data_2OA2 # _entry.id 2OA2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OA2 pdb_00002oa2 10.2210/pdb2oa2/pdb RCSB RCSB040876 ? ? WWPDB D_1000040876 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 371834 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2OA2 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of BH2720 (10175341) from Bacillus halodurans at 1.41 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2OA2 _cell.length_a 68.610 _cell.length_b 68.610 _cell.length_c 60.106 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OA2 _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BH2720 protein' 17187.719 1 ? ? ? ? 2 water nat water 18.015 143 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSLHEEADHRVTDHGPRPFVVNIEDETKRNRAFRRALWTGDHLQVTL(MSE)SIQVGEDIGLEIHPHLDQFLRVEEGRGL VQ(MSE)GHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPPQHPHGTVHETKAIA(MSE)AAEEHHHL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSLHEEADHRVTDHGPRPFVVNIEDETKRNRAFRRALWTGDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMG HRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPPQHPHGTVHETKAIAMAAEEHHHL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 371834 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LEU n 1 4 HIS n 1 5 GLU n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 HIS n 1 10 ARG n 1 11 VAL n 1 12 THR n 1 13 ASP n 1 14 HIS n 1 15 GLY n 1 16 PRO n 1 17 ARG n 1 18 PRO n 1 19 PHE n 1 20 VAL n 1 21 VAL n 1 22 ASN n 1 23 ILE n 1 24 GLU n 1 25 ASP n 1 26 GLU n 1 27 THR n 1 28 LYS n 1 29 ARG n 1 30 ASN n 1 31 ARG n 1 32 ALA n 1 33 PHE n 1 34 ARG n 1 35 ARG n 1 36 ALA n 1 37 LEU n 1 38 TRP n 1 39 THR n 1 40 GLY n 1 41 ASP n 1 42 HIS n 1 43 LEU n 1 44 GLN n 1 45 VAL n 1 46 THR n 1 47 LEU n 1 48 MSE n 1 49 SER n 1 50 ILE n 1 51 GLN n 1 52 VAL n 1 53 GLY n 1 54 GLU n 1 55 ASP n 1 56 ILE n 1 57 GLY n 1 58 LEU n 1 59 GLU n 1 60 ILE n 1 61 HIS n 1 62 PRO n 1 63 HIS n 1 64 LEU n 1 65 ASP n 1 66 GLN n 1 67 PHE n 1 68 LEU n 1 69 ARG n 1 70 VAL n 1 71 GLU n 1 72 GLU n 1 73 GLY n 1 74 ARG n 1 75 GLY n 1 76 LEU n 1 77 VAL n 1 78 GLN n 1 79 MSE n 1 80 GLY n 1 81 HIS n 1 82 ARG n 1 83 GLN n 1 84 ASP n 1 85 ASN n 1 86 LEU n 1 87 HIS n 1 88 PHE n 1 89 GLN n 1 90 GLU n 1 91 GLU n 1 92 VAL n 1 93 PHE n 1 94 ASP n 1 95 ASP n 1 96 TYR n 1 97 ALA n 1 98 ILE n 1 99 LEU n 1 100 ILE n 1 101 PRO n 1 102 ALA n 1 103 GLY n 1 104 THR n 1 105 TRP n 1 106 HIS n 1 107 ASN n 1 108 VAL n 1 109 ARG n 1 110 ASN n 1 111 THR n 1 112 GLY n 1 113 ASN n 1 114 ARG n 1 115 PRO n 1 116 LEU n 1 117 LYS n 1 118 LEU n 1 119 TYR n 1 120 SER n 1 121 ILE n 1 122 TYR n 1 123 ALA n 1 124 PRO n 1 125 PRO n 1 126 GLN n 1 127 HIS n 1 128 PRO n 1 129 HIS n 1 130 GLY n 1 131 THR n 1 132 VAL n 1 133 HIS n 1 134 GLU n 1 135 THR n 1 136 LYS n 1 137 ALA n 1 138 ILE n 1 139 ALA n 1 140 MSE n 1 141 ALA n 1 142 ALA n 1 143 GLU n 1 144 GLU n 1 145 HIS n 1 146 HIS n 1 147 HIS n 1 148 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene 10175341 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 86665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9K9C9_BACHD _struct_ref.pdbx_db_accession Q9K9C9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLHEEADHRVTDHGPRPFVVNIEDETKRNRAFRRALWTGDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGH RQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPPQHPHGTVHETKAIAMAAEEHHHL ; _struct_ref.pdbx_align_begin 149 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OA2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9K9C9 _struct_ref_seq.db_align_beg 149 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 295 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 149 _struct_ref_seq.pdbx_auth_seq_align_end 295 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OA2 GLY A 1 ? UNP Q9K9C9 ? ? 'expression tag' 148 1 1 2OA2 MSE A 48 ? UNP Q9K9C9 MET 195 'modified residue' 195 2 1 2OA2 MSE A 79 ? UNP Q9K9C9 MET 226 'modified residue' 226 3 1 2OA2 MSE A 140 ? UNP Q9K9C9 MET 287 'modified residue' 287 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OA2 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '10.0% MPD, 0.1M MES pH 6.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-11-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97971 1.0 3 0.97925 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97971, 0.97925' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2OA2 _reflns.d_resolution_high 1.410 _reflns.d_resolution_low 48.507 _reflns.number_obs 26400 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_netI_over_sigmaI 21.480 _reflns.percent_possible_obs 91.500 _reflns.B_iso_Wilson_estimate 23.109 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.41 1.46 5654 ? ? 0.457 2.6 ? ? ? ? 1638 59.50 1 1 1.46 1.52 8649 ? ? 0.388 3.3 ? ? ? ? 2091 73.40 2 1 1.52 1.59 12084 ? ? 0.301 5.0 ? ? ? ? 2409 86.20 3 1 1.59 1.67 17096 ? ? 0.247 7.2 ? ? ? ? 2600 97.70 4 1 1.67 1.78 20665 ? ? 0.183 10.0 ? ? ? ? 2894 99.00 5 1 1.78 1.91 22357 ? ? 0.121 15.0 ? ? ? ? 2636 99.00 6 1 1.91 2.11 32410 ? ? 0.084 24.2 ? ? ? ? 2927 99.70 7 1 2.11 2.41 38854 ? ? 0.065 34.0 ? ? ? ? 2783 99.80 8 1 2.41 ? 40047 ? ? 0.051 42.8 ? ? ? ? 2865 99.90 9 1 # _refine.entry_id 2OA2 _refine.ls_d_res_high 1.410 _refine.ls_d_res_low 48.507 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 93.470 _refine.ls_number_reflns_obs 26355 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. RESIDUES 149-157 AND 290-295 ARE DISORDERED AND WERE NOT MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.165 _refine.ls_R_factor_R_free 0.189 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1314 _refine.B_iso_mean 19.041 _refine.aniso_B[1][1] -0.850 _refine.aniso_B[2][2] -0.850 _refine.aniso_B[3][3] 1.690 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.pdbx_overall_ESU_R 0.061 _refine.pdbx_overall_ESU_R_Free 0.062 _refine.overall_SU_ML 0.049 _refine.overall_SU_B 2.766 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.166 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1052 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 1195 _refine_hist.d_res_high 1.410 _refine_hist.d_res_low 48.507 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1157 0.017 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1046 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1593 1.709 1.928 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2440 0.823 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 154 6.165 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 61 35.417 23.934 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 193 12.415 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 20.268 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 175 0.101 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1322 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 236 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 195 0.198 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1028 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 523 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 699 0.088 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 97 0.162 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 3 0.058 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 57 0.278 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 30 0.141 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 739 2.006 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 280 0.500 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1139 2.666 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 497 4.168 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 442 5.485 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.411 _refine_ls_shell.d_res_low 1.448 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 64.790 _refine_ls_shell.number_reflns_R_work 1263 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.328 _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1334 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OA2 _struct.title 'Crystal structure of BH2720 (10175341) from Bacillus halodurans at 1.41 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;10175341, BH2720, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 2OA2 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? ASN A 30 ? ASN A 169 ASN A 177 1 ? 9 HELX_P HELX_P2 2 THR A 135 ? ALA A 142 ? THR A 282 ALA A 289 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 47 C ? ? ? 1_555 A MSE 48 N ? ? A LEU 194 A MSE 195 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A MSE 48 C ? ? ? 1_555 A SER 49 N ? ? A MSE 195 A SER 196 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A GLN 78 C ? ? ? 1_555 A MSE 79 N ? ? A GLN 225 A MSE 226 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale4 covale both ? A MSE 79 C ? ? ? 1_555 A GLY 80 N ? ? A MSE 226 A GLY 227 1_555 ? ? ? ? ? ? ? 1.299 ? ? covale5 covale both ? A ALA 139 C ? ? ? 1_555 A MSE 140 N ? ? A ALA 286 A MSE 287 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 140 C ? ? ? 1_555 A ALA 141 N ? ? A MSE 287 A ALA 288 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 15 A . ? GLY 162 A PRO 16 A ? PRO 163 A 1 -0.81 2 ALA 123 A . ? ALA 270 A PRO 124 A ? PRO 271 A 1 -10.62 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 97 ? ILE A 100 ? ALA A 244 ILE A 247 A 2 ASP A 65 ? GLU A 72 ? ASP A 212 GLU A 219 A 3 LEU A 116 ? ALA A 123 ? LEU A 263 ALA A 270 A 4 GLN A 44 ? ILE A 50 ? GLN A 191 ILE A 197 A 5 ARG A 34 ? THR A 39 ? ARG A 181 THR A 186 A 6 VAL A 132 ? HIS A 133 ? VAL A 279 HIS A 280 B 1 PHE A 88 ? PHE A 93 ? PHE A 235 PHE A 240 B 2 ARG A 74 ? GLY A 80 ? ARG A 221 GLY A 227 B 3 TRP A 105 ? ASN A 110 ? TRP A 252 ASN A 257 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 100 ? O ILE A 247 N GLN A 66 ? N GLN A 213 A 2 3 N PHE A 67 ? N PHE A 214 O ILE A 121 ? O ILE A 268 A 3 4 O LEU A 118 ? O LEU A 265 N MSE A 48 ? N MSE A 195 A 4 5 O VAL A 45 ? O VAL A 192 N TRP A 38 ? N TRP A 185 A 5 6 N ARG A 34 ? N ARG A 181 O HIS A 133 ? O HIS A 280 B 1 2 O GLU A 90 ? O GLU A 237 N VAL A 77 ? N VAL A 224 B 2 3 N GLY A 80 ? N GLY A 227 O TRP A 105 ? O TRP A 252 # _atom_sites.entry_id 2OA2 _atom_sites.fract_transf_matrix[1][1] 0.01457 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01457 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01664 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 148 ? ? ? A . n A 1 2 SER 2 149 ? ? ? A . n A 1 3 LEU 3 150 ? ? ? A . n A 1 4 HIS 4 151 ? ? ? A . n A 1 5 GLU 5 152 ? ? ? A . n A 1 6 GLU 6 153 ? ? ? A . n A 1 7 ALA 7 154 ? ? ? A . n A 1 8 ASP 8 155 ? ? ? A . n A 1 9 HIS 9 156 ? ? ? A . n A 1 10 ARG 10 157 ? ? ? A . n A 1 11 VAL 11 158 158 VAL VAL A . n A 1 12 THR 12 159 159 THR THR A . n A 1 13 ASP 13 160 160 ASP ASP A . n A 1 14 HIS 14 161 161 HIS HIS A . n A 1 15 GLY 15 162 162 GLY GLY A . n A 1 16 PRO 16 163 163 PRO PRO A . n A 1 17 ARG 17 164 164 ARG ARG A . n A 1 18 PRO 18 165 165 PRO PRO A . n A 1 19 PHE 19 166 166 PHE PHE A . n A 1 20 VAL 20 167 167 VAL VAL A . n A 1 21 VAL 21 168 168 VAL VAL A . n A 1 22 ASN 22 169 169 ASN ASN A . n A 1 23 ILE 23 170 170 ILE ILE A . n A 1 24 GLU 24 171 171 GLU GLU A . n A 1 25 ASP 25 172 172 ASP ASP A . n A 1 26 GLU 26 173 173 GLU GLU A . n A 1 27 THR 27 174 174 THR THR A . n A 1 28 LYS 28 175 175 LYS LYS A . n A 1 29 ARG 29 176 176 ARG ARG A . n A 1 30 ASN 30 177 177 ASN ASN A . n A 1 31 ARG 31 178 178 ARG ARG A . n A 1 32 ALA 32 179 179 ALA ALA A . n A 1 33 PHE 33 180 180 PHE PHE A . n A 1 34 ARG 34 181 181 ARG ARG A . n A 1 35 ARG 35 182 182 ARG ARG A . n A 1 36 ALA 36 183 183 ALA ALA A . n A 1 37 LEU 37 184 184 LEU LEU A . n A 1 38 TRP 38 185 185 TRP TRP A . n A 1 39 THR 39 186 186 THR THR A . n A 1 40 GLY 40 187 187 GLY GLY A . n A 1 41 ASP 41 188 188 ASP ASP A . n A 1 42 HIS 42 189 189 HIS HIS A . n A 1 43 LEU 43 190 190 LEU LEU A . n A 1 44 GLN 44 191 191 GLN GLN A . n A 1 45 VAL 45 192 192 VAL VAL A . n A 1 46 THR 46 193 193 THR THR A . n A 1 47 LEU 47 194 194 LEU LEU A . n A 1 48 MSE 48 195 195 MSE MSE A . n A 1 49 SER 49 196 196 SER SER A . n A 1 50 ILE 50 197 197 ILE ILE A . n A 1 51 GLN 51 198 198 GLN GLN A . n A 1 52 VAL 52 199 199 VAL VAL A . n A 1 53 GLY 53 200 200 GLY GLY A . n A 1 54 GLU 54 201 201 GLU GLU A . n A 1 55 ASP 55 202 202 ASP ASP A . n A 1 56 ILE 56 203 203 ILE ILE A . n A 1 57 GLY 57 204 204 GLY GLY A . n A 1 58 LEU 58 205 205 LEU LEU A . n A 1 59 GLU 59 206 206 GLU GLU A . n A 1 60 ILE 60 207 207 ILE ILE A . n A 1 61 HIS 61 208 208 HIS HIS A . n A 1 62 PRO 62 209 209 PRO PRO A . n A 1 63 HIS 63 210 210 HIS HIS A . n A 1 64 LEU 64 211 211 LEU LEU A . n A 1 65 ASP 65 212 212 ASP ASP A . n A 1 66 GLN 66 213 213 GLN GLN A . n A 1 67 PHE 67 214 214 PHE PHE A . n A 1 68 LEU 68 215 215 LEU LEU A . n A 1 69 ARG 69 216 216 ARG ARG A . n A 1 70 VAL 70 217 217 VAL VAL A . n A 1 71 GLU 71 218 218 GLU GLU A . n A 1 72 GLU 72 219 219 GLU GLU A . n A 1 73 GLY 73 220 220 GLY GLY A . n A 1 74 ARG 74 221 221 ARG ARG A . n A 1 75 GLY 75 222 222 GLY GLY A . n A 1 76 LEU 76 223 223 LEU LEU A . n A 1 77 VAL 77 224 224 VAL VAL A . n A 1 78 GLN 78 225 225 GLN GLN A . n A 1 79 MSE 79 226 226 MSE MSE A . n A 1 80 GLY 80 227 227 GLY GLY A . n A 1 81 HIS 81 228 228 HIS HIS A . n A 1 82 ARG 82 229 229 ARG ARG A . n A 1 83 GLN 83 230 230 GLN GLN A . n A 1 84 ASP 84 231 231 ASP ASP A . n A 1 85 ASN 85 232 232 ASN ASN A . n A 1 86 LEU 86 233 233 LEU LEU A . n A 1 87 HIS 87 234 234 HIS HIS A . n A 1 88 PHE 88 235 235 PHE PHE A . n A 1 89 GLN 89 236 236 GLN GLN A . n A 1 90 GLU 90 237 237 GLU GLU A . n A 1 91 GLU 91 238 238 GLU GLU A . n A 1 92 VAL 92 239 239 VAL VAL A . n A 1 93 PHE 93 240 240 PHE PHE A . n A 1 94 ASP 94 241 241 ASP ASP A . n A 1 95 ASP 95 242 242 ASP ASP A . n A 1 96 TYR 96 243 243 TYR TYR A . n A 1 97 ALA 97 244 244 ALA ALA A . n A 1 98 ILE 98 245 245 ILE ILE A . n A 1 99 LEU 99 246 246 LEU LEU A . n A 1 100 ILE 100 247 247 ILE ILE A . n A 1 101 PRO 101 248 248 PRO PRO A . n A 1 102 ALA 102 249 249 ALA ALA A . n A 1 103 GLY 103 250 250 GLY GLY A . n A 1 104 THR 104 251 251 THR THR A . n A 1 105 TRP 105 252 252 TRP TRP A . n A 1 106 HIS 106 253 253 HIS HIS A . n A 1 107 ASN 107 254 254 ASN ASN A . n A 1 108 VAL 108 255 255 VAL VAL A . n A 1 109 ARG 109 256 256 ARG ARG A . n A 1 110 ASN 110 257 257 ASN ASN A . n A 1 111 THR 111 258 258 THR THR A . n A 1 112 GLY 112 259 259 GLY GLY A . n A 1 113 ASN 113 260 260 ASN ASN A . n A 1 114 ARG 114 261 261 ARG ARG A . n A 1 115 PRO 115 262 262 PRO PRO A . n A 1 116 LEU 116 263 263 LEU LEU A . n A 1 117 LYS 117 264 264 LYS LYS A . n A 1 118 LEU 118 265 265 LEU LEU A . n A 1 119 TYR 119 266 266 TYR TYR A . n A 1 120 SER 120 267 267 SER SER A . n A 1 121 ILE 121 268 268 ILE ILE A . n A 1 122 TYR 122 269 269 TYR TYR A . n A 1 123 ALA 123 270 270 ALA ALA A . n A 1 124 PRO 124 271 271 PRO PRO A . n A 1 125 PRO 125 272 272 PRO PRO A . n A 1 126 GLN 126 273 273 GLN GLN A . n A 1 127 HIS 127 274 274 HIS HIS A . n A 1 128 PRO 128 275 275 PRO PRO A . n A 1 129 HIS 129 276 276 HIS HIS A . n A 1 130 GLY 130 277 277 GLY GLY A . n A 1 131 THR 131 278 278 THR THR A . n A 1 132 VAL 132 279 279 VAL VAL A . n A 1 133 HIS 133 280 280 HIS HIS A . n A 1 134 GLU 134 281 281 GLU GLU A . n A 1 135 THR 135 282 282 THR THR A . n A 1 136 LYS 136 283 283 LYS LYS A . n A 1 137 ALA 137 284 284 ALA ALA A . n A 1 138 ILE 138 285 285 ILE ILE A . n A 1 139 ALA 139 286 286 ALA ALA A . n A 1 140 MSE 140 287 287 MSE MSE A . n A 1 141 ALA 141 288 288 ALA ALA A . n A 1 142 ALA 142 289 289 ALA ALA A . n A 1 143 GLU 143 290 ? ? ? A . n A 1 144 GLU 144 291 ? ? ? A . n A 1 145 HIS 145 292 ? ? ? A . n A 1 146 HIS 146 293 ? ? ? A . n A 1 147 HIS 147 294 ? ? ? A . n A 1 148 LEU 148 295 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . B 2 HOH 74 74 74 HOH HOH A . B 2 HOH 75 75 75 HOH HOH A . B 2 HOH 76 76 76 HOH HOH A . B 2 HOH 77 77 77 HOH HOH A . B 2 HOH 78 78 78 HOH HOH A . B 2 HOH 79 79 79 HOH HOH A . B 2 HOH 80 80 80 HOH HOH A . B 2 HOH 81 81 81 HOH HOH A . B 2 HOH 82 82 82 HOH HOH A . B 2 HOH 83 83 83 HOH HOH A . B 2 HOH 84 84 84 HOH HOH A . B 2 HOH 85 85 85 HOH HOH A . B 2 HOH 86 86 86 HOH HOH A . B 2 HOH 87 87 87 HOH HOH A . B 2 HOH 88 88 88 HOH HOH A . B 2 HOH 89 89 89 HOH HOH A . B 2 HOH 90 90 90 HOH HOH A . B 2 HOH 91 91 91 HOH HOH A . B 2 HOH 92 92 92 HOH HOH A . B 2 HOH 93 93 93 HOH HOH A . B 2 HOH 94 94 94 HOH HOH A . B 2 HOH 95 95 95 HOH HOH A . B 2 HOH 96 96 96 HOH HOH A . B 2 HOH 97 97 97 HOH HOH A . B 2 HOH 98 98 98 HOH HOH A . B 2 HOH 99 99 99 HOH HOH A . B 2 HOH 100 100 100 HOH HOH A . B 2 HOH 101 101 101 HOH HOH A . B 2 HOH 102 102 102 HOH HOH A . B 2 HOH 103 103 103 HOH HOH A . B 2 HOH 104 104 104 HOH HOH A . B 2 HOH 105 105 105 HOH HOH A . B 2 HOH 106 106 106 HOH HOH A . B 2 HOH 107 107 107 HOH HOH A . B 2 HOH 108 108 108 HOH HOH A . B 2 HOH 109 109 109 HOH HOH A . B 2 HOH 110 110 110 HOH HOH A . B 2 HOH 111 111 111 HOH HOH A . B 2 HOH 112 112 112 HOH HOH A . B 2 HOH 113 113 113 HOH HOH A . B 2 HOH 114 114 114 HOH HOH A . B 2 HOH 115 115 115 HOH HOH A . B 2 HOH 116 116 116 HOH HOH A . B 2 HOH 117 117 117 HOH HOH A . B 2 HOH 118 118 118 HOH HOH A . B 2 HOH 119 119 119 HOH HOH A . B 2 HOH 120 120 120 HOH HOH A . B 2 HOH 121 121 121 HOH HOH A . B 2 HOH 122 122 122 HOH HOH A . B 2 HOH 123 123 123 HOH HOH A . B 2 HOH 124 124 124 HOH HOH A . B 2 HOH 125 125 125 HOH HOH A . B 2 HOH 126 126 126 HOH HOH A . B 2 HOH 127 127 127 HOH HOH A . B 2 HOH 128 128 128 HOH HOH A . B 2 HOH 129 129 129 HOH HOH A . B 2 HOH 130 130 130 HOH HOH A . B 2 HOH 131 131 131 HOH HOH A . B 2 HOH 132 132 132 HOH HOH A . B 2 HOH 133 133 133 HOH HOH A . B 2 HOH 134 134 134 HOH HOH A . B 2 HOH 135 135 135 HOH HOH A . B 2 HOH 136 136 136 HOH HOH A . B 2 HOH 137 137 137 HOH HOH A . B 2 HOH 138 138 138 HOH HOH A . B 2 HOH 139 139 139 HOH HOH A . B 2 HOH 140 140 140 HOH HOH A . B 2 HOH 141 141 141 HOH HOH A . B 2 HOH 142 142 142 HOH HOH A . B 2 HOH 143 143 143 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 48 A MSE 195 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 226 ? MET SELENOMETHIONINE 3 A MSE 140 A MSE 287 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2970 ? 1 MORE -25 ? 1 'SSA (A^2)' 11120 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 60.1060000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-16 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 21.4539 _pdbx_refine_tls.origin_y 24.7055 _pdbx_refine_tls.origin_z 19.7693 _pdbx_refine_tls.T[1][1] -0.0658 _pdbx_refine_tls.T[2][2] -0.0490 _pdbx_refine_tls.T[3][3] -0.0080 _pdbx_refine_tls.T[1][2] -0.0089 _pdbx_refine_tls.T[1][3] -0.0057 _pdbx_refine_tls.T[2][3] -0.0103 _pdbx_refine_tls.L[1][1] 0.7261 _pdbx_refine_tls.L[2][2] 0.6543 _pdbx_refine_tls.L[3][3] 2.0416 _pdbx_refine_tls.L[1][2] 0.0760 _pdbx_refine_tls.L[1][3] 0.2592 _pdbx_refine_tls.L[2][3] 0.4532 _pdbx_refine_tls.S[1][1] -0.0307 _pdbx_refine_tls.S[2][2] -0.0273 _pdbx_refine_tls.S[3][3] 0.0579 _pdbx_refine_tls.S[1][2] 0.1510 _pdbx_refine_tls.S[1][3] 0.0273 _pdbx_refine_tls.S[2][3] 0.0869 _pdbx_refine_tls.S[2][1] -0.1218 _pdbx_refine_tls.S[3][1] -0.1762 _pdbx_refine_tls.S[3][2] 0.0261 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 11 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 142 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 158 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 289 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE, FOLLOWED BY THE TARGET SEQUENCE. THE CONSTRUCT IS A TRUNCATION OF THE FULL LENGTH PROTEIN, WITH ONLY RESIDUES 149-225 EXPRESSED. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 241 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 241 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 241 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.78 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 7.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 163 ? ? -99.49 39.97 2 1 ASP A 242 ? ? 91.89 -7.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 176 ? NE ? A ARG 29 NE 2 1 Y 1 A ARG 176 ? CZ ? A ARG 29 CZ 3 1 Y 1 A ARG 176 ? NH1 ? A ARG 29 NH1 4 1 Y 1 A ARG 176 ? NH2 ? A ARG 29 NH2 5 1 Y 1 A ARG 178 ? CZ ? A ARG 31 CZ 6 1 Y 1 A ARG 178 ? NH1 ? A ARG 31 NH1 7 1 Y 1 A ARG 178 ? NH2 ? A ARG 31 NH2 8 1 Y 1 A ARG 221 ? CD ? A ARG 74 CD 9 1 Y 1 A ARG 221 ? NE ? A ARG 74 NE 10 1 Y 1 A ARG 221 ? CZ ? A ARG 74 CZ 11 1 Y 1 A ARG 221 ? NH1 ? A ARG 74 NH1 12 1 Y 1 A ARG 221 ? NH2 ? A ARG 74 NH2 13 1 Y 1 A GLU 281 ? CD ? A GLU 134 CD 14 1 Y 1 A GLU 281 ? OE1 ? A GLU 134 OE1 15 1 Y 1 A GLU 281 ? OE2 ? A GLU 134 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 148 ? A GLY 1 2 1 Y 1 A SER 149 ? A SER 2 3 1 Y 1 A LEU 150 ? A LEU 3 4 1 Y 1 A HIS 151 ? A HIS 4 5 1 Y 1 A GLU 152 ? A GLU 5 6 1 Y 1 A GLU 153 ? A GLU 6 7 1 Y 1 A ALA 154 ? A ALA 7 8 1 Y 1 A ASP 155 ? A ASP 8 9 1 Y 1 A HIS 156 ? A HIS 9 10 1 Y 1 A ARG 157 ? A ARG 10 11 1 Y 1 A GLU 290 ? A GLU 143 12 1 Y 1 A GLU 291 ? A GLU 144 13 1 Y 1 A HIS 292 ? A HIS 145 14 1 Y 1 A HIS 293 ? A HIS 146 15 1 Y 1 A HIS 294 ? A HIS 147 16 1 Y 1 A LEU 295 ? A LEU 148 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #