HEADER HYDROLASE 06-DEC-06 2O5U TITLE CRYSTAL STRUCTURE OF THE PA5185 PROTEIN FROM PSEUDOMONAS AERUGINOSA TITLE 2 STRAIN PAO1- ORTHORHOMBIC FORM (C222). COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOESTERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA5185; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PUTATIVE THIOESTERESE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CHRUSZCZ,S.WANG,E.EVDOKIMOVA,K.D.KOCLEGA,M.KUDRITSKA,A.SAVCHENKO, AUTHOR 2 A.EDWARDS,W.MINOR REVDAT 8 30-AUG-23 2O5U 1 REMARK REVDAT 7 13-APR-22 2O5U 1 AUTHOR JRNL SEQADV REVDAT 6 13-JUL-11 2O5U 1 VERSN REVDAT 5 29-DEC-09 2O5U 1 JRNL REVDAT 4 14-APR-09 2O5U 1 JRNL REVDAT 3 24-FEB-09 2O5U 1 VERSN REVDAT 2 18-NOV-08 2O5U 1 JRNL REVDAT 1 18-DEC-07 2O5U 0 JRNL AUTH M.CHRUSZCZ,M.D.ZIMMERMAN,S.WANG,K.D.KOCLEGA,H.ZHENG, JRNL AUTH 2 E.EVDOKIMOVA,M.KUDRITSKA,M.CYMBOROWSKI,A.SAVCHENKO, JRNL AUTH 3 A.EDWARDS,W.MINOR JRNL TITL FUNCTION-BIASED CHOICE OF ADDITIVES FOR OPTIMIZATION OF JRNL TITL 2 PROTEIN CRYSTALLIZATION - THE CASE OF THE PUTATIVE JRNL TITL 3 THIOESTERASE PA5185 FROM PSEUDOMONAS AERUGINOSA PAO1. JRNL REF CRYST.GROWTH DES. V. 8 4054 2008 JRNL REFN ISSN 1528-7483 JRNL PMID 19898606 JRNL DOI 10.1021/CG800430F REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 39591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2103 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2443 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3315 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.56000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : 0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.938 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3420 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4660 ; 1.697 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 7.190 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 170 ;39.716 ;23.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 507 ;16.124 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;16.173 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 512 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2695 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1571 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2391 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 228 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 121 ; 0.214 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 35 ; 0.161 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2195 ; 1.145 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3425 ; 1.758 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1396 ; 2.808 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1233 ; 4.188 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 6 A 143 4 REMARK 3 1 B 6 B 144 4 REMARK 3 1 C 6 C 144 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1036 ; 0.30 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1036 ; 0.33 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1036 ; 0.34 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1036 ; 1.28 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1036 ; 1.52 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1036 ; 1.38 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41694 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : 0.39300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2AV9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.1M BIS-TRIS, 0.05M REMARK 280 MES, PH 5.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 62.01950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.07850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 62.01950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.07850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 62.01950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.07850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 62.01950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.07850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 62.01950 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 74.07850 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 58.32800 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 58.32800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 156 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 144 REMARK 465 SER A 145 REMARK 465 ALA A 146 REMARK 465 GLN A 147 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 THR C 3 REMARK 465 ALA C 4 REMARK 465 PRO C 5 REMARK 465 ALA C 146 REMARK 465 GLN C 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 51 CD NE CZ NH1 NH2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 ARG A 81 CZ NH1 NH2 REMARK 470 ARG A 108 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 115 NE CZ NH1 NH2 REMARK 470 ARG A 124 CD NE CZ NH1 NH2 REMARK 470 ARG A 127 CD NE CZ NH1 NH2 REMARK 470 ARG B 9 NE CZ NH1 NH2 REMARK 470 ARG B 51 CD NE CZ NH1 NH2 REMARK 470 ARG B 81 CZ NH1 NH2 REMARK 470 ARG B 90 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 108 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 115 NE CZ NH1 NH2 REMARK 470 ARG B 124 CD NE CZ NH1 NH2 REMARK 470 ARG C 90 CD NE CZ NH1 NH2 REMARK 470 ARG C 108 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 134 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 26 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 26 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP C 26 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 136 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -122.82 -135.18 REMARK 500 ASP A 26 -164.83 -104.44 REMARK 500 SER B 94 -0.70 -152.31 REMARK 500 ASP C 26 -164.77 -100.64 REMARK 500 SER C 144 66.21 -108.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 146 GLN B 147 147.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AV9 RELATED DB: PDB DBREF 2O5U A 1 147 UNP Q9HU04 Q9HU04_PSEAE 1 147 DBREF 2O5U B 1 147 UNP Q9HU04 Q9HU04_PSEAE 1 147 DBREF 2O5U C 1 147 UNP Q9HU04 Q9HU04_PSEAE 1 147 SEQADV 2O5U ALA A 0 UNP Q9HU04 EXPRESSION TAG SEQADV 2O5U ALA B 0 UNP Q9HU04 EXPRESSION TAG SEQADV 2O5U ALA C 0 UNP Q9HU04 EXPRESSION TAG SEQRES 1 A 148 ALA MET ALA THR ALA PRO ARG PRO LEU ARG GLU GLN TYR SEQRES 2 A 148 LEU HIS PHE GLN PRO ILE SER THR ARG TRP HIS ASP ASN SEQRES 3 A 148 ASP ILE TYR GLY HIS VAL ASN ASN VAL THR TYR TYR ALA SEQRES 4 A 148 PHE PHE ASP THR ALA VAL ASN THR TYR LEU ILE GLU ARG SEQRES 5 A 148 GLY GLY LEU ASP ILE GLN GLY GLY GLU VAL ILE GLY LEU SEQRES 6 A 148 VAL VAL SER SER SER CYS ASP TYR PHE ALA PRO VAL ALA SEQRES 7 A 148 PHE PRO GLN ARG ILE GLU MET GLY LEU ARG VAL ALA ARG SEQRES 8 A 148 LEU GLY ASN SER SER VAL GLN TYR GLU LEU ALA LEU PHE SEQRES 9 A 148 LEU GLU GLY GLN ARG GLU ALA CYS ALA ALA GLY ARG PHE SEQRES 10 A 148 VAL HIS VAL PHE VAL GLU ARG ARG SER SER ARG PRO VAL SEQRES 11 A 148 ALA ILE PRO GLN GLU LEU ARG ASP ALA LEU ALA ALA LEU SEQRES 12 A 148 GLN SER SER ALA GLN SEQRES 1 B 148 ALA MET ALA THR ALA PRO ARG PRO LEU ARG GLU GLN TYR SEQRES 2 B 148 LEU HIS PHE GLN PRO ILE SER THR ARG TRP HIS ASP ASN SEQRES 3 B 148 ASP ILE TYR GLY HIS VAL ASN ASN VAL THR TYR TYR ALA SEQRES 4 B 148 PHE PHE ASP THR ALA VAL ASN THR TYR LEU ILE GLU ARG SEQRES 5 B 148 GLY GLY LEU ASP ILE GLN GLY GLY GLU VAL ILE GLY LEU SEQRES 6 B 148 VAL VAL SER SER SER CYS ASP TYR PHE ALA PRO VAL ALA SEQRES 7 B 148 PHE PRO GLN ARG ILE GLU MET GLY LEU ARG VAL ALA ARG SEQRES 8 B 148 LEU GLY ASN SER SER VAL GLN TYR GLU LEU ALA LEU PHE SEQRES 9 B 148 LEU GLU GLY GLN ARG GLU ALA CYS ALA ALA GLY ARG PHE SEQRES 10 B 148 VAL HIS VAL PHE VAL GLU ARG ARG SER SER ARG PRO VAL SEQRES 11 B 148 ALA ILE PRO GLN GLU LEU ARG ASP ALA LEU ALA ALA LEU SEQRES 12 B 148 GLN SER SER ALA GLN SEQRES 1 C 148 ALA MET ALA THR ALA PRO ARG PRO LEU ARG GLU GLN TYR SEQRES 2 C 148 LEU HIS PHE GLN PRO ILE SER THR ARG TRP HIS ASP ASN SEQRES 3 C 148 ASP ILE TYR GLY HIS VAL ASN ASN VAL THR TYR TYR ALA SEQRES 4 C 148 PHE PHE ASP THR ALA VAL ASN THR TYR LEU ILE GLU ARG SEQRES 5 C 148 GLY GLY LEU ASP ILE GLN GLY GLY GLU VAL ILE GLY LEU SEQRES 6 C 148 VAL VAL SER SER SER CYS ASP TYR PHE ALA PRO VAL ALA SEQRES 7 C 148 PHE PRO GLN ARG ILE GLU MET GLY LEU ARG VAL ALA ARG SEQRES 8 C 148 LEU GLY ASN SER SER VAL GLN TYR GLU LEU ALA LEU PHE SEQRES 9 C 148 LEU GLU GLY GLN ARG GLU ALA CYS ALA ALA GLY ARG PHE SEQRES 10 C 148 VAL HIS VAL PHE VAL GLU ARG ARG SER SER ARG PRO VAL SEQRES 11 C 148 ALA ILE PRO GLN GLU LEU ARG ASP ALA LEU ALA ALA LEU SEQRES 12 C 148 GLN SER SER ALA GLN FORMUL 4 HOH *274(H2 O) HELIX 1 1 LEU A 8 TYR A 12 5 5 HELIX 2 2 ARG A 21 ASN A 25 5 5 HELIX 3 3 ASN A 32 GLY A 53 1 22 HELIX 4 4 PRO A 132 ALA A 141 1 10 HELIX 5 5 LEU B 8 TYR B 12 5 5 HELIX 6 6 ARG B 21 ASN B 25 5 5 HELIX 7 7 ASN B 32 GLY B 53 1 22 HELIX 8 8 PRO B 132 LEU B 142 1 11 HELIX 9 9 LEU C 8 TYR C 12 5 5 HELIX 10 10 ARG C 21 ASN C 25 5 5 HELIX 11 11 ASN C 32 GLY C 53 1 22 HELIX 12 12 PRO C 132 ALA C 141 1 10 SHEET 1 A10 HIS A 14 ILE A 18 0 SHEET 2 A10 ILE A 82 LEU A 91 -1 O MET A 84 N GLN A 16 SHEET 3 A10 SER A 95 LEU A 104 -1 O GLU A 99 N ARG A 87 SHEET 4 A10 ALA A 112 GLU A 122 -1 O PHE A 116 N TYR A 98 SHEET 5 A10 VAL A 61 TYR A 72 -1 N LEU A 64 O VAL A 119 SHEET 6 A10 VAL B 61 TYR B 72 -1 O VAL B 66 N TYR A 72 SHEET 7 A10 ALA B 112 GLU B 122 -1 O VAL B 119 N LEU B 64 SHEET 8 A10 SER B 95 LEU B 104 -1 N TYR B 98 O PHE B 116 SHEET 9 A10 ILE B 82 LEU B 91 -1 N GLY B 85 O ALA B 101 SHEET 10 A10 HIS B 14 ILE B 18 -1 N GLN B 16 O MET B 84 SHEET 1 B 5 HIS C 14 ILE C 18 0 SHEET 2 B 5 ILE C 82 LEU C 91 -1 O MET C 84 N GLN C 16 SHEET 3 B 5 SER C 95 LEU C 104 -1 O ALA C 101 N GLY C 85 SHEET 4 B 5 ALA C 112 GLU C 122 -1 O PHE C 116 N TYR C 98 SHEET 5 B 5 VAL C 61 TYR C 72 -1 N LEU C 64 O VAL C 119 CISPEP 1 PHE A 78 PRO A 79 0 6.52 CISPEP 2 PHE B 78 PRO B 79 0 0.70 CISPEP 3 PHE C 78 PRO C 79 0 9.60 CISPEP 4 SER C 144 SER C 145 0 2.16 CRYST1 124.039 148.157 58.328 90.00 90.00 90.00 C 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008062 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017144 0.00000