HEADER TRANSCRIPTION/DNA 13-DEC-06 2O93 TITLE CRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM KAPPAB TITLE 2 ENHANCER ELEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: KAPPAB ENHANCER ELEMENT, DNA 25-MER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: KAPPAB ENHANCER ELEMENT, DNA 25-MER; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2; COMPND 11 CHAIN: L, M, O; COMPND 12 FRAGMENT: RHR DOMAIN; COMPND 13 SYNONYM: T CELL TRANSCRIPTION FACTOR NFAT1; NFAT PRE-EXISTING COMPND 14 SUBUNIT; NF-ATP; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: NFATC2, NFAT1, NFATP; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PQE-30 KEYWDS IG DOMAIN; PROTEIN-DNA COMPLEX; DOUBLE HELIX, TRANSCRIPTION-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.L.BATES,L.CHEN REVDAT 4 30-AUG-23 2O93 1 SEQADV REVDAT 3 18-OCT-17 2O93 1 REMARK REVDAT 2 22-JUL-08 2O93 1 JRNL VERSN REVDAT 1 19-JUN-07 2O93 0 JRNL AUTH D.L.BATES,K.K.BARTHEL,Y.WU,R.KALHOR,J.C.STROUD,M.J.GIFFIN, JRNL AUTH 2 L.CHEN JRNL TITL CRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM JRNL TITL 2 KAPPAB ENHANCER ELEMENT JRNL REF STRUCTURE V. 16 684 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 18462673 JRNL DOI 10.1016/J.STR.2008.01.020 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 25518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2548 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 283 REMARK 3 BIN R VALUE (WORKING SET) : 0.4010 REMARK 3 BIN FREE R VALUE : 0.5130 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 42 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6847 REMARK 3 NUCLEIC ACID ATOMS : 1019 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -17.37000 REMARK 3 B22 (A**2) : 13.38700 REMARK 3 B33 (A**2) : 3.98300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.585 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.214 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.428 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.575 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 35.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2O93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26944 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1P7H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM HEPES PH 7.0, 15MM MAGNESIUM REMARK 280 ACETATE, 250MM AMMONIUM ACETATE, 7.5% PEG 4000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.84550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.61350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.64950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.61350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.84550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.64950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, L, M, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET L 378 REMARK 465 ARG L 379 REMARK 465 GLY L 380 REMARK 465 SER L 381 REMARK 465 HIS L 382 REMARK 465 HIS L 383 REMARK 465 HIS L 384 REMARK 465 HIS L 385 REMARK 465 HIS L 386 REMARK 465 HIS L 387 REMARK 465 THR L 388 REMARK 465 ALA L 389 REMARK 465 PRO L 390 REMARK 465 HIS L 391 REMARK 465 MET M 378 REMARK 465 ARG M 379 REMARK 465 GLY M 380 REMARK 465 SER M 381 REMARK 465 HIS M 382 REMARK 465 HIS M 383 REMARK 465 HIS M 384 REMARK 465 HIS M 385 REMARK 465 HIS M 386 REMARK 465 HIS M 387 REMARK 465 THR M 388 REMARK 465 ALA M 389 REMARK 465 PRO M 390 REMARK 465 HIS M 391 REMARK 465 ALA M 392 REMARK 465 SER M 393 REMARK 465 SER M 394 REMARK 465 MET O 378 REMARK 465 ARG O 379 REMARK 465 GLY O 380 REMARK 465 SER O 381 REMARK 465 HIS O 382 REMARK 465 HIS O 383 REMARK 465 HIS O 384 REMARK 465 HIS O 385 REMARK 465 HIS O 386 REMARK 465 HIS O 387 REMARK 465 THR O 388 REMARK 465 ALA O 389 REMARK 465 PRO O 390 REMARK 465 HIS O 391 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 10 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG A 16 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA B 18 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC B 23 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER L 393 58.55 -58.39 REMARK 500 PRO L 396 145.70 -36.15 REMARK 500 SER L 407 35.50 -95.34 REMARK 500 ALA L 463 64.67 -101.10 REMARK 500 LYS L 482 -119.11 -15.39 REMARK 500 THR L 483 -6.33 -49.87 REMARK 500 THR L 485 -85.54 -64.94 REMARK 500 LYS L 491 141.85 -171.77 REMARK 500 ASN L 508 38.65 77.51 REMARK 500 ASP L 514 19.31 -152.20 REMARK 500 LYS L 530 89.96 -64.62 REMARK 500 ARG L 537 -65.19 -6.80 REMARK 500 SER L 554 5.05 -63.11 REMARK 500 SER L 564 -170.16 -60.27 REMARK 500 GLN L 571 141.97 -31.85 REMARK 500 ARG L 572 -152.96 -64.00 REMARK 500 ALA L 574 164.05 -45.22 REMARK 500 GLU L 606 25.90 -79.79 REMARK 500 GLU L 613 123.28 -176.62 REMARK 500 GLU L 623 94.96 -168.36 REMARK 500 ARG L 665 -85.37 -97.11 REMARK 500 LYS L 666 102.26 -29.48 REMARK 500 SER M 407 31.94 -98.04 REMARK 500 HIS M 420 84.82 -168.88 REMARK 500 GLU M 450 175.28 -42.07 REMARK 500 ASP M 464 170.58 -46.45 REMARK 500 ARG M 466 148.60 -31.97 REMARK 500 LEU M 468 133.00 -34.58 REMARK 500 LYS M 482 -48.64 66.93 REMARK 500 THR M 483 -3.06 -168.98 REMARK 500 ILE M 513 103.26 -58.87 REMARK 500 ASP M 514 18.68 -142.03 REMARK 500 ARG M 537 135.66 -36.56 REMARK 500 LYS M 538 3.66 48.79 REMARK 500 SER M 553 5.10 -58.85 REMARK 500 SER M 573 136.59 -38.01 REMARK 500 CYS M 588 162.97 165.84 REMARK 500 GLN M 594 162.65 -38.22 REMARK 500 SER M 607 150.85 -46.22 REMARK 500 TRP M 622 129.09 -170.60 REMARK 500 ASP M 631 -79.68 -41.86 REMARK 500 SER M 633 131.81 -39.81 REMARK 500 LYS M 666 86.59 -41.06 REMARK 500 SER M 668 -163.87 -68.46 REMARK 500 PRO M 670 121.17 -36.50 REMARK 500 SER O 393 37.23 -77.93 REMARK 500 PRO O 396 130.53 -28.46 REMARK 500 GLN O 404 142.43 -178.83 REMARK 500 GLU O 450 -170.70 -49.67 REMARK 500 LYS O 482 -73.30 -74.58 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG A 3 0.05 SIDE CHAIN REMARK 500 DC B 15 0.07 SIDE CHAIN REMARK 500 DG B 16 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P7H RELATED DB: PDB REMARK 900 NFAT BOUND TO SINGLE KAPPAB ELEMENT DBREF 2O93 L 392 678 UNP Q13469 NFAC2_HUMAN 392 678 DBREF 2O93 M 392 678 UNP Q13469 NFAC2_HUMAN 392 678 DBREF 2O93 O 392 678 UNP Q13469 NFAC2_HUMAN 392 678 DBREF 2O93 A 1 25 PDB 2O93 2O93 1 25 DBREF 2O93 B 1 25 PDB 2O93 2O93 1 25 SEQADV 2O93 MET L 378 UNP Q13469 INITIATING METHIONINE SEQADV 2O93 ARG L 379 UNP Q13469 EXPRESSION TAG SEQADV 2O93 GLY L 380 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER L 381 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 382 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 383 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 384 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 385 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 386 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 387 UNP Q13469 EXPRESSION TAG SEQADV 2O93 THR L 388 UNP Q13469 EXPRESSION TAG SEQADV 2O93 ALA L 389 UNP Q13469 EXPRESSION TAG SEQADV 2O93 PRO L 390 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS L 391 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER L 394 UNP Q13469 LEU 394 CLONING ARTIFACT SEQADV 2O93 VAL L 395 UNP Q13469 PRO 395 CLONING ARTIFACT SEQADV 2O93 MET M 378 UNP Q13469 INITIATING METHIONINE SEQADV 2O93 ARG M 379 UNP Q13469 EXPRESSION TAG SEQADV 2O93 GLY M 380 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER M 381 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 382 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 383 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 384 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 385 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 386 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 387 UNP Q13469 EXPRESSION TAG SEQADV 2O93 THR M 388 UNP Q13469 EXPRESSION TAG SEQADV 2O93 ALA M 389 UNP Q13469 EXPRESSION TAG SEQADV 2O93 PRO M 390 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS M 391 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER M 394 UNP Q13469 LEU 394 CLONING ARTIFACT SEQADV 2O93 VAL M 395 UNP Q13469 PRO 395 CLONING ARTIFACT SEQADV 2O93 MET O 378 UNP Q13469 INITIATING METHIONINE SEQADV 2O93 ARG O 379 UNP Q13469 EXPRESSION TAG SEQADV 2O93 GLY O 380 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER O 381 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 382 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 383 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 384 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 385 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 386 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 387 UNP Q13469 EXPRESSION TAG SEQADV 2O93 THR O 388 UNP Q13469 EXPRESSION TAG SEQADV 2O93 ALA O 389 UNP Q13469 EXPRESSION TAG SEQADV 2O93 PRO O 390 UNP Q13469 EXPRESSION TAG SEQADV 2O93 HIS O 391 UNP Q13469 EXPRESSION TAG SEQADV 2O93 SER O 394 UNP Q13469 LEU 394 CLONING ARTIFACT SEQADV 2O93 VAL O 395 UNP Q13469 PRO 395 CLONING ARTIFACT SEQRES 1 A 25 DA DG DG DG DA DC DT DT DT DC DC DG DC SEQRES 2 A 25 DT DG DG DG DG DA DC DT DT DT DC DC SEQRES 1 B 25 DT DG DG DA DA DA DG DT DC DC DC DC DA SEQRES 2 B 25 DG DC DG DG DA DA DA DG DT DC DC DC SEQRES 1 L 301 MET ARG GLY SER HIS HIS HIS HIS HIS HIS THR ALA PRO SEQRES 2 L 301 HIS ALA SER SER VAL PRO LEU GLU TRP PRO LEU SER SER SEQRES 3 L 301 GLN SER GLY SER TYR GLU LEU ARG ILE GLU VAL GLN PRO SEQRES 4 L 301 LYS PRO HIS HIS ARG ALA HIS TYR GLU THR GLU GLY SER SEQRES 5 L 301 ARG GLY ALA VAL LYS ALA PRO THR GLY GLY HIS PRO VAL SEQRES 6 L 301 VAL GLN LEU HIS GLY TYR MET GLU ASN LYS PRO LEU GLY SEQRES 7 L 301 LEU GLN ILE PHE ILE GLY THR ALA ASP GLU ARG ILE LEU SEQRES 8 L 301 LYS PRO HIS ALA PHE TYR GLN VAL HIS ARG ILE THR GLY SEQRES 9 L 301 LYS THR VAL THR THR THR SER TYR GLU LYS ILE VAL GLY SEQRES 10 L 301 ASN THR LYS VAL LEU GLU ILE PRO LEU GLU PRO LYS ASN SEQRES 11 L 301 ASN MET ARG ALA THR ILE ASP CYS ALA GLY ILE LEU LYS SEQRES 12 L 301 LEU ARG ASN ALA ASP ILE GLU LEU ARG LYS GLY GLU THR SEQRES 13 L 301 ASP ILE GLY ARG LYS ASN THR ARG VAL ARG LEU VAL PHE SEQRES 14 L 301 ARG VAL HIS ILE PRO GLU SER SER GLY ARG ILE VAL SER SEQRES 15 L 301 LEU GLN THR ALA SER ASN PRO ILE GLU CYS SER GLN ARG SEQRES 16 L 301 SER ALA HIS GLU LEU PRO MET VAL GLU ARG GLN ASP THR SEQRES 17 L 301 ASP SER CYS LEU VAL TYR GLY GLY GLN GLN MET ILE LEU SEQRES 18 L 301 THR GLY GLN ASN PHE THR SER GLU SER LYS VAL VAL PHE SEQRES 19 L 301 THR GLU LYS THR THR ASP GLY GLN GLN ILE TRP GLU MET SEQRES 20 L 301 GLU ALA THR VAL ASP LYS ASP LYS SER GLN PRO ASN MET SEQRES 21 L 301 LEU PHE VAL GLU ILE PRO GLU TYR ARG ASN LYS HIS ILE SEQRES 22 L 301 ARG THR PRO VAL LYS VAL ASN PHE TYR VAL ILE ASN GLY SEQRES 23 L 301 LYS ARG LYS ARG SER GLN PRO GLN HIS PHE THR TYR HIS SEQRES 24 L 301 PRO VAL SEQRES 1 M 301 MET ARG GLY SER HIS HIS HIS HIS HIS HIS THR ALA PRO SEQRES 2 M 301 HIS ALA SER SER VAL PRO LEU GLU TRP PRO LEU SER SER SEQRES 3 M 301 GLN SER GLY SER TYR GLU LEU ARG ILE GLU VAL GLN PRO SEQRES 4 M 301 LYS PRO HIS HIS ARG ALA HIS TYR GLU THR GLU GLY SER SEQRES 5 M 301 ARG GLY ALA VAL LYS ALA PRO THR GLY GLY HIS PRO VAL SEQRES 6 M 301 VAL GLN LEU HIS GLY TYR MET GLU ASN LYS PRO LEU GLY SEQRES 7 M 301 LEU GLN ILE PHE ILE GLY THR ALA ASP GLU ARG ILE LEU SEQRES 8 M 301 LYS PRO HIS ALA PHE TYR GLN VAL HIS ARG ILE THR GLY SEQRES 9 M 301 LYS THR VAL THR THR THR SER TYR GLU LYS ILE VAL GLY SEQRES 10 M 301 ASN THR LYS VAL LEU GLU ILE PRO LEU GLU PRO LYS ASN SEQRES 11 M 301 ASN MET ARG ALA THR ILE ASP CYS ALA GLY ILE LEU LYS SEQRES 12 M 301 LEU ARG ASN ALA ASP ILE GLU LEU ARG LYS GLY GLU THR SEQRES 13 M 301 ASP ILE GLY ARG LYS ASN THR ARG VAL ARG LEU VAL PHE SEQRES 14 M 301 ARG VAL HIS ILE PRO GLU SER SER GLY ARG ILE VAL SER SEQRES 15 M 301 LEU GLN THR ALA SER ASN PRO ILE GLU CYS SER GLN ARG SEQRES 16 M 301 SER ALA HIS GLU LEU PRO MET VAL GLU ARG GLN ASP THR SEQRES 17 M 301 ASP SER CYS LEU VAL TYR GLY GLY GLN GLN MET ILE LEU SEQRES 18 M 301 THR GLY GLN ASN PHE THR SER GLU SER LYS VAL VAL PHE SEQRES 19 M 301 THR GLU LYS THR THR ASP GLY GLN GLN ILE TRP GLU MET SEQRES 20 M 301 GLU ALA THR VAL ASP LYS ASP LYS SER GLN PRO ASN MET SEQRES 21 M 301 LEU PHE VAL GLU ILE PRO GLU TYR ARG ASN LYS HIS ILE SEQRES 22 M 301 ARG THR PRO VAL LYS VAL ASN PHE TYR VAL ILE ASN GLY SEQRES 23 M 301 LYS ARG LYS ARG SER GLN PRO GLN HIS PHE THR TYR HIS SEQRES 24 M 301 PRO VAL SEQRES 1 O 301 MET ARG GLY SER HIS HIS HIS HIS HIS HIS THR ALA PRO SEQRES 2 O 301 HIS ALA SER SER VAL PRO LEU GLU TRP PRO LEU SER SER SEQRES 3 O 301 GLN SER GLY SER TYR GLU LEU ARG ILE GLU VAL GLN PRO SEQRES 4 O 301 LYS PRO HIS HIS ARG ALA HIS TYR GLU THR GLU GLY SER SEQRES 5 O 301 ARG GLY ALA VAL LYS ALA PRO THR GLY GLY HIS PRO VAL SEQRES 6 O 301 VAL GLN LEU HIS GLY TYR MET GLU ASN LYS PRO LEU GLY SEQRES 7 O 301 LEU GLN ILE PHE ILE GLY THR ALA ASP GLU ARG ILE LEU SEQRES 8 O 301 LYS PRO HIS ALA PHE TYR GLN VAL HIS ARG ILE THR GLY SEQRES 9 O 301 LYS THR VAL THR THR THR SER TYR GLU LYS ILE VAL GLY SEQRES 10 O 301 ASN THR LYS VAL LEU GLU ILE PRO LEU GLU PRO LYS ASN SEQRES 11 O 301 ASN MET ARG ALA THR ILE ASP CYS ALA GLY ILE LEU LYS SEQRES 12 O 301 LEU ARG ASN ALA ASP ILE GLU LEU ARG LYS GLY GLU THR SEQRES 13 O 301 ASP ILE GLY ARG LYS ASN THR ARG VAL ARG LEU VAL PHE SEQRES 14 O 301 ARG VAL HIS ILE PRO GLU SER SER GLY ARG ILE VAL SER SEQRES 15 O 301 LEU GLN THR ALA SER ASN PRO ILE GLU CYS SER GLN ARG SEQRES 16 O 301 SER ALA HIS GLU LEU PRO MET VAL GLU ARG GLN ASP THR SEQRES 17 O 301 ASP SER CYS LEU VAL TYR GLY GLY GLN GLN MET ILE LEU SEQRES 18 O 301 THR GLY GLN ASN PHE THR SER GLU SER LYS VAL VAL PHE SEQRES 19 O 301 THR GLU LYS THR THR ASP GLY GLN GLN ILE TRP GLU MET SEQRES 20 O 301 GLU ALA THR VAL ASP LYS ASP LYS SER GLN PRO ASN MET SEQRES 21 O 301 LEU PHE VAL GLU ILE PRO GLU TYR ARG ASN LYS HIS ILE SEQRES 22 O 301 ARG THR PRO VAL LYS VAL ASN PHE TYR VAL ILE ASN GLY SEQRES 23 O 301 LYS ARG LYS ARG SER GLN PRO GLN HIS PHE THR TYR HIS SEQRES 24 O 301 PRO VAL HELIX 1 1 GLU L 504 ASN L 508 5 5 HELIX 2 2 ARG L 522 ARG L 529 1 8 HELIX 3 3 GLU M 504 ASN M 508 5 5 HELIX 4 4 ARG M 522 LEU M 528 1 7 HELIX 5 5 GLU O 504 ASN O 508 5 5 HELIX 6 6 ARG O 522 GLU O 527 1 6 HELIX 7 7 SER O 570 GLU O 576 1 7 SHEET 1 A 3 GLU L 409 VAL L 414 0 SHEET 2 A 3 VAL L 442 HIS L 446 -1 O HIS L 446 N GLU L 409 SHEET 3 A 3 ARG L 510 THR L 512 -1 O ALA L 511 N VAL L 443 SHEET 1 B 5 TYR L 489 VAL L 493 0 SHEET 2 B 5 THR L 496 LEU L 503 -1 O GLU L 500 N TYR L 489 SHEET 3 B 5 LEU L 454 THR L 462 -1 N LEU L 454 O LEU L 503 SHEET 4 B 5 ARG L 541 PRO L 551 -1 O ARG L 543 N GLY L 461 SHEET 5 B 5 ILE L 557 LEU L 560 -1 O LEU L 560 N VAL L 548 SHEET 1 C 5 TYR L 489 VAL L 493 0 SHEET 2 C 5 THR L 496 LEU L 503 -1 O GLU L 500 N TYR L 489 SHEET 3 C 5 LEU L 454 THR L 462 -1 N LEU L 454 O LEU L 503 SHEET 4 C 5 ARG L 541 PRO L 551 -1 O ARG L 543 N GLY L 461 SHEET 5 C 5 ILE L 567 GLU L 568 -1 O ILE L 567 N VAL L 542 SHEET 1 D 2 TYR L 474 ARG L 478 0 SHEET 2 D 2 ALA L 516 LYS L 520 -1 O GLY L 517 N HIS L 477 SHEET 1 E 8 MET L 579 GLN L 583 0 SHEET 2 E 8 GLN L 595 GLN L 601 -1 O THR L 599 N GLU L 581 SHEET 3 E 8 MET L 637 GLU L 641 -1 O VAL L 640 N MET L 596 SHEET 4 E 8 GLN L 620 VAL L 628 -1 N THR L 627 O GLU L 641 SHEET 5 E 8 SER L 607 LYS L 614 -1 N PHE L 611 O MET L 624 SHEET 6 E 8 VAL L 654 ASN L 662 -1 O TYR L 659 N VAL L 610 SHEET 7 E 8 GLN L 671 HIS L 676 -1 O PHE L 673 N VAL L 656 SHEET 8 E 8 SER L 587 LEU L 589 1 N CYS L 588 O HIS L 676 SHEET 1 F 4 GLN M 404 SER M 405 0 SHEET 2 F 4 TYR M 408 VAL M 414 -1 O TYR M 408 N SER M 405 SHEET 3 F 4 VAL M 442 HIS M 446 -1 O HIS M 446 N GLU M 409 SHEET 4 F 4 ARG M 510 ALA M 511 -1 O ALA M 511 N VAL M 443 SHEET 1 G 3 HIS M 423 TYR M 424 0 SHEET 2 G 3 ALA M 516 LYS M 520 1 O ILE M 518 N HIS M 423 SHEET 3 G 3 TYR M 474 ARG M 478 -1 N HIS M 477 O GLY M 517 SHEET 1 H 5 TYR M 489 VAL M 493 0 SHEET 2 H 5 THR M 496 LEU M 503 -1 O VAL M 498 N LYS M 491 SHEET 3 H 5 LEU M 454 GLY M 461 -1 N LEU M 456 O ILE M 501 SHEET 4 H 5 ARG M 541 PRO M 551 -1 O ARG M 547 N GLN M 457 SHEET 5 H 5 ILE M 557 LEU M 560 -1 O VAL M 558 N ILE M 550 SHEET 1 I 5 TYR M 489 VAL M 493 0 SHEET 2 I 5 THR M 496 LEU M 503 -1 O VAL M 498 N LYS M 491 SHEET 3 I 5 LEU M 454 GLY M 461 -1 N LEU M 456 O ILE M 501 SHEET 4 I 5 ARG M 541 PRO M 551 -1 O ARG M 547 N GLN M 457 SHEET 5 I 5 ILE M 567 GLU M 568 -1 O ILE M 567 N VAL M 542 SHEET 1 J 8 MET M 579 GLN M 583 0 SHEET 2 J 8 GLN M 595 GLN M 601 -1 O THR M 599 N ARG M 582 SHEET 3 J 8 MET M 637 GLU M 641 -1 O VAL M 640 N MET M 596 SHEET 4 J 8 GLN M 620 VAL M 628 -1 N THR M 627 O GLU M 641 SHEET 5 J 8 LYS M 608 LYS M 614 -1 N PHE M 611 O MET M 624 SHEET 6 J 8 VAL M 654 ILE M 661 -1 O ASN M 657 N THR M 612 SHEET 7 J 8 GLN M 671 HIS M 676 -1 O TYR M 675 N VAL M 654 SHEET 8 J 8 SER M 587 LEU M 589 1 N CYS M 588 O HIS M 676 SHEET 1 K 2 GLU O 409 VAL O 414 0 SHEET 2 K 2 VAL O 442 HIS O 446 -1 O HIS O 446 N GLU O 409 SHEET 1 L 5 TYR O 489 VAL O 493 0 SHEET 2 L 5 THR O 496 LEU O 503 -1 O VAL O 498 N LYS O 491 SHEET 3 L 5 LEU O 454 THR O 462 -1 N LEU O 454 O LEU O 503 SHEET 4 L 5 ARG O 541 PRO O 551 -1 O ARG O 543 N GLY O 461 SHEET 5 L 5 ILE O 557 LEU O 560 -1 O LEU O 560 N VAL O 548 SHEET 1 M 5 TYR O 489 VAL O 493 0 SHEET 2 M 5 THR O 496 LEU O 503 -1 O VAL O 498 N LYS O 491 SHEET 3 M 5 LEU O 454 THR O 462 -1 N LEU O 454 O LEU O 503 SHEET 4 M 5 ARG O 541 PRO O 551 -1 O ARG O 543 N GLY O 461 SHEET 5 M 5 ILE O 567 GLU O 568 -1 O ILE O 567 N VAL O 542 SHEET 1 N 2 TYR O 474 ARG O 478 0 SHEET 2 N 2 ALA O 516 LYS O 520 -1 O LEU O 519 N GLN O 475 SHEET 1 O 8 MET O 579 GLN O 583 0 SHEET 2 O 8 GLN O 595 GLN O 601 -1 O THR O 599 N ARG O 582 SHEET 3 O 8 MET O 637 GLU O 641 -1 O VAL O 640 N MET O 596 SHEET 4 O 8 GLN O 620 GLN O 634 -1 N GLN O 634 O MET O 637 SHEET 5 O 8 VAL O 609 LYS O 614 -1 N PHE O 611 O MET O 624 SHEET 6 O 8 VAL O 654 VAL O 660 -1 O ASN O 657 N THR O 612 SHEET 7 O 8 GLN O 671 HIS O 676 -1 O GLN O 671 N PHE O 658 SHEET 8 O 8 SER O 587 LEU O 589 1 N CYS O 588 O HIS O 676 CRYST1 93.691 95.299 159.227 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010673 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006280 0.00000