HEADER SUGAR BINDING PROTEIN 03-JAN-07 2OFD TITLE THE CRYSTAL STRUCTURE OF SCLEROTIUM ROLFSII LECTIN IN COMPLEX WITH N- TITLE 2 ACETYL-D-GALACTOSAMINE CAVEAT 2OFD NGA A 144 HAS WRONG CHIRALITY AT ATOM C1 NGA B 144 HAS WRONG CAVEAT 2 2OFD CHIRALITY AT ATOM C1 NGA B 145 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 2OFD C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCLEROTIUM ROLFSII LECTIN; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ATHELIA ROLFSII; SOURCE 3 ORGANISM_TAXID: 39291 KEYWDS LECTIN, DUAL SPECIFICITY, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.D.LEONIDAS,S.E.ZOGRAPHOS,N.G.OIKONOMAKOS REVDAT 4 30-AUG-23 2OFD 1 HETSYN REVDAT 3 29-JUL-20 2OFD 1 CAVEAT COMPND REMARK HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 24-FEB-09 2OFD 1 VERSN REVDAT 1 01-MAY-07 2OFD 0 JRNL AUTH D.D.LEONIDAS,B.M.SWAMY,G.N.HATZOPOULOS,S.J.GONCHIGAR, JRNL AUTH 2 V.B.CHACHADI,S.R.INAMDAR,S.E.ZOGRAPHOS,N.G.OIKONOMAKOS JRNL TITL STRUCTURAL BASIS FOR THE CARBOHYDRATE RECOGNITION OF THE JRNL TITL 2 SCLEROTIUM ROLFSII LECTIN JRNL REF J.MOL.BIOL. V. 368 1145 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17391699 JRNL DOI 10.1016/J.JMB.2007.02.092 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 21504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1171 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1790 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2274 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.56000 REMARK 3 B22 (A**2) : 0.56000 REMARK 3 B33 (A**2) : -1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.951 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2380 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3228 ; 1.050 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 6.035 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;33.020 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 370 ;12.604 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ; 9.826 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1850 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 894 ; 0.177 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1586 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.121 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.166 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.160 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1462 ; 0.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2252 ; 0.896 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1078 ; 1.357 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 976 ; 2.075 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4600 5.5157 28.9798 REMARK 3 T TENSOR REMARK 3 T11: -0.0066 T22: -0.0569 REMARK 3 T33: -0.0108 T12: 0.0069 REMARK 3 T13: -0.0060 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.6369 L22: 0.6775 REMARK 3 L33: 1.0211 L12: 0.1093 REMARK 3 L13: 0.3544 L23: -0.0346 REMARK 3 S TENSOR REMARK 3 S11: 0.0464 S12: -0.0334 S13: -0.0204 REMARK 3 S21: 0.0033 S22: -0.0029 S23: -0.0151 REMARK 3 S31: 0.0832 S32: 0.0250 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 141 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3611 23.7313 13.7325 REMARK 3 T TENSOR REMARK 3 T11: -0.0012 T22: -0.0367 REMARK 3 T33: -0.0257 T12: -0.0074 REMARK 3 T13: 0.0128 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.5275 L22: 0.4410 REMARK 3 L33: 0.8058 L12: -0.1437 REMARK 3 L13: 0.1752 L23: 0.0854 REMARK 3 S TENSOR REMARK 3 S11: -0.0151 S12: -0.0026 S13: -0.0208 REMARK 3 S21: -0.0581 S22: 0.0284 S23: 0.0140 REMARK 3 S31: -0.0638 S32: 0.0080 S33: -0.0133 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8128 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22675 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17800 REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2OFC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 30 % MPD, 0.1 REMARK 280 M TRIS/HCL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.74250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.74250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.00350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.74250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.74250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.00350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.74250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.74250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.00350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.74250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.74250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.00350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY OF SRL IS A DIMER AND IT IS REMARK 300 INCLUDED IN THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 64.00700 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1020 O HOH B 1047 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 97 -51.78 -141.38 REMARK 500 PRO B 13 5.39 -66.14 REMARK 500 GLU B 86 71.57 -104.32 REMARK 500 SER B 97 -33.83 -136.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OFC RELATED DB: PDB REMARK 900 THE FREE STRUCTURE OF SRL REMARK 900 RELATED ID: 2OFE RELATED DB: PDB REMARK 900 THE STRUCTURE OF SRL IN COMPLEX WITH N-ACETYL-D-GLUCOSAMINE REMARK 999 REMARK 999 SEQUENCE REMARK 999 AT THE TIME OF PROCESSING, THE SEQUENCE OF THIS PROTEIN IS REMARK 999 NOT AVAILABLE AT THE UNP SEQUENCE DATABASE. DBREF 2OFD A 0 141 PDB 2OFD 2OFD 0 141 DBREF 2OFD B 0 141 PDB 2OFD 2OFD 0 141 SEQRES 1 A 142 ACE THR TYR LYS ILE THR VAL ARG VAL TYR GLN THR ASN SEQRES 2 A 142 PRO ASN ALA PHE PHE HIS PRO VAL GLU LYS THR VAL TRP SEQRES 3 A 142 LYS TYR ALA ASN GLY GLY THR TRP THR ILE THR ASP ASP SEQRES 4 A 142 GLN HIS VAL LEU THR MET GLY GLY SER GLY THR SER GLY SEQRES 5 A 142 THR LEU ARG PHE HIS ALA ASP ASN GLY GLU SER PHE THR SEQRES 6 A 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 A 142 ILE VAL THR ASN LEU ALA ALA ASP GLU THR GLY MET VAL SEQRES 8 A 142 ILE ASN GLN GLN TYR TYR SER GLN LYS ASN ARG GLU GLU SEQRES 9 A 142 ALA ARG GLU ARG GLN LEU SER ASN TYR GLU VAL LYS ASN SEQRES 10 A 142 ALA LYS GLY ARG ASN PHE GLU ILE VAL TYR THR GLU ALA SEQRES 11 A 142 GLU GLY ASN ASP LEU HIS ALA ASN LEU ILE ILE GLY SEQRES 1 B 142 ACE THR TYR LYS ILE THR VAL ARG VAL TYR GLN THR ASN SEQRES 2 B 142 PRO ASN ALA PHE PHE HIS PRO VAL GLU LYS THR VAL TRP SEQRES 3 B 142 LYS TYR ALA ASN GLY GLY THR TRP THR ILE THR ASP ASP SEQRES 4 B 142 GLN HIS VAL LEU THR MET GLY GLY SER GLY THR SER GLY SEQRES 5 B 142 THR LEU ARG PHE HIS ALA ASP ASN GLY GLU SER PHE THR SEQRES 6 B 142 ALA THR PHE GLY VAL HIS ASN TYR LYS ARG TRP CYS ASP SEQRES 7 B 142 ILE VAL THR ASN LEU ALA ALA ASP GLU THR GLY MET VAL SEQRES 8 B 142 ILE ASN GLN GLN TYR TYR SER GLN LYS ASN ARG GLU GLU SEQRES 9 B 142 ALA ARG GLU ARG GLN LEU SER ASN TYR GLU VAL LYS ASN SEQRES 10 B 142 ALA LYS GLY ARG ASN PHE GLU ILE VAL TYR THR GLU ALA SEQRES 11 B 142 GLU GLY ASN ASP LEU HIS ALA ASN LEU ILE ILE GLY HET ACE A 0 3 HET ACE B 0 3 HET NGA A 144 15 HET ACT A 997 4 HET NGA B 144 15 HET NGA B 145 15 HET ACT B 995 4 HET ACT B 996 4 HETNAM ACE ACETYL GROUP HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM ACT ACETATE ION HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE FORMUL 1 ACE 2(C2 H4 O) FORMUL 3 NGA 3(C8 H15 N O6) FORMUL 4 ACT 3(C2 H3 O2 1-) FORMUL 9 HOH *193(H2 O) HELIX 1 1 THR A 87 TYR A 95 1 9 HELIX 2 2 GLN A 98 ARG A 107 1 10 HELIX 3 3 THR B 87 TYR B 95 1 9 HELIX 4 4 GLN B 98 ARG B 107 1 10 SHEET 1 A 6 GLY A 31 THR A 36 0 SHEET 2 A 6 GLN A 39 MET A 44 -1 O THR A 43 N THR A 32 SHEET 3 A 6 TYR A 2 GLN A 10 -1 N ILE A 4 O LEU A 42 SHEET 4 A 6 ASP A 133 ILE A 140 1 O LEU A 138 N TYR A 9 SHEET 5 A 6 ASN A 121 GLU A 128 -1 N GLU A 123 O ILE A 139 SHEET 6 A 6 ASN A 111 LYS A 115 -1 N TYR A 112 O ILE A 124 SHEET 1 B 4 PHE A 17 VAL A 24 0 SHEET 2 B 4 SER A 50 ALA A 57 -1 O ARG A 54 N VAL A 20 SHEET 3 B 4 SER A 62 HIS A 70 -1 O ALA A 65 N LEU A 53 SHEET 4 B 4 LYS A 73 THR A 80 -1 O LYS A 73 N HIS A 70 SHEET 1 C 6 GLY B 31 THR B 36 0 SHEET 2 C 6 GLN B 39 MET B 44 -1 O VAL B 41 N THR B 34 SHEET 3 C 6 TYR B 2 GLN B 10 -1 N VAL B 6 O HIS B 40 SHEET 4 C 6 ASP B 133 ILE B 140 1 O LEU B 138 N ARG B 7 SHEET 5 C 6 ASN B 121 GLU B 128 -1 N VAL B 125 O ASN B 137 SHEET 6 C 6 ASN B 111 LYS B 115 -1 N TYR B 112 O ILE B 124 SHEET 1 D 4 PHE B 17 VAL B 24 0 SHEET 2 D 4 SER B 50 ALA B 57 -1 O ARG B 54 N VAL B 20 SHEET 3 D 4 SER B 62 HIS B 70 -1 O ALA B 65 N LEU B 53 SHEET 4 D 4 LYS B 73 THR B 80 -1 O LYS B 73 N HIS B 70 LINK C ACE A 0 N THR A 1 1555 1555 1.33 LINK C ACE B 0 N THR B 1 1555 1555 1.33 CRYST1 99.485 99.485 64.007 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010052 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010052 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015623 0.00000 HETATM 1 C ACE A 0 14.739 -1.913 21.249 1.00 21.20 C HETATM 2 O ACE A 0 15.912 -2.292 21.226 1.00 21.47 O HETATM 3 CH3 ACE A 0 13.581 -2.865 21.090 1.00 21.48 C