HEADER SIGNALING PROTEIN 12-DEC-06 2O8P TITLE CRYSTAL STRUCTURE OF A PUTATIVE 14-3-3 PROTEIN FROM CRYPTOSPORIDIUM TITLE 2 PARVUM, CGD7_2470 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 DOMAIN CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM; SOURCE 3 ORGANISM_TAXID: 5807; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA-R3; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P15-TEV-LIC DERIVED FROM PET15 KEYWDS SIGNALING PROTEIN, 14-3-3, CELL REGULATOR PROTEIN, CRYPTOSPORIDIUM KEYWDS 2 PARVUM, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,J.LEW,G.WASNEY,L.LIN,A.HASSANALI,Y.ZHAO,M.VEDADI, AUTHOR 2 I.KOZIERADZKI,A.M.EDWARDS,C.H.ARROWSMITH,J.WEIGELT,M.SUNDSTROM, AUTHOR 3 J.R.WALKER,A.BOCHKAREV,R.HUI,S.J.BROKX,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 6 20-NOV-24 2O8P 1 REMARK REVDAT 5 27-DEC-23 2O8P 1 SEQADV LINK REVDAT 4 18-OCT-17 2O8P 1 REMARK REVDAT 3 22-FEB-12 2O8P 1 JRNL VERSN REVDAT 2 24-FEB-09 2O8P 1 VERSN REVDAT 1 09-JAN-07 2O8P 0 JRNL AUTH S.J.BROKX,A.K.WERNIMONT,A.DONG,G.A.WASNEY,Y.H.LIN,J.LEW, JRNL AUTH 2 M.VEDADI,W.H.LEE,R.HUI JRNL TITL CHARACTERIZATION OF 14-3-3 PROTEINS FROM CRYPTOSPORIDIUM JRNL TITL 2 PARVUM. JRNL REF PLOS ONE V. 6 14827 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 21853016 JRNL DOI 10.1371/JOURNAL.PONE.0014827 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 27920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 757 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1775 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 235 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.513 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1884 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2533 ; 1.204 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 230 ; 4.041 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;39.335 ;25.161 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 374 ;12.730 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;22.824 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 278 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1402 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 939 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1351 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 191 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 57 ; 0.204 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.202 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1182 ; 1.215 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1825 ; 1.612 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 806 ; 3.049 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 708 ; 4.641 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28702 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.85900 REMARK 200 R SYM FOR SHELL (I) : 0.85900 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.3 M AMMONIUM ACETATE, REMARK 280 0.2 M SODIUM CITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 43.66250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 83.60650 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 43.66250 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 83.60650 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 43.66250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 83.60650 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 43.66250 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 83.60650 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 43.66250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 83.60650 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 43.66250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 83.60650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 43.66250 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 83.60650 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 43.66250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 43.66250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 83.60650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 308 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 6 REMARK 465 GLU A 7 REMARK 465 ASP A 228 REMARK 465 TYR A 229 REMARK 465 ILE A 230 REMARK 465 GLU A 231 REMARK 465 LYS A 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 29 CE NZ REMARK 470 GLU A 147 CD OE1 OE2 REMARK 470 LYS A 151 CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 53 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 115 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 115 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 119 -59.63 -136.58 REMARK 500 REMARK 500 REMARK: NULL DBREF 2O8P A 7 232 UNP Q5CYG0 Q5CYG0_CRYPV 7 232 SEQADV 2O8P GLY A 6 UNP Q5CYG0 CLONING ARTIFACT SEQADV 2O8P MSE A 8 UNP Q5CYG0 MET 8 MODIFIED RESIDUE SEQADV 2O8P MSE A 30 UNP Q5CYG0 MET 30 MODIFIED RESIDUE SEQADV 2O8P MSE A 70 UNP Q5CYG0 MET 70 MODIFIED RESIDUE SEQADV 2O8P MSE A 195 UNP Q5CYG0 MET 195 MODIFIED RESIDUE SEQADV 2O8P MSE A 213 UNP Q5CYG0 MET 213 MODIFIED RESIDUE SEQRES 1 A 227 GLY GLU MSE ASP GLU ARG LEU LEU GLN LYS TYR ARG ALA SEQRES 2 A 227 GLN VAL PHE GLU TRP GLY GLY CYS PHE ASP LYS MSE PHE SEQRES 3 A 227 GLU ALA LEU LYS SER LEU ILE TYR LEU SER GLU PHE GLU SEQRES 4 A 227 ASN SER GLU PHE ASP ASP GLU GLU ARG HIS LEU LEU THR SEQRES 5 A 227 LEU CYS ILE LYS HIS LYS ILE SER ASP TYR ARG THR MSE SEQRES 6 A 227 THR SER GLN VAL LEU GLN GLU GLN THR LYS GLN LEU ASN SEQRES 7 A 227 ASN ASP GLU LEU VAL LYS ILE CYS SER GLU TYR VAL PHE SEQRES 8 A 227 SER LEU ARG LYS ASP ILE LYS ALA PHE LEU GLN SER PHE SEQRES 9 A 227 GLU ASP CYS VAL ASP ARG LEU VAL GLU LYS SER PHE PHE SEQRES 10 A 227 SER LYS PHE PHE LYS LEU LYS VAL LYS SER ASP ILE SER SEQRES 11 A 227 ARG TYR LYS LEU GLU PHE GLY LEU CYS SER LEU GLU ASP SEQRES 12 A 227 SER LYS LYS ILE HIS GLN ASP ALA PHE THR LEU LEU CYS SEQRES 13 A 227 GLU HIS PRO ASP LYS ILE GLU GLN LEU PRO LEU GLY PHE SEQRES 14 A 227 ILE GLN ASN LEU ALA TYR ILE LEU SER GLU LYS TYR GLY SEQRES 15 A 227 GLU LYS LYS GLN VAL PHE ASN MSE LEU ASN SER LEU GLY SEQRES 16 A 227 LYS ILE LEU GLU LEU GLN ILE LYS GLU GLN GLU ASN MSE SEQRES 17 A 227 ASP ARG LYS ALA GLN ILE THR VAL TYR LEU GLN GLY ILE SEQRES 18 A 227 LYS ASP TYR ILE GLU LYS MODRES 2O8P MSE A 8 MET SELENOMETHIONINE MODRES 2O8P MSE A 30 MET SELENOMETHIONINE MODRES 2O8P MSE A 70 MET SELENOMETHIONINE MODRES 2O8P MSE A 195 MET SELENOMETHIONINE MODRES 2O8P MSE A 213 MET SELENOMETHIONINE HET MSE A 8 8 HET MSE A 30 8 HET MSE A 70 8 HET MSE A 195 16 HET MSE A 213 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 HOH *235(H2 O) HELIX 1 1 ASP A 9 GLY A 24 1 16 HELIX 2 2 CYS A 26 ASN A 45 1 20 HELIX 3 3 ASP A 49 GLN A 81 1 33 HELIX 4 4 ASN A 84 ARG A 115 1 32 HELIX 5 5 SER A 120 PHE A 141 1 22 HELIX 6 6 SER A 145 HIS A 163 1 19 HELIX 7 7 PRO A 164 LEU A 170 5 7 HELIX 8 8 PRO A 171 LYS A 185 1 15 HELIX 9 9 GLU A 188 GLN A 210 1 23 HELIX 10 10 ASN A 212 LYS A 227 1 16 LINK C MSE A 8 N ASP A 9 1555 1555 1.33 LINK C LYS A 29 N MSE A 30 1555 1555 1.33 LINK C MSE A 30 N PHE A 31 1555 1555 1.34 LINK C THR A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N BTHR A 71 1555 1555 1.33 LINK C MSE A 70 N ATHR A 71 1555 1555 1.34 LINK C ASN A 194 N BMSE A 195 1555 1555 1.33 LINK C ASN A 194 N AMSE A 195 1555 1555 1.33 LINK C BMSE A 195 N LEU A 196 1555 1555 1.33 LINK C AMSE A 195 N LEU A 196 1555 1555 1.33 LINK C ASN A 212 N MSE A 213 1555 1555 1.33 LINK C MSE A 213 N ASP A 214 1555 1555 1.33 CRYST1 87.325 87.325 167.213 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011451 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011451 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005980 0.00000 HETATM 1 N MSE A 8 40.090 28.960 0.022 1.00 37.96 N HETATM 2 CA MSE A 8 40.005 27.584 0.615 1.00 38.15 C HETATM 3 C MSE A 8 41.365 26.984 1.008 1.00 34.63 C HETATM 4 O MSE A 8 42.217 26.699 0.145 1.00 36.17 O HETATM 5 CB MSE A 8 39.276 26.612 -0.327 1.00 38.28 C HETATM 6 CG MSE A 8 39.215 25.180 0.208 1.00 37.65 C HETATM 7 SE MSE A 8 38.237 24.047 -0.980 1.00 47.70 SE HETATM 8 CE MSE A 8 39.756 23.537 -2.192 1.00 43.14 C