HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-DEC-06 2O8S TITLE X-RAY CRYSTAL STRUCTURE OF PROTEIN AGR_C_984 FROM AGROBACTERIUM TITLE 2 TUMEFACIENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ATR120. COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGR_C_984P; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: STR. C58; SOURCE 5 GENE: LOCUS_TAG="AGR_C_984"; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET21; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BL21 KEYWDS ALL ALPHA-HELICAL PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.SEETHARAMAN,F.FOROUHAR,M.SU,L.ZHAO,K.CUNNINGHAM,L.-C.MA,H.JANJUA, AUTHOR 2 R.XIAO,J.LIU,M.C.BARAN,T.B.ACTON,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 27-DEC-23 2O8S 1 REMARK SEQADV REVDAT 5 14-AUG-19 2O8S 1 REMARK REVDAT 4 24-JUL-19 2O8S 1 REMARK LINK REVDAT 3 13-JUL-11 2O8S 1 VERSN REVDAT 2 24-FEB-09 2O8S 1 VERSN REVDAT 1 30-JAN-07 2O8S 0 JRNL AUTH J.SEETHARAMAN,F.FOROUHAR,M.SU,L.ZHAO,K.CUNNINGHAM,L.-C.MA, JRNL AUTH 2 H.JANJUA,R.XIAO,J.LIU,M.C.BARAN,T.B.ACTON,G.T.MONTELIONE, JRNL AUTH 3 J.F.HUNT,L.TONG JRNL TITL CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN AGR_C_984 FROM JRNL TITL 2 AGROBACTERIUM TUMEFACIENS, NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 TARGET ATR120. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.4 REMARK 3 NUMBER OF REFLECTIONS : 37514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3476 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.49 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1647 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3592 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.94900 REMARK 3 B22 (A**2) : -3.94900 REMARK 3 B33 (A**2) : 7.89800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.59 REMARK 3 ESD FROM SIGMAA (A) : 0.81 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.59 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.69 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE STRUCTURE FACTORS ARE TWINNED. TWINNING OPERATOR : H, -K, -L, REMARK 3 TWINNING FRACTION : 0.459 REMARK 3 WATERS PICKED AT LEVEL GREATER THAN 3.0 REMARK 4 REMARK 4 2O8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS. REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46946 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.76000 REMARK 200 R SYM (I) : 0.58000 REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : 0.32500 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM CAPS, 40% PEG1K, 100MM AMMONIUM REMARK 280 SULFATE, 5MM DTT, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K, PH 10 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 166.40200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 249.60300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.20100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 CYS A 4 REMARK 465 LEU A 5 REMARK 465 GLU A 6 REMARK 465 ASN A 7 REMARK 465 VAL A 8 REMARK 465 ALA A 9 REMARK 465 CYS A 10 REMARK 465 VAL A 11 REMARK 465 ASN A 12 REMARK 465 LEU A 13 REMARK 465 SER A 14 REMARK 465 ALA A 15 REMARK 465 MSE A 16 REMARK 465 PRO A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 GLN A 30 REMARK 465 ALA A 31 REMARK 465 ALA A 32 REMARK 465 THR A 33 REMARK 465 LEU A 34 REMARK 465 CYS A 35 REMARK 465 ARG A 36 REMARK 465 GLN A 37 REMARK 465 GLY A 38 REMARK 465 ARG A 39 REMARK 465 THR A 40 REMARK 465 CYS A 41 REMARK 465 ALA A 42 REMARK 465 LEU A 43 REMARK 465 LYS A 44 REMARK 465 SER A 45 REMARK 465 GLY A 46 REMARK 465 SER A 47 REMARK 465 ASN A 48 REMARK 465 GLU A 49 REMARK 465 SER A 50 REMARK 465 GLY A 51 REMARK 465 GLY A 52 REMARK 465 SER A 53 REMARK 465 PRO A 232 REMARK 465 ASP A 233 REMARK 465 ALA A 234 REMARK 465 PHE A 235 REMARK 465 ALA A 236 REMARK 465 SER A 279 REMARK 465 THR A 280 REMARK 465 THR A 281 REMARK 465 TYR A 282 REMARK 465 ASP A 283 REMARK 465 PRO A 284 REMARK 465 LEU A 285 REMARK 465 ALA A 286 REMARK 465 VAL A 287 REMARK 465 PHE A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 SER A 291 REMARK 465 SER A 292 REMARK 465 GLY A 293 REMARK 465 TYR A 294 REMARK 465 GLY A 295 REMARK 465 ILE A 296 REMARK 465 SER A 297 REMARK 465 PRO A 298 REMARK 465 ASP A 299 REMARK 465 LEU A 300 REMARK 465 LEU A 301 REMARK 465 ILE A 302 REMARK 465 SER A 303 REMARK 465 ILE A 304 REMARK 465 ASN A 305 REMARK 465 SER A 306 REMARK 465 LEU A 307 REMARK 465 LYS A 308 REMARK 465 LEU A 309 REMARK 465 GLY A 310 REMARK 465 GLY A 311 REMARK 465 LYS A 312 REMARK 465 ALA A 313 REMARK 465 ALA A 314 REMARK 465 ALA A 315 REMARK 465 LEU A 316 REMARK 465 GLU A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 PRO B 3 REMARK 465 CYS B 4 REMARK 465 LEU B 5 REMARK 465 GLU B 6 REMARK 465 ASN B 7 REMARK 465 VAL B 8 REMARK 465 ALA B 9 REMARK 465 CYS B 10 REMARK 465 VAL B 11 REMARK 465 ASN B 12 REMARK 465 LEU B 13 REMARK 465 SER B 14 REMARK 465 ALA B 15 REMARK 465 MSE B 16 REMARK 465 PRO B 17 REMARK 465 PRO B 18 REMARK 465 ALA B 19 REMARK 465 GLN B 30 REMARK 465 ALA B 31 REMARK 465 ALA B 32 REMARK 465 THR B 33 REMARK 465 LEU B 34 REMARK 465 CYS B 35 REMARK 465 ARG B 36 REMARK 465 GLN B 37 REMARK 465 GLY B 38 REMARK 465 ARG B 39 REMARK 465 THR B 40 REMARK 465 CYS B 41 REMARK 465 ALA B 42 REMARK 465 LEU B 43 REMARK 465 LYS B 44 REMARK 465 SER B 45 REMARK 465 GLY B 46 REMARK 465 SER B 47 REMARK 465 ASN B 48 REMARK 465 GLU B 49 REMARK 465 SER B 50 REMARK 465 GLY B 51 REMARK 465 GLY B 52 REMARK 465 SER B 53 REMARK 465 PRO B 232 REMARK 465 ASP B 233 REMARK 465 ALA B 234 REMARK 465 PHE B 235 REMARK 465 ALA B 236 REMARK 465 SER B 279 REMARK 465 THR B 280 REMARK 465 THR B 281 REMARK 465 TYR B 282 REMARK 465 ASP B 283 REMARK 465 PRO B 284 REMARK 465 LEU B 285 REMARK 465 ALA B 286 REMARK 465 VAL B 287 REMARK 465 PHE B 288 REMARK 465 GLY B 289 REMARK 465 SER B 290 REMARK 465 SER B 291 REMARK 465 SER B 292 REMARK 465 GLY B 293 REMARK 465 TYR B 294 REMARK 465 GLY B 295 REMARK 465 ILE B 296 REMARK 465 SER B 297 REMARK 465 PRO B 298 REMARK 465 ASP B 299 REMARK 465 LEU B 300 REMARK 465 LEU B 301 REMARK 465 ILE B 302 REMARK 465 SER B 303 REMARK 465 ILE B 304 REMARK 465 ASN B 305 REMARK 465 SER B 306 REMARK 465 LEU B 307 REMARK 465 LYS B 308 REMARK 465 LEU B 309 REMARK 465 GLY B 310 REMARK 465 GLY B 311 REMARK 465 LYS B 312 REMARK 465 ALA B 313 REMARK 465 ALA B 314 REMARK 465 ALA B 315 REMARK 465 LEU B 316 REMARK 465 GLU B 317 REMARK 465 HIS B 318 REMARK 465 HIS B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 HIS B 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 214 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 22 126.38 -28.97 REMARK 500 PRO A 25 103.21 -53.61 REMARK 500 SER A 27 114.63 -24.54 REMARK 500 HIS A 28 -71.33 -115.78 REMARK 500 THR A 55 -5.59 79.75 REMARK 500 THR A 59 -71.54 -57.14 REMARK 500 TYR A 61 -70.30 -46.58 REMARK 500 GLN A 66 -81.26 -60.67 REMARK 500 LEU A 117 35.69 -84.33 REMARK 500 ALA A 168 43.92 -104.92 REMARK 500 LYS A 173 -80.60 -99.43 REMARK 500 ASP A 192 -70.16 -94.39 REMARK 500 THR A 208 -26.28 -35.63 REMARK 500 LYS A 210 -2.24 -145.65 REMARK 500 ASN A 230 97.06 37.63 REMARK 500 ILE A 251 143.84 -176.72 REMARK 500 LEU A 256 17.82 -67.47 REMARK 500 PRO A 259 15.92 -67.54 REMARK 500 GLU A 274 -8.47 -54.76 REMARK 500 PRO B 23 -157.64 -63.32 REMARK 500 GLN B 24 149.15 163.65 REMARK 500 HIS B 28 -68.61 -139.99 REMARK 500 THR B 55 -5.52 79.96 REMARK 500 THR B 59 -71.19 -57.74 REMARK 500 GLN B 66 -81.38 -60.81 REMARK 500 LEU B 117 35.57 -83.87 REMARK 500 ALA B 168 42.00 -105.57 REMARK 500 LYS B 173 -79.46 -100.34 REMARK 500 ASP B 192 -70.24 -93.38 REMARK 500 THR B 208 -26.14 -35.78 REMARK 500 LYS B 210 -2.92 -145.13 REMARK 500 ASN B 230 96.86 37.65 REMARK 500 ILE B 251 143.34 -176.68 REMARK 500 LEU B 256 17.92 -67.15 REMARK 500 PRO B 259 16.10 -67.77 REMARK 500 GLU B 274 -8.51 -54.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ATR120 RELATED DB: TARGETDB DBREF 2O8S A 1 312 UNP Q7D182 Q7D182_AGRT5 1 312 DBREF 2O8S B 1 312 UNP Q7D182 Q7D182_AGRT5 1 312 SEQADV 2O8S MSE A 1 UNP Q7D182 MET 1 MODIFIED RESIDUE SEQADV 2O8S MSE A 16 UNP Q7D182 MET 16 MODIFIED RESIDUE SEQADV 2O8S MSE A 102 UNP Q7D182 MET 102 MODIFIED RESIDUE SEQADV 2O8S MSE A 120 UNP Q7D182 MET 120 MODIFIED RESIDUE SEQADV 2O8S MSE A 272 UNP Q7D182 MET 272 MODIFIED RESIDUE SEQADV 2O8S MSE A 275 UNP Q7D182 MET 275 MODIFIED RESIDUE SEQADV 2O8S ALA A 313 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S ALA A 314 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S ALA A 315 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S LEU A 316 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S GLU A 317 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S HIS A 318 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS A 319 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS A 320 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS A 321 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS A 322 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS A 323 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S MSE B 1 UNP Q7D182 MET 1 MODIFIED RESIDUE SEQADV 2O8S MSE B 16 UNP Q7D182 MET 16 MODIFIED RESIDUE SEQADV 2O8S MSE B 102 UNP Q7D182 MET 102 MODIFIED RESIDUE SEQADV 2O8S MSE B 120 UNP Q7D182 MET 120 MODIFIED RESIDUE SEQADV 2O8S MSE B 272 UNP Q7D182 MET 272 MODIFIED RESIDUE SEQADV 2O8S MSE B 275 UNP Q7D182 MET 275 MODIFIED RESIDUE SEQADV 2O8S ALA B 313 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S ALA B 314 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S ALA B 315 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S LEU B 316 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S GLU B 317 UNP Q7D182 CLONING ARTIFACT SEQADV 2O8S HIS B 318 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS B 319 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS B 320 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS B 321 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS B 322 UNP Q7D182 EXPRESSION TAG SEQADV 2O8S HIS B 323 UNP Q7D182 EXPRESSION TAG SEQRES 1 A 323 MSE ALA PRO CYS LEU GLU ASN VAL ALA CYS VAL ASN LEU SEQRES 2 A 323 SER ALA MSE PRO PRO ALA PRO PRO SER PRO GLN PRO VAL SEQRES 3 A 323 SER HIS LYS GLN ALA ALA THR LEU CYS ARG GLN GLY ARG SEQRES 4 A 323 THR CYS ALA LEU LYS SER GLY SER ASN GLU SER GLY GLY SEQRES 5 A 323 SER VAL THR SER THR TYR THR SER TYR ARG LEU ILE SER SEQRES 6 A 323 GLN ASP ILE GLY LYS SER LEU GLU ARG VAL SER LYS GLN SEQRES 7 A 323 PRO ASP VAL ALA ARG GLU THR GLU TYR TYR ARG GLU LYS SEQRES 8 A 323 ILE GLY SER VAL LYS SER ILE ASP ASP PHE MSE ALA ASP SEQRES 9 A 323 THR ARG LEU TYR ASN TYR ALA LEU LYS ALA HIS GLY LEU SEQRES 10 A 323 GLU ASP MSE ALA TYR ALA LYS ALA PHE ILE ARG LYS VAL SEQRES 11 A 323 LEU THR GLU GLY ALA SER ASP LYS ASN ALA PHE ALA ASN SEQRES 12 A 323 LYS LEU SER ASP ASN ARG TYR ALA GLU LEU ALA LYS SER SEQRES 13 A 323 LEU ASP PHE ALA GLY LEU GLY ALA ALA ALA THR ALA THR SEQRES 14 A 323 GLU ALA ALA LYS SER GLY VAL ILE GLY ASN TYR ALA ARG SEQRES 15 A 323 GLN THR LEU GLU GLN GLU ALA GLY ASP ASP ASN ASN GLY SEQRES 16 A 323 VAL ARG LEU ALA LEU TYR PHE GLU ARG LYS ALA PRO THR SEQRES 17 A 323 ILE LYS SER GLY LEU ASP PHE LEU ALA ASP ASP ALA LEU SEQRES 18 A 323 ALA GLN VAL PHE ARG THR THR PHE ASN LEU PRO ASP ALA SEQRES 19 A 323 PHE ALA ALA ALA ASP VAL ASP LYS GLN ALA ALA LEU ILE SEQRES 20 A 323 GLU LYS SER ILE ASN ILE LYS ASP LEU GLN ASP PRO GLU SEQRES 21 A 323 LYS VAL GLY LYS LEU LEU GLU ARG PHE THR ILE MSE TRP SEQRES 22 A 323 GLU MSE GLN ASN PRO SER THR THR TYR ASP PRO LEU ALA SEQRES 23 A 323 VAL PHE GLY SER SER SER GLY TYR GLY ILE SER PRO ASP SEQRES 24 A 323 LEU LEU ILE SER ILE ASN SER LEU LYS LEU GLY GLY LYS SEQRES 25 A 323 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 323 MSE ALA PRO CYS LEU GLU ASN VAL ALA CYS VAL ASN LEU SEQRES 2 B 323 SER ALA MSE PRO PRO ALA PRO PRO SER PRO GLN PRO VAL SEQRES 3 B 323 SER HIS LYS GLN ALA ALA THR LEU CYS ARG GLN GLY ARG SEQRES 4 B 323 THR CYS ALA LEU LYS SER GLY SER ASN GLU SER GLY GLY SEQRES 5 B 323 SER VAL THR SER THR TYR THR SER TYR ARG LEU ILE SER SEQRES 6 B 323 GLN ASP ILE GLY LYS SER LEU GLU ARG VAL SER LYS GLN SEQRES 7 B 323 PRO ASP VAL ALA ARG GLU THR GLU TYR TYR ARG GLU LYS SEQRES 8 B 323 ILE GLY SER VAL LYS SER ILE ASP ASP PHE MSE ALA ASP SEQRES 9 B 323 THR ARG LEU TYR ASN TYR ALA LEU LYS ALA HIS GLY LEU SEQRES 10 B 323 GLU ASP MSE ALA TYR ALA LYS ALA PHE ILE ARG LYS VAL SEQRES 11 B 323 LEU THR GLU GLY ALA SER ASP LYS ASN ALA PHE ALA ASN SEQRES 12 B 323 LYS LEU SER ASP ASN ARG TYR ALA GLU LEU ALA LYS SER SEQRES 13 B 323 LEU ASP PHE ALA GLY LEU GLY ALA ALA ALA THR ALA THR SEQRES 14 B 323 GLU ALA ALA LYS SER GLY VAL ILE GLY ASN TYR ALA ARG SEQRES 15 B 323 GLN THR LEU GLU GLN GLU ALA GLY ASP ASP ASN ASN GLY SEQRES 16 B 323 VAL ARG LEU ALA LEU TYR PHE GLU ARG LYS ALA PRO THR SEQRES 17 B 323 ILE LYS SER GLY LEU ASP PHE LEU ALA ASP ASP ALA LEU SEQRES 18 B 323 ALA GLN VAL PHE ARG THR THR PHE ASN LEU PRO ASP ALA SEQRES 19 B 323 PHE ALA ALA ALA ASP VAL ASP LYS GLN ALA ALA LEU ILE SEQRES 20 B 323 GLU LYS SER ILE ASN ILE LYS ASP LEU GLN ASP PRO GLU SEQRES 21 B 323 LYS VAL GLY LYS LEU LEU GLU ARG PHE THR ILE MSE TRP SEQRES 22 B 323 GLU MSE GLN ASN PRO SER THR THR TYR ASP PRO LEU ALA SEQRES 23 B 323 VAL PHE GLY SER SER SER GLY TYR GLY ILE SER PRO ASP SEQRES 24 B 323 LEU LEU ILE SER ILE ASN SER LEU LYS LEU GLY GLY LYS SEQRES 25 B 323 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS MODRES 2O8S MSE A 102 MET SELENOMETHIONINE MODRES 2O8S MSE A 120 MET SELENOMETHIONINE MODRES 2O8S MSE A 272 MET SELENOMETHIONINE MODRES 2O8S MSE A 275 MET SELENOMETHIONINE MODRES 2O8S MSE B 102 MET SELENOMETHIONINE MODRES 2O8S MSE B 120 MET SELENOMETHIONINE MODRES 2O8S MSE B 272 MET SELENOMETHIONINE MODRES 2O8S MSE B 275 MET SELENOMETHIONINE HET MSE A 102 8 HET MSE A 120 8 HET MSE A 272 8 HET MSE A 275 8 HET MSE B 102 8 HET MSE B 120 8 HET MSE B 272 8 HET MSE B 275 8 HET SO4 A 401 5 HET SO4 B 401 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *48(H2 O) HELIX 1 1 THR A 55 ASP A 67 1 13 HELIX 2 2 ASP A 67 SER A 76 1 10 HELIX 3 3 GLN A 78 ILE A 92 1 15 HELIX 4 4 GLY A 93 VAL A 95 5 3 HELIX 5 5 SER A 97 ALA A 103 1 7 HELIX 6 6 ASP A 104 HIS A 115 1 12 HELIX 7 7 GLY A 116 MSE A 120 5 5 HELIX 8 8 ALA A 123 GLY A 134 1 12 HELIX 9 9 ALA A 140 LEU A 145 5 6 HELIX 10 10 ASN A 148 LEU A 157 1 10 HELIX 11 11 ASP A 158 GLY A 163 1 6 HELIX 12 12 ALA A 164 ALA A 166 5 3 HELIX 13 13 LYS A 173 ASP A 191 1 19 HELIX 14 14 ASN A 193 ALA A 206 1 14 HELIX 15 15 SER A 211 ALA A 217 1 7 HELIX 16 16 ASP A 218 THR A 227 1 10 HELIX 17 17 LYS A 242 SER A 250 1 9 HELIX 18 18 GLU A 260 ASN A 277 1 18 HELIX 19 19 THR B 55 ASP B 67 1 13 HELIX 20 20 ASP B 67 SER B 76 1 10 HELIX 21 21 GLN B 78 ILE B 92 1 15 HELIX 22 22 GLY B 93 VAL B 95 5 3 HELIX 23 23 SER B 97 ALA B 103 1 7 HELIX 24 24 ASP B 104 HIS B 115 1 12 HELIX 25 25 GLY B 116 MSE B 120 5 5 HELIX 26 26 ALA B 123 GLY B 134 1 12 HELIX 27 27 ALA B 140 LEU B 145 5 6 HELIX 28 28 ASN B 148 LEU B 157 1 10 HELIX 29 29 ASP B 158 GLY B 163 1 6 HELIX 30 30 ALA B 164 THR B 169 5 6 HELIX 31 31 LYS B 173 ASP B 191 1 19 HELIX 32 32 ASN B 193 ALA B 206 1 14 HELIX 33 33 SER B 211 ALA B 217 1 7 HELIX 34 34 ASP B 218 THR B 227 1 10 HELIX 35 35 LYS B 242 SER B 250 1 9 HELIX 36 36 GLU B 260 ASN B 277 1 18 LINK C PHE A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N ALA A 103 1555 1555 1.33 LINK C ASP A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N ALA A 121 1555 1555 1.33 LINK C ILE A 271 N MSE A 272 1555 1555 1.32 LINK C MSE A 272 N TRP A 273 1555 1555 1.33 LINK C GLU A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N GLN A 276 1555 1555 1.33 LINK C PHE B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N ALA B 103 1555 1555 1.33 LINK C ASP B 119 N MSE B 120 1555 1555 1.32 LINK C MSE B 120 N ALA B 121 1555 1555 1.33 LINK C ILE B 271 N MSE B 272 1555 1555 1.33 LINK C MSE B 272 N TRP B 273 1555 1555 1.33 LINK C GLU B 274 N MSE B 275 1555 1555 1.33 LINK C MSE B 275 N GLN B 276 1555 1555 1.33 SITE 1 AC1 3 ALA A 125 SER B 136 ASP B 137 SITE 1 AC2 7 ALA A 160 GLY A 161 HOH A 415 TYR B 122 SITE 2 AC2 7 ALA B 123 LYS B 124 ALA B 125 CRYST1 42.490 42.490 332.804 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003005 0.00000