6 1 2O52 HIS A 7 ? UNP P61018 ? ? 'expression tag' -10 7 1 2O52 HIS A 8 ? UNP P61018 ? ? 'expression tag' -9 8 1 2O52 HIS A 9 ? UNP P61018 ? ? 'expression tag' -8 9 1 2O52 HIS A 10 ? UNP P61018 ? ? 'expression tag' -7 10 1 2O52 SER A 11 ? UNP P61018 ? ? 'cloning artifact' -6 11 1 2O52 SER A 12 ? UNP P61018 ? ? 'cloning artifact' -5 12 1 2O52 GLY A 13 ? UNP P61018 ? ? 'cloning artifact' -4 13 1 2O52 LEU A 14 ? UNP P61018 ? ? 'cloning artifact' -3 14 1 2O52 VAL A 15 ? UNP P61018 ? ? 'cloning artifact' -2 15 1 2O52 PRO A 16 ? UNP P61018 ? ? 'cloning artifact' -1 16 1 2O52 ARG A 17 ? UNP P61018 ? ? 'cloning artifact' 0 17 1 2O52 GLY A 18 ? UNP P61018 ? ? 'cloning artifact' 1 18 1 2O52 SER A 19 ? UNP P61018 ? ? 'cloning artifact' 2 19 1 2O52 ILE A 20 ? UNP P61018 ? ? 'SEE REMARK 999' 3 20 1 2O52 TRP A 21 ? UNP P61018 ? ? 'SEE REMARK 999' 4 21 1 2O52 SER A 22 ? UNP P61018 ? ? 'SEE REMARK 999' 5 22 2 2O52 MET B 1 ? UNP P61018 ? ? 'cloning artifact' -16 23 2 2O52 GLY B 2 ? UNP P61018 ? ? 'cloning artifact' -15 24 2 2O52 SER B 3 ? UNP P61018 ? ? 'cloning artifact' -14 25 2 2O52 SER B 4 ? UNP P61018 ? ? 'cloning artifact' -13 26 2 2O52 HIS B 5 ? UNP P61018 ? ? 'expression tag' -12 27 2 2O52 HIS B 6 ? UNP P61018 ? ? 'expression tag' -11 28 2 2O52 HIS B 7 ? UNP P61018 ? ? 'expression tag' -10 29 2 2O52 HIS B 8 ? UNP P61018 ? ? 'expression tag' -9 30 2 2O52 HIS B 9 ? UNP P61018 ? ? 'expression tag' -8 31 2 2O52 HIS B 10 ? UNP P61018 ? ? 'expression tag' -7 32 2 2O52 SER B 11 ? UNP P61018 ? ? 'cloning artifact' -6 33 2 2O52 SER B 12 ? UNP P61018 ? ? 'cloning artifact' -5 34 2 2O52 GLY B 13 ? UNP P61018 ? ? 'cloning artifact' -4 35 2 2O52 LEU B 14 ? UNP P61018 ? ? 'cloning artifact' -3 36 2 2O52 VAL B 15 ? UNP P61018 ? ? 'cloning artifact' -2 37 2 2O52 PRO B 16 ? UNP P61018 ? ? 'cloning artifact' -1 38 2 2O52 ARG B 17 ? UNP P61018 ? ? 'cloning artifact' 0 39 2 2O52 GLY B 18 ? UNP P61018 ? ? 'cloning artifact' 1 40 2 2O52 SER B 19 ? UNP P61018 ? ? 'cloning artifact' 2 41 2 2O52 ILE B 20 ? UNP P61018 ? ? 'SEE REMARK 999' 3 42 2 2O52 TRP B 21 ? UNP P61018 ? ? 'SEE REMARK 999' 4 43 2 2O52 SER B 22 ? UNP P61018 ? ? 'SEE REMARK 999' 5 44 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2O52 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 46.42 _exptl_crystal.density_Matthews 2.295 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '18% PEG8000, 0.2M magnesium acetate, 0.1M sodium cacodylate, pH 6.5, vapor diffusion, sitting drop, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 2006-10-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2O52 _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 30.000 _reflns.number_obs 40474 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_netI_over_sigmaI 9.000 _reflns.pdbx_chi_squared 1.936 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.20 2.28 ? ? 4044 0.976 ? ? 1.498 6.00 100.00 ? ? ? 1 2.28 2.37 ? ? 4047 0.909 ? ? 1.555 6.00 100.00 ? ? ? 2 2.37 2.48 ? ? 4042 0.72 ? ? 1.588 6.00 100.00 ? ? ? 3 2.48 2.61 ? ? 4061 0.521 ? ? 1.636 6.10 100.00 ? ? ? 4 2.61 2.77 ? ? 4022 0.431 ? ? 1.730 6.10 100.00 ? ? ? 5 2.77 2.99 ? ? 4040 0.269 ? ? 1.827 6.20 100.00 ? ? ? 6 2.99 3.29 ? ? 4056 0.161 ? ? 2.100 6.20 100.00 ? ? ? 7 3.29 3.76 ? ? 4047 0.096 ? ? 2.296 6.30 100.00 ? ? ? 8 3.76 4.73 ? ? 4042 0.062 ? ? 2.597 6.40 100.00 ? ? ? 9 4.73 30.00 ? ? 4073 0.048 ? ? 2.406 6.60 100.00 ? ? ? 10 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.B_iso_mean 33.089 _refine.aniso_B[1][1] 1.466 _refine.aniso_B[2][2] 1.466 _refine.aniso_B[3][3] -2.932 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 20.000 _refine.ls_number_reflns_R_free 1033 _refine.ls_number_reflns_obs 21799 _refine.ls_R_factor_R_work 0.2135 _refine.ls_R_factor_R_free 0.2693 _refine.ls_R_factor_all 0.216 _refine.ls_wR_factor_R_work 0.187 _refine.ls_wR_factor_R_free 0.237 _refine.ls_percent_reflns_obs 99.177 _refine.ls_percent_reflns_R_free 4.739 _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.920 _refine.pdbx_overall_ESU_R 0.247 _refine.pdbx_overall_ESU_R_Free 0.217 _refine.overall_SU_ML 0.148 _refine.overall_SU_B 5.688 _refine.entry_id 2O52 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 2bme' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details 'thin shells' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2538 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 75 _refine_hist.number_atoms_total 2676 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2651 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1762 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3593 1.409 1.983 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4280 0.907 3.001 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 331 6.431 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 114 39.851 23.860 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 445 15.358 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17 19.032 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 415 0.079 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2917 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 564 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 503 0.198 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1738 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1277 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1364 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 104 0.147 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 16 0.117 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 34 0.299 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 9 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1677 2.456 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 671 0.653 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2597 3.663 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1143 2.394 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 991 3.256 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 2.256 2.200 1597 99.687 1592 0.239 0.239 0 . . . . . 'X-RAY DIFFRACTION' 20 2.317 2.256 1526 99.541 1301 0.246 0.259 218 0.344 . . . . 'X-RAY DIFFRACTION' 20 2.384 2.317 1473 99.389 1464 0.245 0.245 0 . . . . . 'X-RAY DIFFRACTION' 20 2.456 2.384 1456 99.657 1451 0.243 0.243 0 . . . . . 'X-RAY DIFFRACTION' 20 2.535 2.456 1405 99.359 1215 0.223 0.229 181 0.264 . . . . 'X-RAY DIFFRACTION' 20 2.623 2.535 1367 99.634 1362 0.227 0.227 0 . . . . . 'X-RAY DIFFRACTION' 20 2.720 2.623 1331 98.723 1158 0.243 0.254 156 0.339 . . . . 'X-RAY DIFFRACTION' 20 2.829 2.720 1285 98.755 1269 0.236 0.236 0 . . . . . 'X-RAY DIFFRACTION' 20 2.952 2.829 1223 99.101 1212 0.23 0.230 0 . . . . . 'X-RAY DIFFRACTION' 20 3.093 2.952 1192 98.490 1057 0.224 0.231 117 0.294 . . . . 'X-RAY DIFFRACTION' 20 3.256 3.093 1114 99.013 1103 0.226 0.226 0 . . . . . 'X-RAY DIFFRACTION' 20 3.447 3.256 1079 98.981 972 0.203 0.209 96 0.275 . . . . 'X-RAY DIFFRACTION' 20 3.678 3.447 1015 98.621 1001 0.211 0.211 0 . . . . . 'X-RAY DIFFRACTION' 20 3.961 3.678 950 99.053 865 0.192 0.198 76 0.266 . . . . 'X-RAY DIFFRACTION' 20 4.322 3.961 888 97.748 800 0.192 0.195 68 0.229 . . . . 'X-RAY DIFFRACTION' 20 4.804 4.322 819 98.657 808 0.168 0.168 0 . . . . . 'X-RAY DIFFRACTION' 20 5.495 4.804 727 99.725 680 0.191 0.191 45 0.19 . . . . 'X-RAY DIFFRACTION' 20 6.607 5.495 640 100.000 608 0.245 0.248 32 0.296 . . . . 'X-RAY DIFFRACTION' 20 8.872 6.607 526 99.810 504 0.211 0.214 21 0.284 . . . . 'X-RAY DIFFRACTION' 20 20.000 8.872 367 100.000 344 0.221 0.222 23 0.229 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2O52 _struct.title 'Crystal structure of human RAB4B in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'G-PROTEIN, RAB, GDP, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, PROTEIN TRANSPORT' _struct_keywords.entry_id 2O52 _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 6 ? K N N 6 ? # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 'not known' ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 37 ? GLU A 47 ? GLY A 20 GLU A 30 1 ? 11 HELX_P HELX_P2 2 GLY A 83 ? ARG A 88 ? GLY A 66 ARG A 71 1 ? 6 HELX_P HELX_P3 3 THR A 91 ? ARG A 96 ? THR A 74 ARG A 79 1 ? 6 HELX_P HELX_P4 4 SER A 109 ? SER A 115 ? SER A 92 SER A 98 1 ? 7 HELX_P HELX_P5 5 SER A 115 ? ALA A 127 ? SER A 98 ALA A 110 1 ? 13 HELX_P HELX_P6 6 LYS A 140 ? ARG A 146 ? LYS A 123 ARG A 129 5 ? 7 HELX_P HELX_P7 7 THR A 149 ? ASN A 160 ? THR A 132 ASN A 143 1 ? 12 HELX_P HELX_P8 8 ASN A 174 ? SER A 192 ? ASN A 157 SER A 175 1 ? 19 HELX_P HELX_P9 9 ASP A 196 ? MET A 200 ? ASP A 179 MET A 183 5 ? 5 HELX_P HELX_P10 10 GLY B 37 ? GLU B 47 ? GLY B 20 GLU B 30 1 ? 11 HELX_P HELX_P11 11 GLY B 83 ? PHE B 87 ? GLY B 66 PHE B 70 5 ? 5 HELX_P HELX_P12 12 THR B 91 ? ARG B 96 ? THR B 74 ARG B 79 1 ? 6 HELX_P HELX_P13 13 SER B 109 ? SER B 115 ? SER B 92 SER B 98 1 ? 7 HELX_P HELX_P14 14 SER B 115 ? ALA B 127 ? SER B 98 ALA B 110 1 ? 13 HELX_P HELX_P15 15 LYS B 139 ? ARG B 146 ? LYS B 122 ARG B 129 5 ? 8 HELX_P HELX_P16 16 THR B 149 ? ASN B 160 ? THR B 132 ASN B 143 1 ? 12 HELX_P HELX_P17 17 ASN B 174 ? ILE B 190 ? ASN B 157 ILE B 173 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 39 OG ? ? ? 1_555 C MG . MG ? ? A SER 22 A MG 602 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc2 metalc ? ? D GDP . O2B ? ? ? 1_555 C MG . MG ? ? A GDP 601 A MG 602 1_555 ? ? ? ? ? ? ? 2.162 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 602 A HOH 1004 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 602 A HOH 1005 1_555 ? ? ? ? ? ? ? 2.023 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 602 A HOH 1006 1_555 ? ? ? ? ? ? ? 2.153 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 602 A HOH 1007 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc7 metalc ? ? B SER 39 OG ? ? ? 1_555 G MG . MG ? ? B SER 22 B MG 602 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc8 metalc ? ? H GDP . O2B ? ? ? 1_555 G MG . MG ? ? B GDP 601 B MG 602 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc9 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 602 B HOH 604 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc10 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 602 B HOH 605 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc11 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 602 B HOH 606 1_555 ? ? ? ? ? ? ? 2.222 ? ? metalc12 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 602 B HOH 607 1_555 ? ? ? ? ? ? ? 2.247 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 62 ? VAL A 69 ? PHE A 45 VAL A 52 A 2 LYS A 72 ? TRP A 79 ? LYS A 55 TRP A 62 A 3 PHE A 24 ? GLY A 32 ? PHE A 7 GLY A 15 A 4 GLY A 100 ? ASP A 106 ? GLY A 83 ASP A 89 A 5 VAL A 132 ? ASN A 138 ? VAL A 115 ASN A 121 A 6 MET A 163 ? THR A 167 ? MET A 146 THR A 150 B 1 PHE B 62 ? VAL B 69 ? PHE B 45 VAL B 52 B 2 LYS B 72 ? TRP B 79 ? LYS B 55 TRP B 62 B 3 PHE B 24 ? ILE B 31 ? PHE B 7 ILE B 14 B 4 GLY B 100 ? ASP B 106 ? GLY B 83 ASP B 89 B 5 VAL B 132 ? ASN B 138 ? VAL B 115 ASN B 121 B 6 MET B 163 ? GLU B 166 ? MET B 146 GLU B 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 63 ? N GLY A 46 O ILE A 78 ? O ILE A 61 A 2 3 O LYS A 75 ? O LYS A 58 N PHE A 24 ? N PHE A 7 A 3 4 N ILE A 31 ? N ILE A 14 O VAL A 104 ? O VAL A 87 A 4 5 N TYR A 105 ? N TYR A 88 O ASN A 138 ? O ASN A 121 A 5 6 N LEU A 135 ? N LEU A 118 O MET A 163 ? O MET A 146 B 1 2 N GLY B 63 ? N GLY B 46 O ILE B 78 ? O ILE B 61 B 2 3 O LYS B 75 ? O LYS B 58 N PHE B 26 ? N PHE B 9 B 3 4 N ILE B 31 ? N ILE B 14 O VAL B 104 ? O VAL B 87 B 4 5 N LEU B 103 ? N LEU B 86 O ILE B 134 ? O ILE B 117 B 5 6 N LEU B 135 ? N LEU B 118 O MET B 163 ? O MET B 146 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 602 ? 6 'BINDING SITE FOR RESIDUE MG A 602' AC2 Software B MG 602 ? 6 'BINDING SITE FOR RESIDUE MG B 602' AC3 Software A GDP 601 ? 18 'BINDING SITE FOR RESIDUE GDP A 601' AC4 Software A BME 603 ? 2 'BINDING SITE FOR RESIDUE BME A 603' AC5 Software B GDP 601 ? 22 'BINDING SITE FOR RESIDUE GDP B 601' AC6 Software B BME 603 ? 2 'BINDING SITE FOR RESIDUE BME B 603' AC7 Software A UNX 1003 ? 2 'BINDING SITE FOR RESIDUE UNX A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 39 ? SER A 22 . ? 1_555 ? 2 AC1 6 GDP D . ? GDP A 601 . ? 1_555 ? 3 AC1 6 HOH J . ? HOH A 1004 . ? 1_555 ? 4 AC1 6 HOH J . ? HOH A 1005 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 1006 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 1007 . ? 1_555 ? 7 AC2 6 SER B 39 ? SER B 22 . ? 1_555 ? 8 AC2 6 GDP H . ? GDP B 601 . ? 1_555 ? 9 AC2 6 HOH K . ? HOH B 604 . ? 1_555 ? 10 AC2 6 HOH K . ? HOH B 605 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH B 606 . ? 1_555 ? 12 AC2 6 HOH K . ? HOH B 607 . ? 1_555 ? 13 AC3 18 SER A 33 ? SER A 16 . ? 1_555 ? 14 AC3 18 GLY A 35 ? GLY A 18 . ? 1_555 ? 15 AC3 18 THR A 36 ? THR A 19 . ? 1_555 ? 16 AC3 18 GLY A 37 ? GLY A 20 . ? 1_555 ? 17 AC3 18 LYS A 38 ? LYS A 21 . ? 1_555 ? 18 AC3 18 SER A 39 ? SER A 22 . ? 1_555 ? 19 AC3 18 CYS A 40 ? CYS A 23 . ? 1_555 ? 20 AC3 18 ASN A 138 ? ASN A 121 . ? 1_555 ? 21 AC3 18 LYS A 139 ? LYS A 122 . ? 1_555 ? 22 AC3 18 ASP A 141 ? ASP A 124 . ? 1_555 ? 23 AC3 18 LEU A 142 ? LEU A 125 . ? 1_555 ? 24 AC3 18 SER A 168 ? SER A 151 . ? 1_555 ? 25 AC3 18 ALA A 169 ? ALA A 152 . ? 1_555 ? 26 AC3 18 LEU A 170 ? LEU A 153 . ? 1_555 ? 27 AC3 18 MG C . ? MG A 602 . ? 1_555 ? 28 AC3 18 HOH J . ? HOH A 1005 . ? 1_555 ? 29 AC3 18 HOH J . ? HOH A 1006 . ? 1_555 ? 30 AC3 18 HOH J . ? HOH A 1007 . ? 1_555 ? 31 AC4 2 CYS A 40 ? CYS A 23 . ? 1_555 ? 32 AC4 2 LEU A 170 ? LEU A 153 . ? 1_555 ? 33 AC5 22 GLY A 70 ? GLY A 53 . ? 7_655 ? 34 AC5 22 GLY A 71 ? GLY A 54 . ? 7_655 ? 35 AC5 22 LYS A 72 ? LYS A 55 . ? 7_655 ? 36 AC5 22 SER B 33 ? SER B 16 . ? 1_555 ? 37 AC5 22 GLY B 35 ? GLY B 18 . ? 1_555 ? 38 AC5 22 THR B 36 ? THR B 19 . ? 1_555 ? 39 AC5 22 GLY B 37 ? GLY B 20 . ? 1_555 ? 40 AC5 22 LYS B 38 ? LYS B 21 . ? 1_555 ? 41 AC5 22 SER B 39 ? SER B 22 . ? 1_555 ? 42 AC5 22 CYS B 40 ? CYS B 23 . ? 1_555 ? 43 AC5 22 ARG B 86 ? ARG B 69 . ? 1_555 ? 44 AC5 22 ASN B 138 ? ASN B 121 . ? 1_555 ? 45 AC5 22 LYS B 139 ? LYS B 122 . ? 1_555 ? 46 AC5 22 ASP B 141 ? ASP B 124 . ? 1_555 ? 47 AC5 22 LEU B 142 ? LEU B 125 . ? 1_555 ? 48 AC5 22 SER B 168 ? SER B 151 . ? 1_555 ? 49 AC5 22 ALA B 169 ? ALA B 152 . ? 1_555 ? 50 AC5 22 LEU B 170 ? LEU B 153 . ? 1_555 ? 51 AC5 22 MG G . ? MG B 602 . ? 1_555 ? 52 AC5 22 BME I . ? BME B 603 . ? 1_555 ? 53 AC5 22 HOH K . ? HOH B 604 . ? 1_555 ? 54 AC5 22 HOH K . ? HOH B 606 . ? 1_555 ? 55 AC6 2 CYS B 40 ? CYS B 23 . ? 1_555 ? 56 AC6 2 GDP H . ? GDP B 601 . ? 1_555 ? 57 AC7 2 HOH J . ? HOH A 1023 . ? 1_555 ? 58 AC7 2 ASN B 174 ? ASN B 157 . ? 6_445 ? # _atom_sites.entry_id 2O52 _atom_sites.fract_transf_matrix[1][1] 0.01481 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01481 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00556 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -16 ? ? ? A . n A 1 2 GLY 2 -15 ? ? ? A . n A 1 3 SER 3 -14 ? ? ? A . n A 1 4 SER 4 -13 ? ? ? A . n A 1 5 HIS 5 -12 ? ? ? A . n A 1 6 HIS 6 -11 ? ? ? A . n A 1 7 HIS 7 -10 ? ? ? A . n A 1 8 HIS 8 -9 ? ? ? A . n A 1 9 HIS 9 -8 ? ? ? A . n A 1 10 HIS 10 -7 ? ? ? A . n A 1 11 SER 11 -6 ? ? ? A . n A 1 12 SER 12 -5 ? ? ? A . n A 1 13 GLY 13 -4 ? ? ? A . n A 1 14 LEU 14 -3 ? ? ? A . n A 1 15 VAL 15 -2 ? ? ? A . n A 1 16 PRO 16 -1 ? ? ? A . n A 1 17 ARG 17 0 ? ? ? A . n A 1 18 GLY 18 1 ? ? ? A . n A 1 19 SER 19 2 ? ? ? A . n A 1 20 ILE 20 3 ? ? ? A . n A 1 21 TRP 21 4 ? ? ? A . n A 1 22 SER 22 5 5 SER SER A . n A 1 23 ASP 23 6 6 ASP ASP A . n A 1 24 PHE 24 7 7 PHE PHE A . n A 1 25 LEU 25 8 8 LEU LEU A . n A 1 26 PHE 26 9 9 PHE PHE A . n A 1 27 LYS 27 10 10 LYS LYS A . n A 1 28 PHE 28 11 11 PHE PHE A . n A 1 29 LEU 29 12 12 LEU LEU A . n A 1 30 VAL 30 13 13 VAL VAL A . n A 1 31 ILE 31 14 14 ILE ILE A . n A 1 32 GLY 32 15 15 GLY GLY A . n A 1 33 SER 33 16 16 SER SER A . n A 1 34 ALA 34 17 17 ALA ALA A . n A 1 35 GLY 35 18 18 GLY GLY A . n A 1 36 THR 36 19 19 THR THR A . n A 1 37 GLY 37 20 20 GLY GLY A . n A 1 38 LYS 38 21 21 LYS LYS A . n A 1 39 SER 39 22 22 SER SER A . n A 1 40 CYS 40 23 23 CYS CYS A . n A 1 41 LEU 41 24 24 LEU LEU A . n A 1 42 LEU 42 25 25 LEU LEU A . n A 1 43 HIS 43 26 26 HIS HIS A . n A 1 44 GLN 44 27 27 GLN GLN A . n A 1 45 PHE 45 28 28 PHE PHE A . n A 1 46 ILE 46 29 29 ILE ILE A . n A 1 47 GLU 47 30 30 GLU GLU A . n A 1 48 ASN 48 31 ? ? ? A . n A 1 49 LYS 49 32 ? ? ? A . n A 1 50 PHE 50 33 ? ? ? A . n A 1 51 LYS 51 34 ? ? ? A . n A 1 52 GLN 52 35 ? ? ? A . n A 1 53 ASP 53 36 ? ? ? A . n A 1 54 SER 54 37 ? ? ? A . n A 1 55 ASN 55 38 ? ? ? A . n A 1 56 HIS 56 39 ? ? ? A . n A 1 57 THR 57 40 ? ? ? A . n A 1 58 ILE 58 41 ? ? ? A . n A 1 59 GLY 59 42 ? ? ? A . n A 1 60 VAL 60 43 43 VAL VAL A . n A 1 61 GLU 61 44 44 GLU GLU A . n A 1 62 PHE 62 45 45 PHE PHE A . n A 1 63 GLY 63 46 46 GLY GLY A . n A 1 64 SER 64 47 47 SER SER A . n A 1 65 ARG 65 48 48 ARG ARG A . n A 1 66 VAL 66 49 49 VAL VAL A . n A 1 67 VAL 67 50 50 VAL VAL A . n A 1 68 ASN 68 51 51 ASN ASN A . n A 1 69 VAL 69 52 52 VAL VAL A . n A 1 70 GLY 70 53 53 GLY GLY A . n A 1 71 GLY 71 54 54 GLY GLY A . n A 1 72 LYS 72 55 55 LYS LYS A . n A 1 73 THR 73 56 56 THR THR A . n A 1 74 VAL 74 57 57 VAL VAL A . n A 1 75 LYS 75 58 58 LYS LYS A . n A 1 76 LEU 76 59 59 LEU LEU A . n A 1 77 GLN 77 60 60 GLN GLN A . n A 1 78 ILE 78 61 61 ILE ILE A . n A 1 79 TRP 79 62 62 TRP TRP A . n A 1 80 ASP 80 63 63 ASP ASP A . n A 1 81 THR 81 64 64 THR THR A . n A 1 82 ALA 82 65 65 ALA ALA A . n A 1 83 GLY 83 66 66 GLY GLY A . n A 1 84 GLN 84 67 67 GLN GLN A . n A 1 85 GLU 85 68 68 GLU GLU A . n A 1 86 ARG 86 69 69 ARG ARG A . n A 1 87 PHE 87 70 70 PHE PHE A . n A 1 88 ARG 88 71 71 ARG ARG A . n A 1 89 SER 89 72 72 SER SER A . n A 1 90 VAL 90 73 73 VAL VAL A . n A 1 91 THR 91 74 74 THR THR A . n A 1 92 ARG 92 75 75 ARG ARG A . n A 1 93 SER 93 76 76 SER SER A . n A 1 94 TYR 94 77 77 TYR TYR A . n A 1 95 TYR 95 78 78 TYR TYR A . n A 1 96 ARG 96 79 79 ARG ARG A . n A 1 97 GLY 97 80 80 GLY GLY A . n A 1 98 ALA 98 81 81 ALA ALA A . n A 1 99 ALA 99 82 82 ALA ALA A . n A 1 100 GLY 100 83 83 GLY GLY A . n A 1 101 ALA 101 84 84 ALA ALA A . n A 1 102 LEU 102 85 85 LEU LEU A . n A 1 103 LEU 103 86 86 LEU LEU A . n A 1 104 VAL 104 87 87 VAL VAL A . n A 1 105 TYR 105 88 88 TYR TYR A . n A 1 106 ASP 106 89 89 ASP ASP A . n A 1 107 ILE 107 90 90 ILE ILE A . n A 1 108 THR 108 91 91 THR THR A . n A 1 109 SER 109 92 92 SER SER A . n A 1 110 ARG 110 93 93 ARG ARG A . n A 1 111 GLU 111 94 94 GLU GLU A . n A 1 112 THR 112 95 95 THR THR A . n A 1 113 TYR 113 96 96 TYR TYR A . n A 1 114 ASN 114 97 97 ASN ASN A . n A 1 115 SER 115 98 98 SER SER A . n A 1 116 LEU 116 99 99 LEU LEU A . n A 1 117 ALA 117 100 100 ALA ALA A . n A 1 118 ALA 118 101 101 ALA ALA A . n A 1 119 TRP 119 102 102 TRP TRP A . n A 1 120 LEU 120 103 103 LEU LEU A . n A 1 121 THR 121 104 104 THR THR A . n A 1 122 ASP 122 105 105 ASP ASP A . n A 1 123 ALA 123 106 106 ALA ALA A . n A 1 124 ARG 124 107 107 ARG ARG A . n A 1 125 THR 125 108 108 THR THR A . n A 1 126 LEU 126 109 109 LEU LEU A . n A 1 127 ALA 127 110 110 ALA ALA A . n A 1 128 SER 128 111 111 SER SER A . n A 1 129 PRO 129 112 112 PRO PRO A . n A 1 130 ASN 130 113 113 ASN ASN A . n A 1 131 ILE 131 114 114 ILE ILE A . n A 1 132 VAL 132 115 115 VAL VAL A . n A 1 133 VAL 133 116 116 VAL VAL A . n A 1 134 ILE 134 117 117 ILE ILE A . n A 1 135 LEU 135 118 118 LEU LEU A . n A 1 136 CYS 136 119 119 CYS CYS A . n A 1 137 GLY 137 120 120 GLY GLY A . n A 1 138 ASN 138 121 121 ASN ASN A . n A 1 139 LYS 139 122 122 LYS LYS A . n A 1 140 LYS 140 123 123 LYS LYS A . n A 1 141 ASP 141 124 124 ASP ASP A . n A 1 142 LEU 142 125 125 LEU LEU A . n A 1 143 ASP 143 126 126 ASP ASP A . n A 1 144 PRO 144 127 127 PRO PRO A . n A 1 145 GLU 145 128 128 GLU GLU A . n A 1 146 ARG 146 129 129 ARG ARG A . n A 1 147 GLU 147 130 130 GLU GLU A . n A 1 148 VAL 148 131 131 VAL VAL A . n A 1 149 THR 149 132 132 THR THR A . n A 1 150 PHE 150 133 133 PHE PHE A . n A 1 151 LEU 151 134 134 LEU LEU A . n A 1 152 GLU 152 135 135 GLU GLU A . n A 1 153 ALA 153 136 136 ALA ALA A . n A 1 154 SER 154 137 137 SER SER A . n A 1 155 ARG 155 138 138 ARG ARG A . n A 1 156 PHE 156 139 139 PHE PHE A . n A 1 157 ALA 157 140 140 ALA ALA A . n A 1 158 GLN 158 141 141 GLN GLN A . n A 1 159 GLU 159 142 142 GLU GLU A . n A 1 160 ASN 160 143 143 ASN ASN A . n A 1 161 GLU 161 144 144 GLU GLU A . n A 1 162 LEU 162 145 145 LEU LEU A . n A 1 163 MET 163 146 146 MET MET A . n A 1 164 PHE 164 147 147 PHE PHE A . n A 1 165 LEU 165 148 148 LEU LEU A . n A 1 166 GLU 166 149 149 GLU GLU A . n A 1 167 THR 167 150 150 THR THR A . n A 1 168 SER 168 151 151 SER SER A . n A 1 169 ALA 169 152 152 ALA ALA A . n A 1 170 LEU 170 153 153 LEU LEU A . n A 1 171 THR 171 154 154 THR THR A . n A 1 172 GLY 172 155 155 GLY GLY A . n A 1 173 GLU 173 156 156 GLU GLU A . n A 1 174 ASN 174 157 157 ASN ASN A . n A 1 175 VAL 175 158 158 VAL VAL A . n A 1 176 GLU 176 159 159 GLU GLU A . n A 1 177 GLU 177 160 160 GLU GLU A . n A 1 178 ALA 178 161 161 ALA ALA A . n A 1 179 PHE 179 162 162 PHE PHE A . n A 1 180 LEU 180 163 163 LEU LEU A . n A 1 181 LYS 181 164 164 LYS LYS A . n A 1 182 CYS 182 165 165 CYS CYS A . n A 1 183 ALA 183 166 166 ALA ALA A . n A 1 184 ARG 184 167 167 ARG ARG A . n A 1 185 THR 185 168 168 THR THR A . n A 1 186 ILE 186 169 169 ILE ILE A . n A 1 187 LEU 187 170 170 LEU LEU A . n A 1 188 ASN 188 171 171 ASN ASN A . n A 1 189 LYS 189 172 172 LYS LYS A . n A 1 190 ILE 190 173 173 ILE ILE A . n A 1 191 ASP 191 174 174 ASP ASP A . n A 1 192 SER 192 175 175 SER SER A . n A 1 193 GLY 193 176 176 GLY GLY A . n A 1 194 GLU 194 177 177 GLU GLU A . n A 1 195 LEU 195 178 178 LEU LEU A . n A 1 196 ASP 196 179 179 ASP ASP A . n A 1 197 PRO 197 180 180 PRO PRO A . n A 1 198 GLU 198 181 181 GLU GLU A . n A 1 199 ARG 199 182 182 ARG ARG A . n A 1 200 MET 200 183 183 MET MET A . n B 1 1 MET 1 -16 ? ? ? B . n B 1 2 GLY 2 -15 ? ? ? B . n B 1 3 SER 3 -14 ? ? ? B . n B 1 4 SER 4 -13 ? ? ? B . n B 1 5 HIS 5 -12 ? ? ? B . n B 1 6 HIS 6 -11 ? ? ? B . n B 1 7 HIS 7 -10 ? ? ? B . n B 1 8 HIS 8 -9 ? ? ? B . n B 1 9 HIS 9 -8 ? ? ? B . n B 1 10 HIS 10 -7 ? ? ? B . n B 1 11 SER 11 -6 ? ? ? B . n B 1 12 SER 12 -5 ? ? ? B . n B 1 13 GLY 13 -4 ? ? ? B . n B 1 14 LEU 14 -3 ? ? ? B . n B 1 15 VAL 15 -2 ? ? ? B . n B 1 16 PRO 16 -1 ? ? ? B . n B 1 17 ARG 17 0 ? ? ? B . n B 1 18 GLY 18 1 ? ? ? B . n B 1 19 SER 19 2 ? ? ? B . n B 1 20 ILE 20 3 ? ? ? B . n B 1 21 TRP 21 4 ? ? ? B . n B 1 22 SER 22 5 5 SER SER B . n B 1 23 ASP 23 6 6 ASP ASP B . n B 1 24 PHE 24 7 7 PHE PHE B . n B 1 25 LEU 25 8 8 LEU LEU B . n B 1 26 PHE 26 9 9 PHE PHE B . n B 1 27 LYS 27 10 10 LYS LYS B . n B 1 28 PHE 28 11 11 PHE PHE B . n B 1 29 LEU 29 12 12 LEU LEU B . n B 1 30 VAL 30 13 13 VAL VAL B . n B 1 31 ILE 31 14 14 ILE ILE B . n B 1 32 GLY 32 15 15 GLY GLY B . n B 1 33 SER 33 16 16 SER SER B . n B 1 34 ALA 34 17 17 ALA ALA B . n B 1 35 GLY 35 18 18 GLY GLY B . n B 1 36 THR 36 19 19 THR THR B . n B 1 37 GLY 37 20 20 GLY GLY B . n B 1 38 LYS 38 21 21 LYS LYS B . n B 1 39 SER 39 22 22 SER SER B . n B 1 40 CYS 40 23 23 CYS CYS B . n B 1 41 LEU 41 24 24 LEU LEU B . n B 1 42 LEU 42 25 25 LEU LEU B . n B 1 43 HIS 43 26 26 HIS HIS B . n B 1 44 GLN 44 27 27 GLN GLN B . n B 1 45 PHE 45 28 28 PHE PHE B . n B 1 46 ILE 46 29 29 ILE ILE B . n B 1 47 GLU 47 30 30 GLU GLU B . n B 1 48 ASN 48 31 ? ? ? B . n B 1 49 LYS 49 32 ? ? ? B . n B 1 50 PHE 50 33 ? ? ? B . n B 1 51 LYS 51 34 ? ? ? B . n B 1 52 GLN 52 35 ? ? ? B . n B 1 53 ASP 53 36 ? ? ? B . n B 1 54 SER 54 37 ? ? ? B . n B 1 55 ASN 55 38 ? ? ? B . n B 1 56 HIS 56 39 ? ? ? B . n B 1 57 THR 57 40 ? ? ? B . n B 1 58 ILE 58 41 ? ? ? B . n B 1 59 GLY 59 42 ? ? ? B . n B 1 60 VAL 60 43 43 VAL VAL B . n B 1 61 GLU 61 44 44 GLU GLU B . n B 1 62 PHE 62 45 45 PHE PHE B . n B 1 63 GLY 63 46 46 GLY GLY B . n B 1 64 SER 64 47 47 SER SER B . n B 1 65 ARG 65 48 48 ARG ARG B . n B 1 66 VAL 66 49 49 VAL VAL B . n B 1 67 VAL 67 50 50 VAL VAL B . n B 1 68 ASN 68 51 51 ASN ASN B . n B 1 69 VAL 69 52 52 VAL VAL B . n B 1 70 GLY 70 53 53 GLY GLY B . n B 1 71 GLY 71 54 54 GLY GLY B . n B 1 72 LYS 72 55 55 LYS LYS B . n B 1 73 THR 73 56 56 THR THR B . n B 1 74 VAL 74 57 57 VAL VAL B . n B 1 75 LYS 75 58 58 LYS LYS B . n B 1 76 LEU 76 59 59 LEU LEU B . n B 1 77 GLN 77 60 60 GLN GLN B . n B 1 78 ILE 78 61 61 ILE ILE B . n B 1 79 TRP 79 62 62 TRP TRP B . n B 1 80 ASP 80 63 63 ASP ASP B . n B 1 81 THR 81 64 64 THR THR B . n B 1 82 ALA 82 65 65 ALA ALA B . n B 1 83 GLY 83 66 66 GLY GLY B . n B 1 84 GLN 84 67 67 GLN GLN B . n B 1 85 GLU 85 68 68 GLU GLU B . n B 1 86 ARG 86 69 69 ARG ARG B . n B 1 87 PHE 87 70 70 PHE PHE B . n B 1 88 ARG 88 71 71 ARG ARG B . n B 1 89 SER 89 72 72 SER SER B . n B 1 90 VAL 90 73 73 VAL VAL B . n B 1 91 THR 91 74 74 THR THR B . n B 1 92 ARG 92 75 75 ARG ARG B . n B 1 93 SER 93 76 76 SER SER B . n B 1 94 TYR 94 77 77 TYR TYR B . n B 1 95 TYR 95 78 78 TYR TYR B . n B 1 96 ARG 96 79 79 ARG ARG B . n B 1 97 GLY 97 80 80 GLY GLY B . n B 1 98 ALA 98 81 81 ALA ALA B . n B 1 99 ALA 99 82 82 ALA ALA B . n B 1 100 GLY 100 83 83 GLY GLY B . n B 1 101 ALA 101 84 84 ALA ALA B . n B 1 102 LEU 102 85 85 LEU LEU B . n B 1 103 LEU 103 86 86 LEU LEU B . n B 1 104 VAL 104 87 87 VAL VAL B . n B 1 105 TYR 105 88 88 TYR TYR B . n B 1 106 ASP 106 89 89 ASP ASP B . n B 1 107 ILE 107 90 90 ILE ILE B . n B 1 108 THR 108 91 91 THR THR B . n B 1 109 SER 109 92 92 SER SER B . n B 1 110 ARG 110 93 93 ARG ARG B . n B 1 111 GLU 111 94 94 GLU GLU B . n B 1 112 THR 112 95 95 THR THR B . n B 1 113 TYR 113 96 96 TYR TYR B . n B 1 114 ASN 114 97 97 ASN ASN B . n B 1 115 SER 115 98 98 SER SER B . n B 1 116 LEU 116 99 99 LEU LEU B . n B 1 117 ALA 117 100 100 ALA ALA B . n B 1 118 ALA 118 101 101 ALA ALA B . n B 1 119 TRP 119 102 102 TRP TRP B . n B 1 120 LEU 120 103 103 LEU LEU B . n B 1 121 THR 121 104 104 THR THR B . n B 1 122 ASP 122 105 105 ASP ASP B . n B 1 123 ALA 123 106 106 ALA ALA B . n B 1 124 ARG 124 107 107 ARG ARG B . n B 1 125 THR 125 108 108 THR THR B . n B 1 126 LEU 126 109 109 LEU LEU B . n B 1 127 ALA 127 110 110 ALA ALA B . n B 1 128 SER 128 111 111 SER SER B . n B 1 129 PRO 129 112 112 PRO PRO B . n B 1 130 ASN 130 113 113 ASN ASN B . n B 1 131 ILE 131 114 114 ILE ILE B . n B 1 132 VAL 132 115 115 VAL VAL B . n B 1 133 VAL 133 116 116 VAL VAL B . n B 1 134 ILE 134 117 117 ILE ILE B . n B 1 135 LEU 135 118 118 LEU LEU B . n B 1 136 CYS 136 119 119 CYS CYS B . n B 1 137 GLY 137 120 120 GLY GLY B . n B 1 138 ASN 138 121 121 ASN ASN B . n B 1 139 LYS 139 122 122 LYS LYS B . n B 1 140 LYS 140 123 123 LYS LYS B . n B 1 141 ASP 141 124 124 ASP ASP B . n B 1 142 LEU 142 125 125 LEU LEU B . n B 1 143 ASP 143 126 126 ASP ASP B . n B 1 144 PRO 144 127 127 PRO PRO B . n B 1 145 GLU 145 128 128 GLU GLU B . n B 1 146 ARG 146 129 129 ARG ARG B . n B 1 147 GLU 147 130 130 GLU GLU B . n B 1 148 VAL 148 131 131 VAL VAL B . n B 1 149 THR 149 132 132 THR THR B . n B 1 150 PHE 150 133 133 PHE PHE B . n B 1 151 LEU 151 134 134 LEU LEU B . n B 1 152 GLU 152 135 135 GLU GLU B . n B 1 153 ALA 153 136 136 ALA ALA B . n B 1 154 SER 154 137 137 SER SER B . n B 1 155 ARG 155 138 138 ARG ARG B . n B 1 156 PHE 156 139 139 PHE PHE B . n B 1 157 ALA 157 140 140 ALA ALA B . n B 1 158 GLN 158 141 141 GLN GLN B . n B 1 159 GLU 159 142 142 GLU GLU B . n B 1 160 ASN 160 143 143 ASN ASN B . n B 1 161 GLU 161 144 144 GLU GLU B . n B 1 162 LEU 162 145 145 LEU LEU B . n B 1 163 MET 163 146 146 MET MET B . n B 1 164 PHE 164 147 147 PHE PHE B . n B 1 165 LEU 165 148 148 LEU LEU B . n B 1 166 GLU 166 149 149 GLU GLU B . n B 1 167 THR 167 150 150 THR THR B . n B 1 168 SER 168 151 151 SER SER B . n B 1 169 ALA 169 152 152 ALA ALA B . n B 1 170 LEU 170 153 153 LEU LEU B . n B 1 171 THR 171 154 154 THR THR B . n B 1 172 GLY 172 155 155 GLY GLY B . n B 1 173 GLU 173 156 156 GLU GLU B . n B 1 174 ASN 174 157 157 ASN ASN B . n B 1 175 VAL 175 158 158 VAL VAL B . n B 1 176 GLU 176 159 159 GLU GLU B . n B 1 177 GLU 177 160 160 GLU GLU B . n B 1 178 ALA 178 161 161 ALA ALA B . n B 1 179 PHE 179 162 162 PHE PHE B . n B 1 180 LEU 180 163 163 LEU LEU B . n B 1 181 LYS 181 164 164 LYS LYS B . n B 1 182 CYS 182 165 165 CYS CYS B . n B 1 183 ALA 183 166 166 ALA ALA B . n B 1 184 ARG 184 167 167 ARG ARG B . n B 1 185 THR 185 168 168 THR THR B . n B 1 186 ILE 186 169 169 ILE ILE B . n B 1 187 LEU 187 170 170 LEU LEU B . n B 1 188 ASN 188 171 171 ASN ASN B . n B 1 189 LYS 189 172 172 LYS LYS B . n B 1 190 ILE 190 173 173 ILE ILE B . n B 1 191 ASP 191 174 174 ASP ASP B . n B 1 192 SER 192 175 ? ? ? B . n B 1 193 GLY 193 176 ? ? ? B . n B 1 194 GLU 194 177 ? ? ? B . n B 1 195 LEU 195 178 ? ? ? B . n B 1 196 ASP 196 179 ? ? ? B . n B 1 197 PRO 197 180 ? ? ? B . n B 1 198 GLU 198 181 ? ? ? B . n B 1 199 ARG 199 182 ? ? ? B . n B 1 200 MET 200 183 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 602 602 MG MG A . D 3 GDP 1 601 601 GDP GDP A . E 4 BME 1 603 603 BME BME A . F 5 UNX 1 1003 1003 UNX UNX A . G 2 MG 1 602 602 MG MG B . H 3 GDP 1 601 601 GDP GDP B . I 4 BME 1 603 603 BME BME B . J 6 HOH 1 1004 7 HOH HOH A . J 6 HOH 2 1005 8 HOH HOH A . J 6 HOH 3 1006 9 HOH HOH A . J 6 HOH 4 1007 10 HOH HOH A . J 6 HOH 5 1008 11 HOH HOH A . J 6 HOH 6 1009 12 HOH HOH A . J 6 HOH 7 1010 13 HOH HOH A . J 6 HOH 8 1011 14 HOH HOH A . J 6 HOH 9 1012 15 HOH HOH A . J 6 HOH 10 1013 16 HOH HOH A . J 6 HOH 11 1014 17 HOH HOH A . J 6 HOH 12 1015 18 HOH HOH A . J 6 HOH 13 1016 20 HOH HOH A . J 6 HOH 14 1017 21 HOH HOH A . J 6 HOH 15 1018 22 HOH HOH A . J 6 HOH 16 1019 23 HOH HOH A . J 6 HOH 17 1020 24 HOH HOH A . J 6 HOH 18 1021 25 HOH HOH A . J 6 HOH 19 1022 26 HOH HOH A . J 6 HOH 20 1023 27 HOH HOH A . J 6 HOH 21 1024 28 HOH HOH A . J 6 HOH 22 1025 29 HOH HOH A . J 6 HOH 23 1026 30 HOH HOH A . J 6 HOH 24 1027 31 HOH HOH A . J 6 HOH 25 1028 32 HOH HOH A . J 6 HOH 26 1029 33 HOH HOH A . J 6 HOH 27 1030 34 HOH HOH A . J 6 HOH 28 1031 35 HOH HOH A . J 6 HOH 29 1032 36 HOH HOH A . J 6 HOH 30 1033 54 HOH HOH A . J 6 HOH 31 1034 55 HOH HOH A . J 6 HOH 32 1035 56 HOH HOH A . J 6 HOH 33 1036 63 HOH HOH A . J 6 HOH 34 1037 64 HOH HOH A . J 6 HOH 35 1038 67 HOH HOH A . J 6 HOH 36 1039 69 HOH HOH A . J 6 HOH 37 1040 72 HOH HOH A . J 6 HOH 38 1041 73 HOH HOH A . K 6 HOH 1 604 1 HOH HOH B . K 6 HOH 2 605 2 HOH HOH B . K 6 HOH 3 606 3 HOH HOH B . K 6 HOH 4 607 4 HOH HOH B . K 6 HOH 5 608 5 HOH HOH B . K 6 HOH 6 609 6 HOH HOH B . K 6 HOH 7 610 19 HOH HOH B . K 6 HOH 8 611 37 HOH HOH B . K 6 HOH 9 612 38 HOH HOH B . K 6 HOH 10 613 39 HOH HOH B . K 6 HOH 11 614 40 HOH HOH B . K 6 HOH 12 615 41 HOH HOH B . K 6 HOH 13 616 42 HOH HOH B . K 6 HOH 14 617 43 HOH HOH B . K 6 HOH 15 618 44 HOH HOH B . K 6 HOH 16 619 45 HOH HOH B . K 6 HOH 17 620 46 HOH HOH B . K 6 HOH 18 621 47 HOH HOH B . K 6 HOH 19 622 48 HOH HOH B . K 6 HOH 20 623 49 HOH HOH B . K 6 HOH 21 624 50 HOH HOH B . K 6 HOH 22 625 51 HOH HOH B . K 6 HOH 23 626 52 HOH HOH B . K 6 HOH 24 627 53 HOH HOH B . K 6 HOH 25 628 57 HOH HOH B . K 6 HOH 26 629 58 HOH HOH B . K 6 HOH 27 630 59 HOH HOH B . K 6 HOH 28 631 60 HOH HOH B . K 6 HOH 29 632 61 HOH HOH B . K 6 HOH 30 633 62 HOH HOH B . K 6 HOH 31 634 65 HOH HOH B . K 6 HOH 32 635 66 HOH HOH B . K 6 HOH 33 636 68 HOH HOH B . K 6 HOH 34 637 70 HOH HOH B . K 6 HOH 35 638 71 HOH HOH B . K 6 HOH 36 639 74 HOH HOH B . K 6 HOH 37 640 75 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,J 2 1 B,G,H,I,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O2B ? D GDP . ? A GDP 601 ? 1_555 88.1 ? 2 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1004 ? 1_555 88.2 ? 3 O2B ? D GDP . ? A GDP 601 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1004 ? 1_555 176.3 ? 4 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1005 ? 1_555 89.4 ? 5 O2B ? D GDP . ? A GDP 601 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1005 ? 1_555 82.6 ? 6 O ? J HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1005 ? 1_555 96.7 ? 7 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1006 ? 1_555 173.3 ? 8 O2B ? D GDP . ? A GDP 601 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1006 ? 1_555 89.1 ? 9 O ? J HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1006 ? 1_555 94.4 ? 10 O ? J HOH . ? A HOH 1005 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1006 ? 1_555 84.2 ? 11 OG ? A SER 39 ? A SER 22 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1007 ? 1_555 85.2 ? 12 O2B ? D GDP . ? A GDP 601 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1007 ? 1_555 92.1 ? 13 O ? J HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1007 ? 1_555 88.3 ? 14 O ? J HOH . ? A HOH 1005 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1007 ? 1_555 172.6 ? 15 O ? J HOH . ? A HOH 1006 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O ? J HOH . ? A HOH 1007 ? 1_555 101.0 ? 16 OG ? B SER 39 ? B SER 22 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O2B ? H GDP . ? B GDP 601 ? 1_555 93.5 ? 17 OG ? B SER 39 ? B SER 22 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 604 ? 1_555 88.3 ? 18 O2B ? H GDP . ? B GDP 601 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 604 ? 1_555 86.5 ? 19 OG ? B SER 39 ? B SER 22 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 605 ? 1_555 83.2 ? 20 O2B ? H GDP . ? B GDP 601 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 605 ? 1_555 170.7 ? 21 O ? K HOH . ? B HOH 604 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 605 ? 1_555 84.7 ? 22 OG ? B SER 39 ? B SER 22 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 606 ? 1_555 173.3 ? 23 O2B ? H GDP . ? B GDP 601 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 606 ? 1_555 91.1 ? 24 O ? K HOH . ? B HOH 604 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 606 ? 1_555 87.1 ? 25 O ? K HOH . ? B HOH 605 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 606 ? 1_555 91.5 ? 26 OG ? B SER 39 ? B SER 22 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 607 ? 1_555 86.4 ? 27 O2B ? H GDP . ? B GDP 601 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 607 ? 1_555 99.3 ? 28 O ? K HOH . ? B HOH 604 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 607 ? 1_555 172.4 ? 29 O ? K HOH . ? B HOH 605 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 607 ? 1_555 89.2 ? 30 O ? K HOH . ? B HOH 606 ? 1_555 MG ? G MG . ? B MG 602 ? 1_555 O ? K HOH . ? B HOH 607 ? 1_555 97.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 5 'Structure model' '_struct_ref_seq_dif.details' 39 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? program 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 ARP/wARP . ? ? ? ? 'model building' ? ? ? 6 Coot . ? ? ? ? 'model building' ? ? ? 7 MolProbity . ? ? ? ? 'model building' ? ? ? 8 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;Author states that biological unit for the protein is not yet known ; 999 ;Sequence These are from isoform 2: P61018-2 ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 23 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 S2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 BME _pdbx_validate_close_contact.auth_seq_id_2 603 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.07 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 79 ? ? CZ A ARG 79 ? ? NH1 A ARG 79 ? ? 124.30 120.30 4.00 0.50 N 2 1 NE A ARG 79 ? ? CZ A ARG 79 ? ? NH2 A ARG 79 ? ? 116.81 120.30 -3.49 0.50 N 3 1 CB B ASP 89 ? ? CG B ASP 89 ? ? OD1 B ASP 89 ? ? 124.35 118.30 6.05 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 110 ? ? -90.32 -81.84 2 1 LYS A 122 ? ? 75.87 33.34 3 1 LEU A 125 ? ? -96.60 44.83 4 1 ALA B 110 ? ? -96.74 -74.89 5 1 SER B 111 ? ? -179.31 145.30 6 1 ILE B 173 ? ? -83.17 43.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 30 ? CG ? A GLU 47 CG 2 1 Y 1 A GLU 30 ? CD ? A GLU 47 CD 3 1 Y 1 A GLU 30 ? OE1 ? A GLU 47 OE1 4 1 Y 1 A GLU 30 ? OE2 ? A GLU 47 OE2 5 1 Y 1 A ARG 69 ? CD ? A ARG 86 CD 6 1 Y 1 A ARG 69 ? NE ? A ARG 86 NE 7 1 Y 1 A ARG 69 ? CZ ? A ARG 86 CZ 8 1 Y 1 A ARG 69 ? NH1 ? A ARG 86 NH1 9 1 Y 1 A ARG 69 ? NH2 ? A ARG 86 NH2 10 1 Y 1 A ARG 138 ? NE ? A ARG 155 NE 11 1 Y 1 A ARG 138 ? CZ ? A ARG 155 CZ 12 1 Y 1 A ARG 138 ? NH1 ? A ARG 155 NH1 13 1 Y 1 A ARG 138 ? NH2 ? A ARG 155 NH2 14 1 Y 1 A LYS 164 ? CE ? A LYS 181 CE 15 1 Y 1 A LYS 164 ? NZ ? A LYS 181 NZ 16 1 Y 1 A GLU 181 ? CG ? A GLU 198 CG 17 1 Y 1 A GLU 181 ? CD ? A GLU 198 CD 18 1 Y 1 A GLU 181 ? OE1 ? A GLU 198 OE1 19 1 Y 1 A GLU 181 ? OE2 ? A GLU 198 OE2 20 1 Y 1 A ARG 182 ? CD ? A ARG 199 CD 21 1 Y 1 A ARG 182 ? NE ? A ARG 199 NE 22 1 Y 1 A ARG 182 ? CZ ? A ARG 199 CZ 23 1 Y 1 A ARG 182 ? NH1 ? A ARG 199 NH1 24 1 Y 1 A ARG 182 ? NH2 ? A ARG 199 NH2 25 1 Y 1 B GLU 30 ? CG ? B GLU 47 CG 26 1 Y 1 B GLU 30 ? CD ? B GLU 47 CD 27 1 Y 1 B GLU 30 ? OE1 ? B GLU 47 OE1 28 1 Y 1 B GLU 30 ? OE2 ? B GLU 47 OE2 29 1 Y 1 B ARG 75 ? NE ? B ARG 92 NE 30 1 Y 1 B ARG 75 ? CZ ? B ARG 92 CZ 31 1 Y 1 B ARG 75 ? NH1 ? B ARG 92 NH1 32 1 Y 1 B ARG 75 ? NH2 ? B ARG 92 NH2 33 1 Y 1 B LEU 134 ? CG ? B LEU 151 CG 34 1 Y 1 B LEU 134 ? CD1 ? B LEU 151 CD1 35 1 Y 1 B LEU 134 ? CD2 ? B LEU 151 CD2 36 1 Y 1 B ARG 138 ? CZ ? B ARG 155 CZ 37 1 Y 1 B ARG 138 ? NH1 ? B ARG 155 NH1 38 1 Y 1 B ARG 138 ? NH2 ? B ARG 155 NH2 39 1 Y 1 B GLU 142 ? CG ? B GLU 159 CG 40 1 Y 1 B GLU 142 ? CD ? B GLU 159 CD 41 1 Y 1 B GLU 142 ? OE1 ? B GLU 159 OE1 42 1 Y 1 B GLU 142 ? OE2 ? B GLU 159 OE2 43 1 N 1 A BME 603 ? C1 ? E BME 1 C1 44 1 N 1 A BME 603 ? O1 ? E BME 1 O1 45 1 N 1 B BME 603 ? C1 ? I BME 1 C1 46 1 N 1 B BME 603 ? O1 ? I BME 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -16 ? A MET 1 2 1 Y 1 A GLY -15 ? A GLY 2 3 1 Y 1 A SER -14 ? A SER 3 4 1 Y 1 A SER -13 ? A SER 4 5 1 Y 1 A HIS -12 ? A HIS 5 6 1 Y 1 A HIS -11 ? A HIS 6 7 1 Y 1 A HIS -10 ? A HIS 7 8 1 Y 1 A HIS -9 ? A HIS 8 9 1 Y 1 A HIS -8 ? A HIS 9 10 1 Y 1 A HIS -7 ? A HIS 10 11 1 Y 1 A SER -6 ? A SER 11 12 1 Y 1 A SER -5 ? A SER 12 13 1 Y 1 A GLY -4 ? A GLY 13 14 1 Y 1 A LEU -3 ? A LEU 14 15 1 Y 1 A VAL -2 ? A VAL 15 16 1 Y 1 A PRO -1 ? A PRO 16 17 1 Y 1 A ARG 0 ? A ARG 17 18 1 Y 1 A GLY 1 ? A GLY 18 19 1 Y 1 A SER 2 ? A SER 19 20 1 Y 1 A ILE 3 ? A ILE 20 21 1 Y 1 A TRP 4 ? A TRP 21 22 1 Y 1 A ASN 31 ? A ASN 48 23 1 Y 1 A LYS 32 ? A LYS 49 24 1 Y 1 A PHE 33 ? A PHE 50 25 1 Y 1 A LYS 34 ? A LYS 51 26 1 Y 1 A GLN 35 ? A GLN 52 27 1 Y 1 A ASP 36 ? A ASP 53 28 1 Y 1 A SER 37 ? A SER 54 29 1 Y 1 A ASN 38 ? A ASN 55 30 1 Y 1 A HIS 39 ? A HIS 56 31 1 Y 1 A THR 40 ? A THR 57 32 1 Y 1 A ILE 41 ? A ILE 58 33 1 Y 1 A GLY 42 ? A GLY 59 34 1 Y 1 B MET -16 ? B MET 1 35 1 Y 1 B GLY -15 ? B GLY 2 36 1 Y 1 B SER -14 ? B SER 3 37 1 Y 1 B SER -13 ? B SER 4 38 1 Y 1 B HIS -12 ? B HIS 5 39 1 Y 1 B HIS -11 ? B HIS 6 40 1 Y 1 B HIS -10 ? B HIS 7 41 1 Y 1 B HIS -9 ? B HIS 8 42 1 Y 1 B HIS -8 ? B HIS 9 43 1 Y 1 B HIS -7 ? B HIS 10 44 1 Y 1 B SER -6 ? B SER 11 45 1 Y 1 B SER -5 ? B SER 12 46 1 Y 1 B GLY -4 ? B GLY 13 47 1 Y 1 B LEU -3 ? B LEU 14 48 1 Y 1 B VAL -2 ? B VAL 15 49 1 Y 1 B PRO -1 ? B PRO 16 50 1 Y 1 B ARG 0 ? B ARG 17 51 1 Y 1 B GLY 1 ? B GLY 18 52 1 Y 1 B SER 2 ? B SER 19 53 1 Y 1 B ILE 3 ? B ILE 20 54 1 Y 1 B TRP 4 ? B TRP 21 55 1 Y 1 B ASN 31 ? B ASN 48 56 1 Y 1 B LYS 32 ? B LYS 49 57 1 Y 1 B PHE 33 ? B PHE 50 58 1 Y 1 B LYS 34 ? B LYS 51 59 1 Y 1 B GLN 35 ? B GLN 52 60 1 Y 1 B ASP 36 ? B ASP 53 61 1 Y 1 B SER 37 ? B SER 54 62 1 Y 1 B ASN 38 ? B ASN 55 63 1 Y 1 B HIS 39 ? B HIS 56 64 1 Y 1 B THR 40 ? B THR 57 65 1 Y 1 B ILE 41 ? B ILE 58 66 1 Y 1 B GLY 42 ? B GLY 59 67 1 Y 1 B SER 175 ? B SER 192 68 1 Y 1 B GLY 176 ? B GLY 193 69 1 Y 1 B GLU 177 ? B GLU 194 70 1 Y 1 B LEU 178 ? B LEU 195 71 1 Y 1 B ASP 179 ? B ASP 196 72 1 Y 1 B PRO 180 ? B PRO 197 73 1 Y 1 B GLU 181 ? B GLU 198 74 1 Y 1 B ARG 182 ? B ARG 199 75 1 Y 1 B MET 183 ? B MET 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BME C1 C N N 74 BME C2 C N N 75 BME O1 O N N 76 BME S2 S N N 77 BME H11 H N N 78 BME H12 H N N 79 BME H21 H N N 80 BME H22 H N N 81 BME HO1 H N N 82 BME HS2 H N N 83 CYS N N N N 84 CYS CA C N R 85 CYS C C N N 86 CYS O O N N 87 CYS CB C N N 88 CYS SG S N N 89 CYS OXT O N N 90 CYS H H N N 91 CYS H2 H N N 92 CYS HA H N N 93 CYS HB2 H N N 94 CYS HB3 H N N 95 CYS HG H N N 96 CYS HXT H N N 97 GDP PB P N N 98 GDP O1B O N N 99 GDP O2B O N N 100 GDP O3B O N N 101 GDP O3A O N N 102 GDP PA P N N 103 GDP O1A O N N 104 GDP O2A O N N 105 GDP "O5'" O N N 106 GDP "C5'" C N N 107 GDP "C4'" C N R 108 GDP "O4'" O N N 109 GDP "C3'" C N S 110 GDP "O3'" O N N 111 GDP "C2'" C N R 112 GDP "O2'" O N N 113 GDP "C1'" C N R 114 GDP N9 N Y N 115 GDP C8 C Y N 116 GDP N7 N Y N 117 GDP C5 C Y N 118 GDP C6 C N N 119 GDP O6 O N N 120 GDP N1 N N N 121 GDP C2 C N N 122 GDP N2 N N N 123 GDP N3 N N N 124 GDP C4 C Y N 125 GDP HOB2 H N N 126 GDP HOB3 H N N 127 GDP HOA2 H N N 128 GDP "H5'" H N N 129 GDP "H5''" H N N 130 GDP "H4'" H N N 131 GDP "H3'" H N N 132 GDP "HO3'" H N N 133 GDP "H2'" H N N 134 GDP "HO2'" H N N 135 GDP "H1'" H N N 136 GDP H8 H N N 137 GDP HN1 H N N 138 GDP HN21 H N N 139 GDP HN22 H N N 140 GLN N N N N 141 GLN CA C N S 142 GLN C C N N 143 GLN O O N N 144 GLN CB C N N 145 GLN CG C N N 146 GLN CD C N N 147 GLN OE1 O N N 148 GLN NE2 N N N 149 GLN OXT O N N 150 GLN H H N N 151 GLN H2 H N N 152 GLN HA H N N 153 GLN HB2 H N N 154 GLN HB3 H N N 155 GLN HG2 H N N 156 GLN HG3 H N N 157 GLN HE21 H N N 158 GLN HE22 H N N 159 GLN HXT H N N 160 GLU N N N N 161 GLU CA C N S 162 GLU C C N N 163 GLU O O N N 164 GLU CB C N N 165 GLU CG C N N 166 GLU CD C N N 167 GLU OE1 O N N 168 GLU OE2 O N N 169 GLU OXT O N N 170 GLU H H N N 171 GLU H2 H N N 172 GLU HA H N N 173 GLU HB2 H N N 174 GLU HB3 H N N 175 GLU HG2 H N N 176 GLU HG3 H N N 177 GLU HE2 H N N 178 GLU HXT H N N 179 GLY N N N N 180 GLY CA C N N 181 GLY C C N N 182 GLY O O N N 183 GLY OXT O N N 184 GLY H H N N 185 GLY H2 H N N 186 GLY HA2 H N N 187 GLY HA3 H N N 188 GLY HXT H N N 189 HIS N N N N 190 HIS CA C N S 191 HIS C C N N 192 HIS O O N N 193 HIS CB C N N 194 HIS CG C Y N 195 HIS ND1 N Y N 196 HIS CD2 C Y N 197 HIS CE1 C Y N 198 HIS NE2 N Y N 199 HIS OXT O N N 200 HIS H H N N 201 HIS H2 H N N 202 HIS HA H N N 203 HIS HB2 H N N 204 HIS HB3 H N N 205 HIS HD1 H N N 206 HIS HD2 H N N 207 HIS HE1 H N N 208 HIS HE2 H N N 209 HIS HXT H N N 210 HOH O O N N 211 HOH H1 H N N 212 HOH H2 H N N 213 ILE N N N N 214 ILE CA C N S 215 ILE C C N N 216 ILE O O N N 217 ILE CB C N S 218 ILE CG1 C N N 219 ILE CG2 C N N 220 ILE CD1 C N N 221 ILE OXT O N N 222 ILE H H N N 223 ILE H2 H N N 224 ILE HA H N N 225 ILE HB H N N 226 ILE HG12 H N N 227 ILE HG13 H N N 228 ILE HG21 H N N 229 ILE HG22 H N N 230 ILE HG23 H N N 231 ILE HD11 H N N 232 ILE HD12 H N N 233 ILE HD13 H N N 234 ILE HXT H N N 235 LEU N N N N 236 LEU CA C N S 237 LEU C C N N 238 LEU O O N N 239 LEU CB C N N 240 LEU CG C N N 241 LEU CD1 C N N 242 LEU CD2 C N N 243 LEU OXT O N N 244 LEU H H N N 245 LEU H2 H N N 246 LEU HA H N N 247 LEU HB2 H N N 248 LEU HB3 H N N 249 LEU HG H N N 250 LEU HD11 H N N 251 LEU HD12 H N N 252 LEU HD13 H N N 253 LEU HD21 H N N 254 LEU HD22 H N N 255 LEU HD23 H N N 256 LEU HXT H N N 257 LYS N N N N 258 LYS CA C N S 259 LYS C C N N 260 LYS O O N N 261 LYS CB C N N 262 LYS CG C N N 263 LYS CD C N N 264 LYS CE C N N 265 LYS NZ N N N 266 LYS OXT O N N 267 LYS H H N N 268 LYS H2 H N N 269 LYS HA H N N 270 LYS HB2 H N N 271 LYS HB3 H N N 272 LYS HG2 H N N 273 LYS HG3 H N N 274 LYS HD2 H N N 275 LYS HD3 H N N 276 LYS HE2 H N N 277 LYS HE3 H N N 278 LYS HZ1 H N N 279 LYS HZ2 H N N 280 LYS HZ3 H N N 281 LYS HXT H N N 282 MET N N N N 283 MET CA C N S 284 MET C C N N 285 MET O O N N 286 MET CB C N N 287 MET CG C N N 288 MET SD S N N 289 MET CE C N N 290 MET OXT O N N 291 MET H H N N 292 MET H2 H N N 293 MET HA H N N 294 MET HB2 H N N 295 MET HB3 H N N 296 MET HG2 H N N 297 MET HG3 H N N 298 MET HE1 H N N 299 MET HE2 H N N 300 MET HE3 H N N 301 MET HXT H N N 302 MG MG MG N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 TRP N N N N 375 TRP CA C N S 376 TRP C C N N 377 TRP O O N N 378 TRP CB C N N 379 TRP CG C Y N 380 TRP CD1 C Y N 381 TRP CD2 C Y N 382 TRP NE1 N Y N 383 TRP CE2 C Y N 384 TRP CE3 C Y N 385 TRP CZ2 C Y N 386 TRP CZ3 C Y N 387 TRP CH2 C Y N 388 TRP OXT O N N 389 TRP H H N N 390 TRP H2 H N N 391 TRP HA H N N 392 TRP HB2 H N N 393 TRP HB3 H N N 394 TRP HD1 H N N 395 TRP HE1 H N N 396 TRP HE3 H N N 397 TRP HZ2 H N N 398 TRP HZ3 H N N 399 TRP HH2 H N N 400 TRP HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BME C1 C2 sing N N 70 BME C1 O1 sing N N 71 BME C1 H11 sing N N 72 BME C1 H12 sing N N 73 BME C2 S2 sing N N 74 BME C2 H21 sing N N 75 BME C2 H22 sing N N 76 BME O1 HO1 sing N N 77 BME S2 HS2 sing N N 78 CYS N CA sing N N 79 CYS N H sing N N 80 CYS N H2 sing N N 81 CYS CA C sing N N 82 CYS CA CB sing N N 83 CYS CA HA sing N N 84 CYS C O doub N N 85 CYS C OXT sing N N 86 CYS CB SG sing N N 87 CYS CB HB2 sing N N 88 CYS CB HB3 sing N N 89 CYS SG HG sing N N 90 CYS OXT HXT sing N N 91 GDP PB O1B doub N N 92 GDP PB O2B sing N N 93 GDP PB O3B sing N N 94 GDP PB O3A sing N N 95 GDP O2B HOB2 sing N N 96 GDP O3B HOB3 sing N N 97 GDP O3A PA sing N N 98 GDP PA O1A doub N N 99 GDP PA O2A sing N N 100 GDP PA "O5'" sing N N 101 GDP O2A HOA2 sing N N 102 GDP "O5'" "C5'" sing N N 103 GDP "C5'" "C4'" sing N N 104 GDP "C5'" "H5'" sing N N 105 GDP "C5'" "H5''" sing N N 106 GDP "C4'" "O4'" sing N N 107 GDP "C4'" "C3'" sing N N 108 GDP "C4'" "H4'" sing N N 109 GDP "O4'" "C1'" sing N N 110 GDP "C3'" "O3'" sing N N 111 GDP "C3'" "C2'" sing N N 112 GDP "C3'" "H3'" sing N N 113 GDP "O3'" "HO3'" sing N N 114 GDP "C2'" "O2'" sing N N 115 GDP "C2'" "C1'" sing N N 116 GDP "C2'" "H2'" sing N N 117 GDP "O2'" "HO2'" sing N N 118 GDP "C1'" N9 sing N N 119 GDP "C1'" "H1'" sing N N 120 GDP N9 C8 sing Y N 121 GDP N9 C4 sing Y N 122 GDP C8 N7 doub Y N 123 GDP C8 H8 sing N N 124 GDP N7 C5 sing Y N 125 GDP C5 C6 sing N N 126 GDP C5 C4 doub Y N 127 GDP C6 O6 doub N N 128 GDP C6 N1 sing N N 129 GDP N1 C2 sing N N 130 GDP N1 HN1 sing N N 131 GDP C2 N2 sing N N 132 GDP C2 N3 doub N N 133 GDP N2 HN21 sing N N 134 GDP N2 HN22 sing N N 135 GDP N3 C4 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 BETA-MERCAPTOETHANOL BME 5 'UNKNOWN ATOM OR ION' UNX 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BME _pdbx_initial_refinement_model.details 'pdb entry 2bme' #