HEADER DNA BINDING PROTEIN/DNA 04-JAN-07 2OG0 TITLE CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*TP*AP*TP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*T) COMPND 3 -3'; COMPND 4 CHAIN: C; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'-D(*AP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*AP*TP*AP*C) COMPND 8 -3'; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: EXCISIONASE; COMPND 13 CHAIN: A, B; COMPND 14 FRAGMENT: XIS (RESIDUES: 1-55); COMPND 15 ENGINEERED: YES; COMPND 16 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 7 ORGANISM_TAXID: 10710; SOURCE 8 STRAIN: VIRUS; SOURCE 9 GENE: XIS; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS PROTEIN-DNA COMPLEX, DNA ARCHITECTURAL PROTEIN, 'WINGED'HELIX KEYWDS 2 PROTEIN, PHAGE EXCISION, SITE-SPECIFIC RECOMBINATION RECOMBINATION, KEYWDS 3 DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.V.PAPAGIANNIS,M.D.SAM,M.A.ABBANI,D.CASCIO,D.YOO,R.T.CLUBB, AUTHOR 2 R.C.JOHNSON REVDAT 7 30-AUG-23 2OG0 1 REMARK REVDAT 6 20-OCT-21 2OG0 1 SEQADV REVDAT 5 04-APR-18 2OG0 1 REMARK REVDAT 4 18-OCT-17 2OG0 1 REMARK REVDAT 3 13-JUL-11 2OG0 1 VERSN REVDAT 2 24-FEB-09 2OG0 1 VERSN REVDAT 1 13-MAR-07 2OG0 0 JRNL AUTH C.V.PAPAGIANNIS,M.D.SAM,M.A.ABBANI,D.YOO,D.CASCIO,R.T.CLUBB, JRNL AUTH 2 R.C.JOHNSON JRNL TITL FIS TARGETS ASSEMBLY OF THE XIS NUCLEOPROTEIN FILAMENT TO JRNL TITL 2 PROMOTE EXCISIVE RECOMBINATION BY PHAGE LAMBDA. JRNL REF J.MOL.BIOL. V. 367 328 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17275024 JRNL DOI 10.1016/J.JMB.2006.12.071 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 15573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 779 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 909 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.3850 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.5010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 898 REMARK 3 NUCLEIC ACID ATOMS : 732 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 37.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.33000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -1.99000 REMARK 3 B12 (A**2) : 0.66000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.182 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1742 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1029 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2507 ; 2.170 ; 2.478 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2491 ; 1.229 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 101 ; 5.634 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;30.682 ;20.385 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 166 ;17.288 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.833 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 268 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1362 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 225 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 249 ; 0.183 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1097 ; 0.219 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 679 ; 0.212 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 674 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 152 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.206 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.263 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.209 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 665 ; 1.200 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 198 ; 0.287 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 848 ; 1.433 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1623 ; 2.342 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1659 ; 3.113 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 51 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5830 31.6280 42.4770 REMARK 3 T TENSOR REMARK 3 T11: -0.1284 T22: -0.1392 REMARK 3 T33: -0.2021 T12: -0.0460 REMARK 3 T13: 0.0140 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 7.7978 L22: 7.1743 REMARK 3 L33: 6.5108 L12: -3.0741 REMARK 3 L13: -2.8703 L23: 2.8803 REMARK 3 S TENSOR REMARK 3 S11: -0.1314 S12: 0.1820 S13: 0.1884 REMARK 3 S21: -0.6518 S22: 0.2829 S23: -0.2895 REMARK 3 S31: -0.4242 S32: 0.2165 S33: -0.1516 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 52 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7970 36.1210 12.2460 REMARK 3 T TENSOR REMARK 3 T11: -0.0703 T22: -0.1306 REMARK 3 T33: -0.0661 T12: -0.0012 REMARK 3 T13: -0.0311 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 3.7392 L22: 2.6174 REMARK 3 L33: 2.1326 L12: -0.2019 REMARK 3 L13: 0.7554 L23: 0.1753 REMARK 3 S TENSOR REMARK 3 S11: -0.0902 S12: -0.0642 S13: 0.1539 REMARK 3 S21: 0.0586 S22: 0.0319 S23: -0.0709 REMARK 3 S31: 0.0481 S32: 0.1538 S33: 0.0583 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 18 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4110 29.0090 11.7540 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0052 REMARK 3 T33: -0.0283 T12: 0.0039 REMARK 3 T13: 0.0101 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.9142 L22: 1.3366 REMARK 3 L33: 2.2845 L12: 0.3745 REMARK 3 L13: -0.0924 L23: -1.6786 REMARK 3 S TENSOR REMARK 3 S11: 0.0386 S12: -0.0542 S13: 0.0335 REMARK 3 S21: 0.0366 S22: 0.0823 S23: 0.0064 REMARK 3 S31: -0.1663 S32: -0.2335 S33: -0.1209 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 19 D 36 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3760 27.8640 12.2360 REMARK 3 T TENSOR REMARK 3 T11: -0.0211 T22: -0.0563 REMARK 3 T33: -0.0591 T12: -0.0135 REMARK 3 T13: 0.0120 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 1.2280 L22: 1.1807 REMARK 3 L33: 2.4562 L12: 0.1118 REMARK 3 L13: -1.3212 L23: -1.2208 REMARK 3 S TENSOR REMARK 3 S11: -0.0883 S12: 0.0125 S13: 0.0458 REMARK 3 S21: 0.0544 S22: 0.1361 S23: 0.1261 REMARK 3 S31: 0.1202 S32: -0.0625 S33: -0.0478 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041088. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15654 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 80.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 10.32 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : 0.40900 REMARK 200 FOR SHELL : 3.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 1RH6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% POLYETHYLENE GLYCOL MONOMETHYL REMARK 280 ETHER 2000, 0.2 M AMMONIUM SULFATE AND 0.1 M SODIUM ACETATE, PH REMARK 280 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.74150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.59391 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.53767 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 28.74150 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 16.59391 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.53767 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 28.74150 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 16.59391 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.53767 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.18783 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 109.07533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.18783 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 109.07533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.18783 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 109.07533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 52 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 8 N7 DG C 8 C8 -0.037 REMARK 500 DG C 11 O3' DG C 11 C3' -0.037 REMARK 500 DT C 14 P DT C 14 O5' 0.066 REMARK 500 DC D 29 O3' DC D 29 C3' -0.039 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 1 O4' - C1' - N9 ANGL. DEV. = 5.3 DEGREES REMARK 500 DT C 2 C4 - C5 - C7 ANGL. DEV. = 4.8 DEGREES REMARK 500 DA C 3 O4' - C1' - N9 ANGL. DEV. = -5.6 DEGREES REMARK 500 DT C 4 O4' - C1' - N1 ANGL. DEV. = -6.0 DEGREES REMARK 500 DT C 5 C4 - C5 - C7 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT C 5 C6 - C5 - C7 ANGL. DEV. = -4.2 DEGREES REMARK 500 DT C 7 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG C 8 O5' - P - OP2 ANGL. DEV. = -5.8 DEGREES REMARK 500 DG C 8 C3' - O3' - P ANGL. DEV. = 9.0 DEGREES REMARK 500 DA C 10 O4' - C4' - C3' ANGL. DEV. = 3.6 DEGREES REMARK 500 DA C 10 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DA C 10 O4' - C1' - C2' ANGL. DEV. = 3.5 DEGREES REMARK 500 DA C 10 C6 - N1 - C2 ANGL. DEV. = 4.9 DEGREES REMARK 500 DA C 10 C5 - C6 - N1 ANGL. DEV. = -3.5 DEGREES REMARK 500 DG C 11 O5' - P - OP1 ANGL. DEV. = 7.3 DEGREES REMARK 500 DG C 11 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT C 12 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT C 12 N3 - C2 - O2 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT C 12 N3 - C4 - O4 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT C 12 C5 - C4 - O4 ANGL. DEV. = -5.7 DEGREES REMARK 500 DC C 13 OP1 - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 DC C 13 O5' - P - OP2 ANGL. DEV. = -5.6 DEGREES REMARK 500 DC C 13 O4' - C4' - C3' ANGL. DEV. = -2.4 DEGREES REMARK 500 DC C 13 N3 - C2 - O2 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT C 14 P - O5' - C5' ANGL. DEV. = 9.9 DEGREES REMARK 500 DG C 15 O4' - C1' - N9 ANGL. DEV. = 6.7 DEGREES REMARK 500 DG C 15 C2 - N3 - C4 ANGL. DEV. = -3.1 DEGREES REMARK 500 DT C 16 O4' - C1' - N1 ANGL. DEV. = -6.0 DEGREES REMARK 500 DT C 17 C4 - C5 - C7 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT C 17 C6 - C5 - C7 ANGL. DEV. = -3.6 DEGREES REMARK 500 DT C 18 P - O5' - C5' ANGL. DEV. = -9.7 DEGREES REMARK 500 DT C 18 O4' - C1' - N1 ANGL. DEV. = -7.2 DEGREES REMARK 500 DA D 19 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA D 20 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 DC D 22 O4' - C1' - N1 ANGL. DEV. = -5.6 DEGREES REMARK 500 DC D 22 C2 - N3 - C4 ANGL. DEV. = 4.3 DEGREES REMARK 500 DA D 23 O5' - P - OP2 ANGL. DEV. = -7.1 DEGREES REMARK 500 DG D 24 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT D 27 C4 - C5 - C7 ANGL. DEV. = 5.8 DEGREES REMARK 500 DT D 27 C6 - C5 - C7 ANGL. DEV. = -4.7 DEGREES REMARK 500 DA D 28 N1 - C6 - N6 ANGL. DEV. = 3.8 DEGREES REMARK 500 DC D 29 C1' - O4' - C4' ANGL. DEV. = -6.6 DEGREES REMARK 500 DT D 31 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA D 32 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA D 33 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 2OG0 A 1 52 UNP P03699 VXIS_LAMBD 1 52 DBREF 2OG0 B 1 52 UNP P03699 VXIS_LAMBD 1 52 DBREF 2OG0 C 1 18 PDB 2OG0 2OG0 1 18 DBREF 2OG0 D 19 36 PDB 2OG0 2OG0 19 36 SEQADV 2OG0 SER A 28 UNP P03699 CYS 28 ENGINEERED MUTATION SEQADV 2OG0 SER B 28 UNP P03699 CYS 28 ENGINEERED MUTATION SEQRES 1 C 18 DG DT DA DT DT DA DT DG DT DA DG DT DC SEQRES 2 C 18 DT DG DT DT DT SEQRES 1 D 18 DA DA DA DC DA DG DA DC DT DA DC DA DT SEQRES 2 D 18 DA DA DT DA DC SEQRES 1 A 52 MET TYR LEU THR LEU GLN GLU TRP ASN ALA ARG GLN ARG SEQRES 2 A 52 ARG PRO ARG SER LEU GLU THR VAL ARG ARG TRP VAL ARG SEQRES 3 A 52 GLU SER ARG ILE PHE PRO PRO PRO VAL LYS ASP GLY ARG SEQRES 4 A 52 GLU TYR LEU PHE HIS GLU SER ALA VAL LYS VAL ASP LEU SEQRES 1 B 52 MET TYR LEU THR LEU GLN GLU TRP ASN ALA ARG GLN ARG SEQRES 2 B 52 ARG PRO ARG SER LEU GLU THR VAL ARG ARG TRP VAL ARG SEQRES 3 B 52 GLU SER ARG ILE PHE PRO PRO PRO VAL LYS ASP GLY ARG SEQRES 4 B 52 GLU TYR LEU PHE HIS GLU SER ALA VAL LYS VAL ASP LEU FORMUL 5 HOH *174(H2 O) HELIX 1 1 LEU A 5 ARG A 11 1 7 HELIX 2 2 SER A 17 GLU A 27 1 11 HELIX 3 3 LEU B 5 ARG B 11 1 7 HELIX 4 4 SER B 17 GLU B 27 1 11 SHEET 1 A 3 TYR A 2 THR A 4 0 SHEET 2 A 3 GLU A 40 HIS A 44 -1 O PHE A 43 N LEU A 3 SHEET 3 A 3 VAL A 35 ASP A 37 -1 N ASP A 37 O GLU A 40 SHEET 1 B 2 ILE A 30 PHE A 31 0 SHEET 2 B 2 VAL A 48 LYS A 49 -1 O VAL A 48 N PHE A 31 SHEET 1 C 3 LEU B 3 THR B 4 0 SHEET 2 C 3 GLU B 40 PHE B 43 -1 O PHE B 43 N LEU B 3 SHEET 3 C 3 VAL B 35 ASP B 37 -1 N VAL B 35 O LEU B 42 SHEET 1 D 2 ILE B 30 PHE B 31 0 SHEET 2 D 2 VAL B 48 LYS B 49 -1 O VAL B 48 N PHE B 31 CISPEP 1 PHE A 31 PRO A 32 0 -8.01 CISPEP 2 PHE B 31 PRO B 32 0 -0.32 CRYST1 57.483 57.483 163.613 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017396 0.010044 0.000000 0.00000 SCALE2 0.000000 0.020088 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006112 0.00000