HEADER TRANSFERASE 17-DEC-06 2OAS TITLE CRYSTAL STRUCTURE OF 4-HYDROXYBUTYRATE COENZYME A TRANSFERASE (ATOA) TITLE 2 IN COMPLEX WITH COA FROM SHEWANELLA ONEIDENSIS, NORTHEAST STRUCTURAL TITLE 3 GENOMICS TARGET SOR119. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXYBUTYRATE COENZYME A TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATOA; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: CAT2, SO_1708; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: BL21; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ALPHA BETA PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,H.NEELY,M.HUSSAIN,J.BENACH,J.SEETHARAMAN,K.CUNNINGHAM, AUTHOR 2 L.C.MA,L.OWEN,Y.FANG,R.XIAO,J.LIU,M.C.BARAN,T.B.ACTON, AUTHOR 3 G.T.MONTELIONE,J.F.HUNT,L.TONG,NORTHEAST STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (NESG) REVDAT 6 30-OCT-24 2OAS 1 REMARK REVDAT 5 27-DEC-23 2OAS 1 REMARK SEQADV LINK REVDAT 4 18-OCT-17 2OAS 1 REMARK REVDAT 3 13-JUL-11 2OAS 1 VERSN REVDAT 2 24-FEB-09 2OAS 1 VERSN REVDAT 1 23-JAN-07 2OAS 0 JRNL AUTH F.FOROUHAR,H.NEELY,M.HUSSAIN,J.BENACH,J.SEETHARAMAN, JRNL AUTH 2 K.CUNNINGHAM,L.C.MA,L.OWEN,Y.FANG,R.XIAO,J.LIU,M.C.BARAN, JRNL AUTH 3 T.B.ACTON,G.T.MONTELIONE,J.F.HUNT,L.TONG JRNL TITL CRYSTAL STRUCTURE OF 4-HYDROXYBUTYRATE COENZYME A JRNL TITL 2 TRANSFERASE (ATOA) FROM SHEWANELLA ONEIDENSIS IN COMPLEX JRNL TITL 3 WITH COA, NORTHEAST STRUCTURAL GENOMICS TARGET SOR119. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.500 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 170270.800 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 85.4 REMARK 3 NUMBER OF REFLECTIONS : 51468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 5094 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.49 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 51.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2832 REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 286 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -17.26000 REMARK 3 B22 (A**2) : 1.73000 REMARK 3 B33 (A**2) : 15.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.770 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 21.61 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: XTALVIEW HAS ALSO BEEN USED IN REMARK 3 REFINEMENT. THE FRIEDEL PAIRS WERE USED FOR PHASING REMARK 4 REMARK 4 2OAS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040902. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : 0.10300 REMARK 200 FOR THE DATA SET : 23.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.48200 REMARK 200 R SYM FOR SHELL (I) : 0.44100 REMARK 200 FOR SHELL : 2.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 20% PEG 6000, 1M LITHIUM REMARK 280 CHLORIDE, 5MM DTT, 5MM ACETYL-COA, PH 7.0, MICROBATCH UNDER OIL, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.71500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.71500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.07850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.66850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.07850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.66850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.71500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.07850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.66850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.71500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.07850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.66850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 80.15700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 89.71500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 LEU A 429 REMARK 465 GLU A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 MSE B 1 REMARK 465 LEU B 429 REMARK 465 GLU B 430 REMARK 465 HIS B 431 REMARK 465 HIS B 432 REMARK 465 HIS B 433 REMARK 465 HIS B 434 REMARK 465 HIS B 435 REMARK 465 HIS B 436 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 233 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 GLU B 233 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 27 -138.85 63.40 REMARK 500 LEU A 53 -151.01 -123.07 REMARK 500 GLU A 134 -121.47 31.86 REMARK 500 HIS A 181 95.13 47.76 REMARK 500 THR A 185 129.74 -173.80 REMARK 500 TYR A 256 60.18 61.56 REMARK 500 ASP A 276 109.11 -54.43 REMARK 500 LEU A 312 -2.20 -59.97 REMARK 500 SER A 327 -99.88 -138.05 REMARK 500 HIS A 381 -73.44 -120.78 REMARK 500 MSE B 27 -138.24 63.02 REMARK 500 LEU B 53 -150.85 -122.59 REMARK 500 GLU B 134 -122.10 34.61 REMARK 500 GLN B 174 139.94 -170.20 REMARK 500 HIS B 181 95.52 47.28 REMARK 500 THR B 185 129.03 -173.94 REMARK 500 TYR B 256 60.53 62.25 REMARK 500 SER B 327 -99.55 -138.19 REMARK 500 HIS B 381 -73.59 -120.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SOR119 RELATED DB: TARGETDB DBREF 2OAS A 1 428 UNP Q8EG98 Q8EG98_SHEON 1 428 DBREF 2OAS B 1 428 UNP Q8EG98 Q8EG98_SHEON 1 428 SEQADV 2OAS MSE A 1 UNP Q8EG98 MET 1 MODIFIED RESIDUE SEQADV 2OAS MSE A 27 UNP Q8EG98 MET 27 MODIFIED RESIDUE SEQADV 2OAS MSE A 126 UNP Q8EG98 MET 126 MODIFIED RESIDUE SEQADV 2OAS MSE A 154 UNP Q8EG98 MET 154 MODIFIED RESIDUE SEQADV 2OAS MSE A 209 UNP Q8EG98 MET 209 MODIFIED RESIDUE SEQADV 2OAS MSE A 284 UNP Q8EG98 MET 284 MODIFIED RESIDUE SEQADV 2OAS MSE A 302 UNP Q8EG98 MET 302 MODIFIED RESIDUE SEQADV 2OAS MSE A 333 UNP Q8EG98 MET 333 MODIFIED RESIDUE SEQADV 2OAS LEU A 429 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS GLU A 430 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 431 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 432 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 433 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 434 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 435 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS A 436 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS MSE B 1 UNP Q8EG98 MET 1 MODIFIED RESIDUE SEQADV 2OAS MSE B 27 UNP Q8EG98 MET 27 MODIFIED RESIDUE SEQADV 2OAS MSE B 126 UNP Q8EG98 MET 126 MODIFIED RESIDUE SEQADV 2OAS MSE B 154 UNP Q8EG98 MET 154 MODIFIED RESIDUE SEQADV 2OAS MSE B 209 UNP Q8EG98 MET 209 MODIFIED RESIDUE SEQADV 2OAS MSE B 284 UNP Q8EG98 MET 284 MODIFIED RESIDUE SEQADV 2OAS MSE B 302 UNP Q8EG98 MET 302 MODIFIED RESIDUE SEQADV 2OAS MSE B 333 UNP Q8EG98 MET 333 MODIFIED RESIDUE SEQADV 2OAS LEU B 429 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS GLU B 430 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 431 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 432 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 433 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 434 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 435 UNP Q8EG98 CLONING ARTIFACT SEQADV 2OAS HIS B 436 UNP Q8EG98 CLONING ARTIFACT SEQRES 1 A 436 MSE PRO ALA ILE VAL CYS GLN SER ALA LEU GLU ALA VAL SEQRES 2 A 436 SER LEU ILE ARG SER GLY GLU THR LEU TRP THR HIS SER SEQRES 3 A 436 MSE GLY ALA THR PRO LYS VAL LEU LEU ASP ALA LEU ALA SEQRES 4 A 436 LYS HIS ALA LEU THR LEU ASP ASN ILE THR LEU LEU GLN SEQRES 5 A 436 LEU HIS THR GLU GLY ALA GLU SER LEU SER HIS PRO SER SEQRES 6 A 436 LEU LEU GLY HIS LEU ARG HIS ARG CYS PHE PHE GLY GLY SEQRES 7 A 436 VAL PRO THR ARG PRO LEU LEU GLN SER GLY ASP ALA ASP SEQRES 8 A 436 TYR VAL PRO ILE PHE LEU SER GLU VAL PRO LYS LEU PHE SEQRES 9 A 436 ARG SER GLY GLU GLN LYS ILE ASP THR ALA ILE ILE GLN SEQRES 10 A 436 VAL SER PRO PRO ASP LYS HIS GLY MSE CYS SER LEU GLY SEQRES 11 A 436 ILE SER VAL GLU ALA THR LEU ALA ALA CYS GLN VAL ALA SEQRES 12 A 436 GLY LYS ILE ILE ALA HIS ILE ASN PRO GLN MSE PRO ARG SEQRES 13 A 436 THR HIS GLY ASP GLY PHE ILE HIS ILE ASP ARG PHE ALA SEQRES 14 A 436 ALA VAL TYR GLU GLN SER ALA SER LEU PRO ILE HIS SER SEQRES 15 A 436 PHE ALA THR GLY ASP ALA VAL SER LEU ALA ILE GLY GLN SEQRES 16 A 436 HIS VAL ALA GLU LEU VAL ARG ASP GLY ASP CYS LEU GLN SEQRES 17 A 436 MSE GLY ILE GLY ALA ILE PRO ASP ALA VAL LEU SER CYS SEQRES 18 A 436 LEU THR GLY HIS LYS ASP LEU GLY VAL HIS THR GLU LEU SEQRES 19 A 436 PHE SER ASP GLY ILE LEU GLN LEU VAL GLU LYS GLY VAL SEQRES 20 A 436 ILE ASN ASN THR LYS LYS ARG PHE TYR PRO GLY LYS LEU SEQRES 21 A 436 VAL THR GLY PHE ALA LEU GLY SER GLN LYS LEU TYR ASP SEQRES 22 A 436 TYR VAL ASP ASP ASN PRO ALA VAL ILE PHE MSE ASP ILE SEQRES 23 A 436 GLU GLN VAL ASN ASP THR SER ILE ILE ARG LYS ASN PRO SEQRES 24 A 436 ASN VAL MSE ALA ILE ASN SER ALA LEU GLN VAL ASP LEU SEQRES 25 A 436 THR GLY GLN VAL CYS ALA ASP SER ILE GLY THR LYS ILE SEQRES 26 A 436 TYR SER GLY VAL GLY GLY GLN MSE ASP PHE ILE ARG GLY SEQRES 27 A 436 ALA GLY LEU SER GLU GLY GLY ARG SER VAL ILE ALA LEU SEQRES 28 A 436 PRO SER THR ALA ALA GLY GLY ARG ILE SER ARG ILE ALA SEQRES 29 A 436 SER VAL LEU SER PRO GLY ALA GLY VAL VAL THR THR ARG SEQRES 30 A 436 ALA HIS VAL HIS TYR ILE VAL THR GLU TYR GLY ALA ALA SEQRES 31 A 436 ASN LEU LYS GLY ARG SER LEU ARG GLU ARG ALA GLN ALA SEQRES 32 A 436 LEU ILE ASN ILE ALA HIS PRO ASP PHE ARG GLU GLN LEU SEQRES 33 A 436 SER ARG ASP ALA PHE GLU VAL TRP GLY LEU ASN LEU LEU SEQRES 34 A 436 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 436 MSE PRO ALA ILE VAL CYS GLN SER ALA LEU GLU ALA VAL SEQRES 2 B 436 SER LEU ILE ARG SER GLY GLU THR LEU TRP THR HIS SER SEQRES 3 B 436 MSE GLY ALA THR PRO LYS VAL LEU LEU ASP ALA LEU ALA SEQRES 4 B 436 LYS HIS ALA LEU THR LEU ASP ASN ILE THR LEU LEU GLN SEQRES 5 B 436 LEU HIS THR GLU GLY ALA GLU SER LEU SER HIS PRO SER SEQRES 6 B 436 LEU LEU GLY HIS LEU ARG HIS ARG CYS PHE PHE GLY GLY SEQRES 7 B 436 VAL PRO THR ARG PRO LEU LEU GLN SER GLY ASP ALA ASP SEQRES 8 B 436 TYR VAL PRO ILE PHE LEU SER GLU VAL PRO LYS LEU PHE SEQRES 9 B 436 ARG SER GLY GLU GLN LYS ILE ASP THR ALA ILE ILE GLN SEQRES 10 B 436 VAL SER PRO PRO ASP LYS HIS GLY MSE CYS SER LEU GLY SEQRES 11 B 436 ILE SER VAL GLU ALA THR LEU ALA ALA CYS GLN VAL ALA SEQRES 12 B 436 GLY LYS ILE ILE ALA HIS ILE ASN PRO GLN MSE PRO ARG SEQRES 13 B 436 THR HIS GLY ASP GLY PHE ILE HIS ILE ASP ARG PHE ALA SEQRES 14 B 436 ALA VAL TYR GLU GLN SER ALA SER LEU PRO ILE HIS SER SEQRES 15 B 436 PHE ALA THR GLY ASP ALA VAL SER LEU ALA ILE GLY GLN SEQRES 16 B 436 HIS VAL ALA GLU LEU VAL ARG ASP GLY ASP CYS LEU GLN SEQRES 17 B 436 MSE GLY ILE GLY ALA ILE PRO ASP ALA VAL LEU SER CYS SEQRES 18 B 436 LEU THR GLY HIS LYS ASP LEU GLY VAL HIS THR GLU LEU SEQRES 19 B 436 PHE SER ASP GLY ILE LEU GLN LEU VAL GLU LYS GLY VAL SEQRES 20 B 436 ILE ASN ASN THR LYS LYS ARG PHE TYR PRO GLY LYS LEU SEQRES 21 B 436 VAL THR GLY PHE ALA LEU GLY SER GLN LYS LEU TYR ASP SEQRES 22 B 436 TYR VAL ASP ASP ASN PRO ALA VAL ILE PHE MSE ASP ILE SEQRES 23 B 436 GLU GLN VAL ASN ASP THR SER ILE ILE ARG LYS ASN PRO SEQRES 24 B 436 ASN VAL MSE ALA ILE ASN SER ALA LEU GLN VAL ASP LEU SEQRES 25 B 436 THR GLY GLN VAL CYS ALA ASP SER ILE GLY THR LYS ILE SEQRES 26 B 436 TYR SER GLY VAL GLY GLY GLN MSE ASP PHE ILE ARG GLY SEQRES 27 B 436 ALA GLY LEU SER GLU GLY GLY ARG SER VAL ILE ALA LEU SEQRES 28 B 436 PRO SER THR ALA ALA GLY GLY ARG ILE SER ARG ILE ALA SEQRES 29 B 436 SER VAL LEU SER PRO GLY ALA GLY VAL VAL THR THR ARG SEQRES 30 B 436 ALA HIS VAL HIS TYR ILE VAL THR GLU TYR GLY ALA ALA SEQRES 31 B 436 ASN LEU LYS GLY ARG SER LEU ARG GLU ARG ALA GLN ALA SEQRES 32 B 436 LEU ILE ASN ILE ALA HIS PRO ASP PHE ARG GLU GLN LEU SEQRES 33 B 436 SER ARG ASP ALA PHE GLU VAL TRP GLY LEU ASN LEU LEU SEQRES 34 B 436 GLU HIS HIS HIS HIS HIS HIS MODRES 2OAS MSE A 27 MET SELENOMETHIONINE MODRES 2OAS MSE A 126 MET SELENOMETHIONINE MODRES 2OAS MSE A 154 MET SELENOMETHIONINE MODRES 2OAS MSE A 209 MET SELENOMETHIONINE MODRES 2OAS MSE A 284 MET SELENOMETHIONINE MODRES 2OAS MSE A 302 MET SELENOMETHIONINE MODRES 2OAS MSE A 333 MET SELENOMETHIONINE MODRES 2OAS MSE B 27 MET SELENOMETHIONINE MODRES 2OAS MSE B 126 MET SELENOMETHIONINE MODRES 2OAS MSE B 154 MET SELENOMETHIONINE MODRES 2OAS MSE B 209 MET SELENOMETHIONINE MODRES 2OAS MSE B 284 MET SELENOMETHIONINE MODRES 2OAS MSE B 302 MET SELENOMETHIONINE MODRES 2OAS MSE B 333 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 126 8 HET MSE A 154 8 HET MSE A 209 8 HET MSE A 284 8 HET MSE A 302 8 HET MSE A 333 8 HET MSE B 27 8 HET MSE B 126 8 HET MSE B 154 8 HET MSE B 209 8 HET MSE B 284 8 HET MSE B 302 8 HET MSE B 333 8 HET COA A 501 48 HET COA B 501 48 HETNAM MSE SELENOMETHIONINE HETNAM COA COENZYME A FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 COA 2(C21 H36 N7 O16 P3 S) FORMUL 5 HOH *151(H2 O) HELIX 1 1 SER A 8 SER A 14 1 7 HELIX 2 2 SER A 26 THR A 30 5 5 HELIX 3 3 PRO A 31 ALA A 42 1 12 HELIX 4 4 LEU A 43 LEU A 45 5 3 HELIX 5 5 ALA A 58 LEU A 67 5 10 HELIX 6 6 THR A 81 SER A 87 1 7 HELIX 7 7 PHE A 96 SER A 98 5 3 HELIX 8 8 GLU A 99 SER A 106 1 8 HELIX 9 9 ALA A 135 ALA A 143 1 9 HELIX 10 10 ASP A 166 PHE A 168 5 3 HELIX 11 11 ASP A 187 VAL A 201 1 15 HELIX 12 12 GLY A 212 CYS A 221 1 10 HELIX 13 13 SER A 236 LYS A 245 1 10 HELIX 14 14 SER A 268 ASP A 276 1 9 HELIX 15 15 ASP A 285 ASN A 290 1 6 HELIX 16 16 ASP A 291 ARG A 296 1 6 HELIX 17 17 GLY A 331 SER A 342 1 12 HELIX 18 18 SER A 396 ASN A 406 1 11 HELIX 19 19 HIS A 409 VAL A 423 1 15 HELIX 20 20 SER B 8 SER B 14 1 7 HELIX 21 21 SER B 26 THR B 30 5 5 HELIX 22 22 PRO B 31 ALA B 42 1 12 HELIX 23 23 LEU B 43 LEU B 45 5 3 HELIX 24 24 ALA B 58 LEU B 67 5 10 HELIX 25 25 THR B 81 SER B 87 1 7 HELIX 26 26 PHE B 96 SER B 98 5 3 HELIX 27 27 GLU B 99 SER B 106 1 8 HELIX 28 28 ALA B 135 ALA B 143 1 9 HELIX 29 29 ASP B 166 PHE B 168 5 3 HELIX 30 30 ASP B 187 GLU B 199 1 13 HELIX 31 31 GLY B 212 CYS B 221 1 10 HELIX 32 32 SER B 236 LYS B 245 1 10 HELIX 33 33 SER B 268 ASP B 276 1 9 HELIX 34 34 ASP B 285 ASN B 290 1 6 HELIX 35 35 ASP B 291 ARG B 296 1 6 HELIX 36 36 GLY B 331 SER B 342 1 12 HELIX 37 37 SER B 396 ASN B 406 1 11 HELIX 38 38 HIS B 409 VAL B 423 1 15 SHEET 1 A 8 ILE A 4 VAL A 5 0 SHEET 2 A 8 ALA A 170 GLU A 173 1 O VAL A 171 N ILE A 4 SHEET 3 A 8 LYS A 145 ILE A 150 1 N ILE A 150 O TYR A 172 SHEET 4 A 8 THR A 113 VAL A 118 1 N ILE A 116 O HIS A 149 SHEET 5 A 8 THR A 21 THR A 24 1 N TRP A 23 O ILE A 115 SHEET 6 A 8 ILE A 48 GLN A 52 1 O THR A 49 N LEU A 22 SHEET 7 A 8 LEU A 70 CYS A 74 1 O ARG A 73 N LEU A 50 SHEET 8 A 8 ASP A 91 TYR A 92 1 O ASP A 91 N CYS A 74 SHEET 1 B 2 MSE A 126 SER A 128 0 SHEET 2 B 2 PHE A 162 HIS A 164 -1 O ILE A 163 N CYS A 127 SHEET 1 C 3 HIS A 158 GLY A 159 0 SHEET 2 C 3 VAL A 281 PHE A 283 1 O PHE A 283 N HIS A 158 SHEET 3 C 3 LEU A 260 THR A 262 1 N LEU A 260 O ILE A 282 SHEET 1 D 6 GLY A 229 VAL A 230 0 SHEET 2 D 6 CYS A 206 GLN A 208 1 N LEU A 207 O GLY A 229 SHEET 3 D 6 VAL A 301 ASN A 305 1 O ILE A 304 N GLN A 208 SHEET 4 D 6 ARG A 346 ALA A 350 1 O ALA A 350 N ASN A 305 SHEET 5 D 6 TYR A 382 THR A 385 1 O VAL A 384 N ILE A 349 SHEET 6 D 6 GLY A 388 ASN A 391 -1 O GLY A 388 N THR A 385 SHEET 1 E 2 LEU A 234 PHE A 235 0 SHEET 2 E 2 PHE A 264 ALA A 265 1 O PHE A 264 N PHE A 235 SHEET 1 F 4 ILE A 363 ALA A 364 0 SHEET 2 F 4 GLN A 309 ASP A 311 1 N VAL A 310 O ALA A 364 SHEET 3 F 4 VAL A 316 CYS A 317 -1 O CYS A 317 N GLN A 309 SHEET 4 F 4 VAL A 373 THR A 375 -1 O THR A 375 N VAL A 316 SHEET 1 G 2 SER A 320 ILE A 321 0 SHEET 2 G 2 LYS A 324 ILE A 325 -1 O LYS A 324 N ILE A 321 SHEET 1 H 2 THR A 354 ALA A 355 0 SHEET 2 H 2 ILE A 360 SER A 361 -1 N ILE A 360 O ALA A 355 SHEET 1 I 8 ILE B 4 VAL B 5 0 SHEET 2 I 8 ALA B 170 GLU B 173 1 O VAL B 171 N ILE B 4 SHEET 3 I 8 LYS B 145 ILE B 150 1 N ILE B 150 O TYR B 172 SHEET 4 I 8 THR B 113 VAL B 118 1 N ALA B 114 O ILE B 147 SHEET 5 I 8 THR B 21 THR B 24 1 N TRP B 23 O ILE B 115 SHEET 6 I 8 ILE B 48 GLN B 52 1 O LEU B 51 N LEU B 22 SHEET 7 I 8 LEU B 70 CYS B 74 1 O ARG B 73 N LEU B 50 SHEET 8 I 8 ASP B 91 TYR B 92 1 O ASP B 91 N CYS B 74 SHEET 1 J 2 MSE B 126 SER B 128 0 SHEET 2 J 2 PHE B 162 HIS B 164 -1 O ILE B 163 N CYS B 127 SHEET 1 K 3 HIS B 158 GLY B 159 0 SHEET 2 K 3 VAL B 281 PHE B 283 1 O PHE B 283 N HIS B 158 SHEET 3 K 3 LEU B 260 THR B 262 1 N LEU B 260 O ILE B 282 SHEET 1 L 6 GLY B 229 VAL B 230 0 SHEET 2 L 6 CYS B 206 GLN B 208 1 N LEU B 207 O GLY B 229 SHEET 3 L 6 VAL B 301 ASN B 305 1 O ILE B 304 N GLN B 208 SHEET 4 L 6 ARG B 346 ALA B 350 1 O ALA B 350 N ASN B 305 SHEET 5 L 6 TYR B 382 THR B 385 1 O VAL B 384 N ILE B 349 SHEET 6 L 6 GLY B 388 ASN B 391 -1 O GLY B 388 N THR B 385 SHEET 1 M 2 LEU B 234 PHE B 235 0 SHEET 2 M 2 PHE B 264 ALA B 265 1 O PHE B 264 N PHE B 235 SHEET 1 N 3 VAL B 316 CYS B 317 0 SHEET 2 N 3 GLN B 309 ASP B 311 -1 N GLN B 309 O CYS B 317 SHEET 3 N 3 ILE B 363 ALA B 364 1 O ALA B 364 N VAL B 310 SHEET 1 O 2 SER B 320 ILE B 321 0 SHEET 2 O 2 LYS B 324 ILE B 325 -1 O LYS B 324 N ILE B 321 SHEET 1 P 2 THR B 354 ALA B 355 0 SHEET 2 P 2 ILE B 360 SER B 361 -1 N ILE B 360 O ALA B 355 LINK C SER A 26 N MSE A 27 1555 1555 1.32 LINK C MSE A 27 N GLY A 28 1555 1555 1.33 LINK C GLY A 125 N MSE A 126 1555 1555 1.33 LINK C MSE A 126 N CYS A 127 1555 1555 1.33 LINK C GLN A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N PRO A 155 1555 1555 1.34 LINK C GLN A 208 N MSE A 209 1555 1555 1.34 LINK C MSE A 209 N GLY A 210 1555 1555 1.33 LINK CD GLU A 233 S1P COA A 501 1555 1555 1.83 LINK C PHE A 283 N MSE A 284 1555 1555 1.32 LINK C MSE A 284 N ASP A 285 1555 1555 1.33 LINK C VAL A 301 N MSE A 302 1555 1555 1.33 LINK C MSE A 302 N ALA A 303 1555 1555 1.32 LINK C GLN A 332 N MSE A 333 1555 1555 1.33 LINK C MSE A 333 N ASP A 334 1555 1555 1.33 LINK C SER B 26 N MSE B 27 1555 1555 1.33 LINK C MSE B 27 N GLY B 28 1555 1555 1.33 LINK C GLY B 125 N MSE B 126 1555 1555 1.33 LINK C MSE B 126 N CYS B 127 1555 1555 1.33 LINK C GLN B 153 N MSE B 154 1555 1555 1.32 LINK C MSE B 154 N PRO B 155 1555 1555 1.34 LINK C GLN B 208 N MSE B 209 1555 1555 1.33 LINK C MSE B 209 N GLY B 210 1555 1555 1.33 LINK CD GLU B 233 S1P COA B 501 1555 1555 1.80 LINK C PHE B 283 N MSE B 284 1555 1555 1.32 LINK C MSE B 284 N ASP B 285 1555 1555 1.33 LINK C VAL B 301 N MSE B 302 1555 1555 1.33 LINK C MSE B 302 N ALA B 303 1555 1555 1.33 LINK C GLN B 332 N MSE B 333 1555 1555 1.33 LINK C MSE B 333 N ASP B 334 1555 1555 1.32 SITE 1 AC1 21 PHE A 76 GLU A 233 PHE A 264 ALA A 307 SITE 2 AC1 21 LEU A 308 GLN A 309 ALA A 318 ILE A 321 SITE 3 AC1 21 TYR A 326 SER A 327 GLY A 328 VAL A 329 SITE 4 AC1 21 GLY A 330 GLY A 331 GLN A 332 ALA A 356 SITE 5 AC1 21 ILE A 360 ARG A 362 HOH A 545 HOH A 592 SITE 6 AC1 21 ARG B 359 SITE 1 AC2 17 PHE B 76 GLU B 233 PHE B 264 SER B 306 SITE 2 AC2 17 ALA B 307 LEU B 308 ALA B 318 ILE B 321 SITE 3 AC2 17 TYR B 326 SER B 327 GLY B 328 GLY B 330 SITE 4 AC2 17 GLY B 331 GLN B 332 ALA B 356 ARG B 362 SITE 5 AC2 17 HOH B 508 CRYST1 80.157 111.337 179.430 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012476 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005573 0.00000