HEADER HYDROLASE 08-DEC-06 2O6U TITLE CRYSTAL STRUCTURE OF THE PA5185 PROTEIN FROM PSEUDOMONAS AERUGINOSA TITLE 2 STRAIN PAO1- NEW CRYSTAL FORM. COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA5185; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PUTATIVE THIOESTERASE, HOT-DOG FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CHRUSZCZ,K.D.KOCLEGA,E.EVDOKIMOVA,M.CYMBOROWSKI,M.KUDRITSKA, AUTHOR 2 A.SAVCHENKO,A.EDWARDS,W.MINOR REVDAT 7 30-AUG-23 2O6U 1 REMARK REVDAT 6 13-APR-22 2O6U 1 AUTHOR JRNL SEQADV REVDAT 5 29-DEC-09 2O6U 1 JRNL REVDAT 4 14-APR-09 2O6U 1 JRNL COMPND REVDAT 3 24-FEB-09 2O6U 1 VERSN REVDAT 2 18-NOV-08 2O6U 1 JRNL REVDAT 1 11-DEC-07 2O6U 0 JRNL AUTH M.CHRUSZCZ,M.D.ZIMMERMAN,S.WANG,K.D.KOCLEGA,H.ZHENG, JRNL AUTH 2 E.EVDOKIMOVA,M.KUDRITSKA,M.CYMBOROWSKI,A.SAVCHENKO, JRNL AUTH 3 A.EDWARDS,W.MINOR JRNL TITL FUNCTION-BIASED CHOICE OF ADDITIVES FOR OPTIMIZATION OF JRNL TITL 2 PROTEIN CRYSTALLIZATION - THE CASE OF THE PUTATIVE JRNL TITL 3 THIOESTERASE PA5185 FROM PSEUDOMONAS AERUGINOSA PAO1. JRNL REF CRYST.GROWTH DES. V. 8 4054 2008 JRNL REFN ISSN 1528-7483 JRNL PMID 19898606 JRNL DOI 10.1021/CG800430F REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 8203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 408 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 614 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2135 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : -0.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.376 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.301 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.414 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.886 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2187 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2976 ; 1.842 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 8.061 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;41.055 ;23.396 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 315 ;20.616 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.988 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.145 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1723 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 942 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1499 ; 0.324 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 68 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 83 ; 0.200 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.165 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1417 ; 0.969 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2203 ; 1.496 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 885 ; 2.046 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 773 ; 3.142 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 6 A 144 2 REMARK 3 1 B 6 B 144 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 556 ; 0.07 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 498 ; 0.39 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 556 ; 0.11 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 498 ; 0.75 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): -39.4010 46.6790 -6.3620 REMARK 3 T TENSOR REMARK 3 T11: 0.0699 T22: 0.2314 REMARK 3 T33: 0.1738 T12: -0.0081 REMARK 3 T13: 0.0418 T23: -0.1634 REMARK 3 L TENSOR REMARK 3 L11: 3.6082 L22: 2.0029 REMARK 3 L33: 4.1053 L12: 0.2752 REMARK 3 L13: 0.4545 L23: 0.2450 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: -0.2840 S13: 0.3470 REMARK 3 S21: 0.3059 S22: -0.3126 S23: 0.4989 REMARK 3 S31: -0.2973 S32: -0.6621 S33: 0.2952 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): -53.6660 13.4550 14.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: -0.0458 REMARK 3 T33: 0.1330 T12: 0.0493 REMARK 3 T13: -0.0467 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.1759 L22: 3.8155 REMARK 3 L33: 4.2073 L12: 0.1237 REMARK 3 L13: -0.6008 L23: -1.2701 REMARK 3 S TENSOR REMARK 3 S11: -0.2155 S12: 0.0048 S13: 0.4045 REMARK 3 S21: 0.1372 S22: 0.1504 S23: 0.3074 REMARK 3 S31: -0.3063 S32: -0.2992 S33: 0.0651 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REFMAC 5.2.0019 AND COOT WERE USED FOR REFINEMENT. REMARK 4 REMARK 4 2O6U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000040760. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8614 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : 0.42800 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2AV9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.1M BIS-TRIS PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.15600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.57800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.57800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.15600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -28.57800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 PRO A 5 REMARK 465 SER A 145 REMARK 465 ALA A 146 REMARK 465 GLN A 147 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 PRO B 5 REMARK 465 SER B 145 REMARK 465 ALA B 146 REMARK 465 GLN B 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 13 CG CD1 CD2 REMARK 470 ARG A 51 CD NE CZ NH1 NH2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 ILE A 82 CG1 CG2 CD1 REMARK 470 ARG A 87 CZ NH1 NH2 REMARK 470 ARG A 90 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 123 CZ NH1 NH2 REMARK 470 ARG A 124 CD NE CZ NH1 NH2 REMARK 470 ARG A 127 CD NE CZ NH1 NH2 REMARK 470 LEU A 135 CD1 CD2 REMARK 470 ASP A 137 CG OD1 OD2 REMARK 470 LEU B 54 CG CD1 CD2 REMARK 470 ASP B 55 CG OD1 OD2 REMARK 470 GLU B 60 CG CD OE1 OE2 REMARK 470 ILE B 82 CG1 CG2 CD1 REMARK 470 ARG B 115 NE CZ NH1 NH2 REMARK 470 ARG B 123 CZ NH1 NH2 REMARK 470 ARG B 124 CD NE CZ NH1 NH2 REMARK 470 ARG B 127 CD NE CZ NH1 NH2 REMARK 470 LEU B 135 CD1 CD2 REMARK 470 ASP B 137 CG OD1 OD2 REMARK 470 LEU B 139 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 6 CZ ARG A 6 NH1 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 41 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 55 49.37 74.96 REMARK 500 SER A 126 33.29 37.16 REMARK 500 LEU B 54 127.13 -37.92 REMARK 500 ASP B 55 41.73 89.37 REMARK 500 ALA B 89 -61.02 -96.05 REMARK 500 LEU B 91 83.09 -151.57 REMARK 500 PRO B 128 150.63 -47.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 105 GLY A 106 -34.80 REMARK 500 GLN B 57 GLY B 58 56.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AV9 RELATED DB: PDB REMARK 900 RELATED ID: 2O5U RELATED DB: PDB REMARK 900 RELATED ID: 2O6B RELATED DB: PDB REMARK 900 RELATED ID: 2O6T RELATED DB: PDB DBREF 2O6U A 1 147 UNP Q9HU04 Q9HU04_PSEAE 1 147 DBREF 2O6U B 1 147 UNP Q9HU04 Q9HU04_PSEAE 1 147 SEQADV 2O6U GLY A -1 UNP Q9HU04 EXPRESSION TAG SEQADV 2O6U HIS A 0 UNP Q9HU04 EXPRESSION TAG SEQADV 2O6U GLY B -1 UNP Q9HU04 EXPRESSION TAG SEQADV 2O6U HIS B 0 UNP Q9HU04 EXPRESSION TAG SEQRES 1 A 149 GLY HIS MET ALA THR ALA PRO ARG PRO LEU ARG GLU GLN SEQRES 2 A 149 TYR LEU HIS PHE GLN PRO ILE SER THR ARG TRP HIS ASP SEQRES 3 A 149 ASN ASP ILE TYR GLY HIS VAL ASN ASN VAL THR TYR TYR SEQRES 4 A 149 ALA PHE PHE ASP THR ALA VAL ASN THR TYR LEU ILE GLU SEQRES 5 A 149 ARG GLY GLY LEU ASP ILE GLN GLY GLY GLU VAL ILE GLY SEQRES 6 A 149 LEU VAL VAL SER SER SER CYS ASP TYR PHE ALA PRO VAL SEQRES 7 A 149 ALA PHE PRO GLN ARG ILE GLU MET GLY LEU ARG VAL ALA SEQRES 8 A 149 ARG LEU GLY ASN SER SER VAL GLN TYR GLU LEU ALA LEU SEQRES 9 A 149 PHE LEU GLU GLY GLN ARG GLU ALA CYS ALA ALA GLY ARG SEQRES 10 A 149 PHE VAL HIS VAL PHE VAL GLU ARG ARG SER SER ARG PRO SEQRES 11 A 149 VAL ALA ILE PRO GLN GLU LEU ARG ASP ALA LEU ALA ALA SEQRES 12 A 149 LEU GLN SER SER ALA GLN SEQRES 1 B 149 GLY HIS MET ALA THR ALA PRO ARG PRO LEU ARG GLU GLN SEQRES 2 B 149 TYR LEU HIS PHE GLN PRO ILE SER THR ARG TRP HIS ASP SEQRES 3 B 149 ASN ASP ILE TYR GLY HIS VAL ASN ASN VAL THR TYR TYR SEQRES 4 B 149 ALA PHE PHE ASP THR ALA VAL ASN THR TYR LEU ILE GLU SEQRES 5 B 149 ARG GLY GLY LEU ASP ILE GLN GLY GLY GLU VAL ILE GLY SEQRES 6 B 149 LEU VAL VAL SER SER SER CYS ASP TYR PHE ALA PRO VAL SEQRES 7 B 149 ALA PHE PRO GLN ARG ILE GLU MET GLY LEU ARG VAL ALA SEQRES 8 B 149 ARG LEU GLY ASN SER SER VAL GLN TYR GLU LEU ALA LEU SEQRES 9 B 149 PHE LEU GLU GLY GLN ARG GLU ALA CYS ALA ALA GLY ARG SEQRES 10 B 149 PHE VAL HIS VAL PHE VAL GLU ARG ARG SER SER ARG PRO SEQRES 11 B 149 VAL ALA ILE PRO GLN GLU LEU ARG ASP ALA LEU ALA ALA SEQRES 12 B 149 LEU GLN SER SER ALA GLN FORMUL 3 HOH *11(H2 O) HELIX 1 1 LEU A 8 TYR A 12 5 5 HELIX 2 2 ARG A 21 ASN A 25 5 5 HELIX 3 3 VAL A 34 GLY A 53 1 20 HELIX 4 4 PRO A 132 ALA A 141 1 10 HELIX 5 5 LEU B 8 TYR B 12 5 5 HELIX 6 6 ARG B 21 ASN B 25 5 5 HELIX 7 7 ASN B 32 GLY B 53 1 22 HELIX 8 8 PRO B 132 ALA B 141 1 10 SHEET 1 A 5 HIS A 14 SER A 19 0 SHEET 2 A 5 ARG A 81 ARG A 90 -1 O MET A 84 N GLN A 16 SHEET 3 A 5 SER A 95 LEU A 104 -1 O PHE A 103 N GLU A 83 SHEET 4 A 5 ALA A 112 GLU A 122 -1 O GLY A 114 N LEU A 100 SHEET 5 A 5 VAL A 61 TYR A 72 -1 N LEU A 64 O VAL A 119 SHEET 1 B 5 HIS B 14 ILE B 18 0 SHEET 2 B 5 ILE B 82 ARG B 90 -1 O MET B 84 N GLN B 16 SHEET 3 B 5 SER B 95 LEU B 104 -1 O PHE B 103 N GLU B 83 SHEET 4 B 5 ALA B 112 GLU B 122 -1 O GLY B 114 N LEU B 100 SHEET 5 B 5 VAL B 61 TYR B 72 -1 N ASP B 71 O ALA B 113 CISPEP 1 LEU A 54 ASP A 55 0 13.00 CISPEP 2 PHE A 78 PRO A 79 0 4.12 CISPEP 3 LEU B 54 ASP B 55 0 -0.59 CISPEP 4 PHE B 78 PRO B 79 0 2.79 CRYST1 93.099 93.099 85.734 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010741 0.006201 0.000000 0.00000 SCALE2 0.000000 0.012403 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011664 0.00000