HEADER STRUCTURAL PROTEIN 27-DEC-06 2ODV TITLE CRYSTAL STRUCTURE OF A FRAGMENT OF THE PLAKIN DOMAIN OF PLECTIN, CYS TITLE 2 TO ALA MUTANT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECTIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 300-530; COMPND 5 SYNONYM: HD1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLEC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PLAKIN DOMAIN, SPECTRIN REPEAT, CYTOSKELETON, HEMIDESMOSOMES, KEYWDS 2 EPIDERMOLYSIS BULLOSA, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.DE PEREDA REVDAT 7 27-DEC-23 2ODV 1 REMARK REVDAT 6 20-OCT-21 2ODV 1 REMARK SEQADV REVDAT 5 13-JUL-11 2ODV 1 VERSN REVDAT 4 24-FEB-09 2ODV 1 VERSN REVDAT 3 15-MAY-07 2ODV 1 JRNL REVDAT 2 20-MAR-07 2ODV 1 TITLE REVDAT 1 13-MAR-07 2ODV 0 JRNL AUTH A.SONNENBERG,A.M.ROJAS,J.M.DE PEREDA JRNL TITL THE STRUCTURE OF A TANDEM PAIR OF SPECTRIN REPEATS OF JRNL TITL 2 PLECTIN REVEALS A MODULAR ORGANIZATION OF THE PLAKIN DOMAIN. JRNL REF J.MOL.BIOL. V. 368 1379 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17397861 JRNL DOI 10.1016/J.JMB.2007.02.090 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 14679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 764 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1061 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1793 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 34.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : 1.83000 REMARK 3 B33 (A**2) : -1.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.230 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.227 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1893 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2552 ; 1.545 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 227 ; 4.371 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;32.624 ;23.689 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 369 ;18.686 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;22.888 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1453 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 886 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1303 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 69 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 74 ; 0.211 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.214 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1161 ; 1.089 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1792 ; 1.593 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 836 ; 2.916 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 760 ; 4.434 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9120 26.5940 -3.8070 REMARK 3 T TENSOR REMARK 3 T11: 0.3999 T22: -0.0734 REMARK 3 T33: 0.2121 T12: -0.1179 REMARK 3 T13: 0.0621 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 21.7198 L22: 16.6042 REMARK 3 L33: 34.9733 L12: -13.6823 REMARK 3 L13: 20.2722 L23: -18.4686 REMARK 3 S TENSOR REMARK 3 S11: -0.6606 S12: 0.2762 S13: 1.1818 REMARK 3 S21: 0.0795 S22: -0.4949 S23: -0.8794 REMARK 3 S31: -1.2900 S32: 0.9295 S33: 1.1554 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 333 A 422 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6650 16.5290 4.9520 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: -0.1087 REMARK 3 T33: 0.1056 T12: -0.0027 REMARK 3 T13: 0.0287 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.6649 L22: 4.1895 REMARK 3 L33: 12.0561 L12: -2.8550 REMARK 3 L13: 4.9762 L23: -6.7118 REMARK 3 S TENSOR REMARK 3 S11: 0.2482 S12: -0.0657 S13: -0.0326 REMARK 3 S21: -0.5891 S22: 0.0274 S23: -0.0415 REMARK 3 S31: 0.5458 S32: -0.0984 S33: -0.2756 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 423 A 489 REMARK 3 ORIGIN FOR THE GROUP (A): 59.2410 -11.8580 37.1390 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.0040 REMARK 3 T33: 0.1259 T12: 0.0271 REMARK 3 T13: -0.0071 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 7.4568 L22: 5.2100 REMARK 3 L33: 3.0777 L12: -5.3594 REMARK 3 L13: 1.2030 L23: -0.6689 REMARK 3 S TENSOR REMARK 3 S11: -0.4227 S12: -1.0821 S13: -0.1909 REMARK 3 S21: 0.1746 S22: 0.5468 S23: -0.0770 REMARK 3 S31: 0.2579 S32: 0.0650 S33: -0.1241 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 490 A 520 REMARK 3 ORIGIN FOR THE GROUP (A): 64.6550 -7.0060 32.2100 REMARK 3 T TENSOR REMARK 3 T11: 0.1051 T22: -0.0269 REMARK 3 T33: 0.5027 T12: -0.0561 REMARK 3 T13: 0.0214 T23: -0.0399 REMARK 3 L TENSOR REMARK 3 L11: 16.3113 L22: 20.5060 REMARK 3 L33: 12.5668 L12: -16.7234 REMARK 3 L13: 11.5941 L23: -12.6904 REMARK 3 S TENSOR REMARK 3 S11: -0.3061 S12: -0.1784 S13: 1.2700 REMARK 3 S21: -0.3375 S22: -0.3428 S23: -1.7157 REMARK 3 S31: -0.0261 S32: 0.4030 S33: 0.6489 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ODV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785, 0.9185 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15444 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 39.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PHOSPHATE PH 4.6, 24% 1,2 REMARK 280 -PROPANEDIOL, 6% PEG 3000, 3% GLYCEROL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 77.31000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 13.25500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 77.31000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 13.25500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE MONOMERIC MOLECULE AS REMARK 300 PRESENTED IN THE COORDINATES REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 296 REMARK 465 SER A 297 REMARK 465 HIS A 298 REMARK 465 MET A 299 REMARK 465 ARG A 300 REMARK 465 ALA A 301 REMARK 465 ASN A 302 REMARK 465 ARG A 332 REMARK 465 ALA A 521 REMARK 465 GLY A 522 REMARK 465 VAL A 523 REMARK 465 ALA A 524 REMARK 465 ALA A 525 REMARK 465 PRO A 526 REMARK 465 ALA A 527 REMARK 465 THR A 528 REMARK 465 GLN A 529 REMARK 465 VAL A 530 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 333 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 334 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 412 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGO A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ODU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A FRAGMENT OF THE PLAKIN DOMAIN OF PLECTIN DBREF 2ODV A 300 530 UNP Q6S383 Q6S383_HUMAN 300 530 SEQADV 2ODV GLY A 296 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV SER A 297 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV HIS A 298 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV MET A 299 UNP Q6S383 CLONING ARTIFACT SEQADV 2ODV ALA A 420 UNP Q6S383 CYS 420 ENGINEERED MUTATION SEQADV 2ODV ALA A 435 UNP Q6S383 CYS 435 ENGINEERED MUTATION SEQADV 2ODV LYS A 506 UNP Q6S383 GLU 506 ENGINEERED MUTATION SEQRES 1 A 235 GLY SER HIS MET ARG ALA ASN GLU LEU GLN LEU ARG TRP SEQRES 2 A 235 GLN GLU TYR ARG GLU LEU VAL LEU LEU LEU LEU GLN TRP SEQRES 3 A 235 MET ARG HIS HIS THR ALA ALA PHE GLU GLU ARG ARG PHE SEQRES 4 A 235 PRO SER SER PHE GLU GLU ILE GLU ILE LEU TRP SER GLN SEQRES 5 A 235 PHE LEU LYS PHE LYS GLU MET GLU LEU PRO ALA LYS GLU SEQRES 6 A 235 ALA ASP LYS ASN ARG SER LYS GLY ILE TYR GLN SER LEU SEQRES 7 A 235 GLU GLY ALA VAL GLN ALA GLY GLN LEU LYS VAL PRO PRO SEQRES 8 A 235 GLY TYR HIS PRO LEU ASP VAL GLU LYS GLU TRP GLY LYS SEQRES 9 A 235 LEU HIS VAL ALA ILE LEU GLU ARG GLU LYS GLN LEU ARG SEQRES 10 A 235 SER GLU PHE GLU ARG LEU GLU ALA LEU GLN ARG ILE VAL SEQRES 11 A 235 THR LYS LEU GLN MET GLU ALA GLY LEU ALA GLU GLU GLN SEQRES 12 A 235 LEU ASN GLN ALA ASP ALA LEU LEU GLN SER ASP VAL ARG SEQRES 13 A 235 LEU LEU ALA ALA GLY LYS VAL PRO GLN ARG ALA GLY GLU SEQRES 14 A 235 VAL GLU ARG ASP LEU ASP LYS ALA ASP SER MET ILE ARG SEQRES 15 A 235 LEU LEU PHE ASN ASP VAL GLN THR LEU LYS ASP GLY ARG SEQRES 16 A 235 HIS PRO GLN GLY GLU GLN MET TYR ARG ARG VAL TYR ARG SEQRES 17 A 235 LEU HIS LYS ARG LEU VAL ALA ILE ARG THR GLU TYR ASN SEQRES 18 A 235 LEU ARG LEU LYS ALA GLY VAL ALA ALA PRO ALA THR GLN SEQRES 19 A 235 VAL HET PGO A1001 5 HETNAM PGO S-1,2-PROPANEDIOL FORMUL 2 PGO C3 H8 O2 FORMUL 3 HOH *52(H2 O) HELIX 1 1 GLU A 303 GLU A 331 1 29 HELIX 2 2 SER A 337 GLU A 355 1 19 HELIX 3 3 GLU A 355 ALA A 379 1 25 HELIX 4 4 HIS A 389 LEU A 453 1 65 HELIX 5 5 ARG A 461 GLY A 489 1 29 HELIX 6 6 GLN A 493 LEU A 519 1 27 SITE 1 AC1 4 GLU A 416 LYS A 427 MET A 430 GLU A 431 CRYST1 154.620 26.510 58.090 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.037722 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017215 0.00000